Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g06010.t01
CDS Infomation

cds chromosome:12X:18_random:4590096:4608875:1 gene:VIT_18s0001g06010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGGCGATCTCGAACTTTCCGGCGGCTCACCGGCATCGCGCAGCGCCAGTGGGGGTT
TCGGAGGCGGGGAAGTTTGGGTTTCGGTCGGCGGTGGCTTCGGTGCCGTTCCAGGATGAT
ATATTTTGGCGTTCTCAGTCAGCTCTTAGTCACTCAAGGAAGGCAGCTAAATATCCAAGT
GTTCAAATGGCATTAGTCGATGAGAGGGTTGCACATGGTAGAAATCTGGCAAAACCTTCC
AGAATTTTGGCATATGATCTTGTTCAAGGACCACTTGTAAGATGGAGTTCTATTGCAGAC
AAGTCAATTCCTGATCCTCCAACAGCTGTTCTTGTGCATGGCATTCTAGGTAGCCGGAAG
AACTGGGGTACCTTTGCTCGGAGATTGGCCCAGGCATTTCCAACATGGCAGTTTCTCTCA
GTAGACCTGCGGTGCCATGGTGATTCAGCATCAATTAGTAAGAGGGGCCCTCATACTGTT
GCTGCAGCTGCTCTTGATGTCCTAAAGCTAGTTGCACAGCTTAGAATAACACCTCGAGTT
CTAGTTGGTCACAGCTTTGGAGGAAAAGTTGTCTTGAGCATGGTGGAACAAGCTGCAAAA
CCTCTTGCACGACCAGTCAGAGTTTGGGTTCTAGATGCAACTCCTGGGAAAGTTCGTCCT
GGTGGAGATGGAGAGGATCATCCAGAGGAACTAATATCTTTCCTTAGTAAAATGCCCAAT
GAGGTGTTTTCAAAGCGGGATGTTATGAATGCTCTTATTAAAGAAGGATTTTCCAAAGAT
GTGGCACAGTGGGTGGTAACAAACCTCCAACAGACCAGTTCCCCTGGTTCATCATCGCCA
AGCTTCTCATGGGTGTTTGACCTCAAGGGAATTGCTGAGATGTATCAATCCTATGAAGAA
ACAAATTTATGGAATATTGTGGAAGATGTACCACGGGGTGTGCATGTGAATTTTTTGAAA
GCAGAAAGGAGCTTGCACAGGTGGGCCCTTGAGGATCTTCAGAGGATTCATGCTGCTGAG
GATCTGGCTGCTGATGAAGGTGGTGGAGTGGAAATGCATGTTCTTGAAGATGCTGGTCAT
TGGGTGCACGCTGATAACCCAGATGGCCTCTTCAGGATTCTCTCCTCTTCCTTCCAAGGA
ATCAAAACCTAA

Peptide Sequence

PEP ID

VIT_18s0001g06010.t01
PEP Infomation

pep chromosome:12X:18_random:4590096:4608875:1 gene:VIT_18s0001g06010 transcript:VIT_18s0001g06010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSAISNFPAAHRHRAAPVGVSEAGKFGFRSAVASVPFQDDIFWRSQSALSHSRKAAKYPS
VQMALVDERVAHGRNLAKPSRILAYDLVQGPLVRWSSIADKSIPDPPTAVLVHGILGSRK
NWGTFARRLAQAFPTWQFLSVDLRCHGDSASISKRGPHTVAAAALDVLKLVAQLRITPRV
LVGHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGKVRPGGDGEDHPEELISFLSKMPN
EVFSKRDVMNALIKEGFSKDVAQWVVTNLQQTSSPGSSSPSFSWVFDLKGIAEMYQSYEE
TNLWNIVEDVPRGVHVNFLKAERSLHRWALEDLQRIHAAEDLAADEGGGVEMHVLEDAGH
WVHADNPDGLFRILSSSFQGIKT

Transcript Sequence

Transcript ID

VIT_18s0001g06010.t01
Transcript Infomation

cdna chromosome:12X:18_random:4590096:4608875:1 gene:VIT_18s0001g06010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCATCGCCAGCTTCGATGTCTCCGCCTCCCATTTCCGGTTCTCCAGGACTCGTACAAA
CCCCTAATTCTGCTCCCCTGTCTTCACAAATTCCACACCTCCATTTCCACCAAAAAGTCG
CCGTTTGATTGATCCCTCACAATGTCGGCGATCTCGAACTTTCCGGCGGCTCACCGGCAT
CGCGCAGCGCCAGTGGGGGTTTCGGAGGCGGGGAAGTTTGGGTTTCGGTCGGCGGTGGCT
TCGGTGCCGTTCCAGGATGATATATTTTGGCGTTCTCAGTCAGCTCTTAGTCACTCAAGG
AAGGCAGCTAAATATCCAAGTGTTCAAATGGCATTAGTCGATGAGAGGGTTGCACATGGT
AGAAATCTGGCAAAACCTTCCAGAATTTTGGCATATGATCTTGTTCAAGGACCACTTGTA
AGATGGAGTTCTATTGCAGACAAGTCAATTCCTGATCCTCCAACAGCTGTTCTTGTGCAT
GGCATTCTAGGTAGCCGGAAGAACTGGGGTACCTTTGCTCGGAGATTGGCCCAGGCATTT
CCAACATGGCAGTTTCTCTCAGTAGACCTGCGGTGCCATGGTGATTCAGCATCAATTAGT
AAGAGGGGCCCTCATACTGTTGCTGCAGCTGCTCTTGATGTCCTAAAGCTAGTTGCACAG
CTTAGAATAACACCTCGAGTTCTAGTTGGTCACAGCTTTGGAGGAAAAGTTGTCTTGAGC
ATGGTGGAACAAGCTGCAAAACCTCTTGCACGACCAGTCAGAGTTTGGGTTCTAGATGCA
ACTCCTGGGAAAGTTCGTCCTGGTGGAGATGGAGAGGATCATCCAGAGGAACTAATATCT
TTCCTTAGTAAAATGCCCAATGAGGTGTTTTCAAAGCGGGATGTTATGAATGCTCTTATT
AAAGAAGGATTTTCCAAAGATGTGGCACAGTGGGTGGTAACAAACCTCCAACAGACCAGT
TCCCCTGGTTCATCATCGCCAAGCTTCTCATGGGTGTTTGACCTCAAGGGAATTGCTGAG
ATGTATCAATCCTATGAAGAAACAAATTTATGGAATATTGTGGAAGATGTACCACGGGGT
GTGCATGTGAATTTTTTGAAAGCAGAAAGGAGCTTGCACAGGTGGGCCCTTGAGGATCTT
CAGAGGATTCATGCTGCTGAGGATCTGGCTGCTGATGAAGGTGGTGGAGTGGAAATGCAT
GTTCTTGAAGATGCTGGTCATTGGGTGCACGCTGATAACCCAGATGGCCTCTTCAGGATT
CTCTCCTCTTCCTTCCAAGGAATCAAAACCTAACGAACTCCCGAATTTTCACTCCGGTTC
AGTGTCAGCATTCCTCAAGTTTTAACCAATCGTTGTTTACCGTCTTCATACATTTAGCTT
TTCTTTTCAAAATTTCTGCATTTGTTTGTATCATAATAGTTGTGCATATTCTTTTCTTCC
CATGTCTGTTCACCACAAGTCATCATTGGTTTGTCCCAATACTAAAGTGACCACTTCTTG
AATCAATCAGTTTTGTAATGCATAGCAAAGGTTTTATATACCATTAGGATCACCATCATG
GAAGTCCTGAATAAACGCGTTCGCTGGCTGCCAAAAATGGATTCTGGGAAAATTCTTTGA
AATTGCAGTAGCTGGAAGGAAACAGGAAGGAGGGAAAAAAAGGGGAAAGAAAAAGAAAAA
CTGGTTATCGGCTCAAAGGAGATGAGACAAGGAGACTTCCTATACGTATCTTTGGTTTCT
AGTGCTTCATTTGTACTGCTGGAGTATGTCTCATTTGAATCATGTCAACATATAGTGAAT
CATGTCAACATATGGTTTTTACCCAATA