Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05950.t01
CDS Infomation

cds chromosome:12X:18:4564102:4565743:-1 gene:VIT_18s0001g05950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCCGTGGAGAAGAAGCCTCATGCAGTTTGTATTCCATTCCCTGCTCAGGGCCAC
ATCAAGCCAATGCTAAACCTAGCAAAGCTCCTCCATTTCAGAGGCTTTCATATTACCTTC
GTCAACACAGAGTTCAACCACAGACGCTTGCTCAAGGCCCGGGGTCCCAACTCCCTCGAC
GGTCTCCCCTCCTTTCAGTTCGAAACCATTCCCGATGGTCTCCAACCGTCCGATGTCAAC
GCAACCCAAGACATCCCTTCCCTCTGCGTCTCCACCAAAAATAACTTATTGCCTCCGTTT
CGATGCCTTCTCTCCAAACTCAACCACAACGGTCCTCCCGTCACTTGCATAGTTTCTGAC
AGTTCATTGACCTCCACTCTGGACGCAGCTCAAGAACTGGGCATTCCCGGCCTTCTCTTT
TGGACGGCTAGCGCTTGTGGCTTCATGGGCTATGCGCACTATCGCACTCTCGTCAACAAG
GGTTTTATACCACTCAAAGATGCAAGTTACCTAACAAATGGGTACTTGGATACGGTTATT
GATTGGATACCGGGCATGAAAGGTATCCGTTTGAAGGACATGCCAAGCTTCGTTCGGACT
ACCGATCCAGATGATGTTATGTTGGGCTTTGCCATGGGTGAGATTGAAAGAGCTCGCAAG
GCTTCTGCCATCATTTTCAATACGTTTGACGCTTTAGAGCACGAGGTGTTGGATGCAATT
TCGACCATGTATCCTCCTATTTACACCATCGGCCCTATATCGCTACTCATGAATCAGATC
CAGGATAAAGATTTGAAGTCGATTGGATCAAATCTGTGGAAGGAAGATGAGGAGTGTCTC
CAATGGCTCGACTCCAAAGGACCCAACACGGTGGTCTACGTGAATTTTGGTAGCATCACA
GTCATGAAGCCGGAGCATCTGATCGAGTTTGCTTGGGGACTTTCAAATAGCAAACAAAAA
TTCTTATGGATAATTAGGCCAGATCTGGTGTCTGGTGCTTCGGCCATTCTTCCGCCCGAA
TTCCTGACAGAGACCAAAGATAGGGGTCTACTCGCAAGTTGGTGCTCTCAAGAGCAAGTT
CTGGGCCACCCAGCGGTAGGCGGGTTTTTAACCCACAACGGATGGAATTCCATCCTCGAA
AGTGTGTGTTGCGGAGTGGCAATGATTTGTTGGCCCTTTTTCGCAGAGCAGCAAACCAAC
TGCCGCTACTGTTGCACAGAATGGGGCATAGGTATGGAGATAGACGGTGACGTTAAGAGA
GATGATGTTGAGAGGCTTGTGAGAGAATTGATGGAGGGAGAGAAAGGCGAGGAGATGAAG
AAGAAGACCATGGAGTGGAAGAAGATTGCGCATGAGGCCACCACTGCTCCAAGTGGTTCC
TCGTTCTTCAACTTGGACAGAATGATCAAACAACTGCTTCTGTAG

Peptide Sequence

PEP ID

VIT_18s0001g05950.t01
PEP Infomation

pep chromosome:12X:18:4564102:4565743:-1 gene:VIT_18s0001g05950 transcript:VIT_18s0001g05950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSVEKKPHAVCIPFPAQGHIKPMLNLAKLLHFRGFHITFVNTEFNHRRLLKARGPNSLD
GLPSFQFETIPDGLQPSDVNATQDIPSLCVSTKNNLLPPFRCLLSKLNHNGPPVTCIVSD
SSLTSTLDAAQELGIPGLLFWTASACGFMGYAHYRTLVNKGFIPLKDASYLTNGYLDTVI
DWIPGMKGIRLKDMPSFVRTTDPDDVMLGFAMGEIERARKASAIIFNTFDALEHEVLDAI
STMYPPIYTIGPISLLMNQIQDKDLKSIGSNLWKEDEECLQWLDSKGPNTVVYVNFGSIT
VMKPEHLIEFAWGLSNSKQKFLWIIRPDLVSGASAILPPEFLTETKDRGLLASWCSQEQV
LGHPAVGGFLTHNGWNSILESVCCGVAMICWPFFAEQQTNCRYCCTEWGIGMEIDGDVKR
DDVERLVRELMEGEKGEEMKKKTMEWKKIAHEATTAPSGSSFFNLDRMIKQLLL

Transcript Sequence

Transcript ID

VIT_18s0001g05950.t01
Transcript Infomation

cdna chromosome:12X:18:4564102:4565743:-1 gene:VIT_18s0001g05950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAGAGAGCGAGAGAGCGAGTGTGAAAATGGGTTCCGTGGAGAAGAAGCCTCATGCAGT
TTGTATTCCATTCCCTGCTCAGGGCCACATCAAGCCAATGCTAAACCTAGCAAAGCTCCT
CCATTTCAGAGGCTTTCATATTACCTTCGTCAACACAGAGTTCAACCACAGACGCTTGCT
CAAGGCCCGGGGTCCCAACTCCCTCGACGGTCTCCCCTCCTTTCAGTTCGAAACCATTCC
CGATGGTCTCCAACCGTCCGATGTCAACGCAACCCAAGACATCCCTTCCCTCTGCGTCTC
CACCAAAAATAACTTATTGCCTCCGTTTCGATGCCTTCTCTCCAAACTCAACCACAACGG
TCCTCCCGTCACTTGCATAGTTTCTGACAGTTCATTGACCTCCACTCTGGACGCAGCTCA
AGAACTGGGCATTCCCGGCCTTCTCTTTTGGACGGCTAGCGCTTGTGGCTTCATGGGCTA
TGCGCACTATCGCACTCTCGTCAACAAGGGTTTTATACCACTCAAAGATGCAAGTTACCT
AACAAATGGGTACTTGGATACGGTTATTGATTGGATACCGGGCATGAAAGGTATCCGTTT
GAAGGACATGCCAAGCTTCGTTCGGACTACCGATCCAGATGATGTTATGTTGGGCTTTGC
CATGGGTGAGATTGAAAGAGCTCGCAAGGCTTCTGCCATCATTTTCAATACGTTTGACGC
TTTAGAGCACGAGGTGTTGGATGCAATTTCGACCATGTATCCTCCTATTTACACCATCGG
CCCTATATCGCTACTCATGAATCAGATCCAGGATAAAGATTTGAAGTCGATTGGATCAAA
TCTGTGGAAGGAAGATGAGGAGTGTCTCCAATGGCTCGACTCCAAAGGACCCAACACGGT
GGTCTACGTGAATTTTGGTAGCATCACAGTCATGAAGCCGGAGCATCTGATCGAGTTTGC
TTGGGGACTTTCAAATAGCAAACAAAAATTCTTATGGATAATTAGGCCAGATCTGGTGTC
TGGTGCTTCGGCCATTCTTCCGCCCGAATTCCTGACAGAGACCAAAGATAGGGGTCTACT
CGCAAGTTGGTGCTCTCAAGAGCAAGTTCTGGGCCACCCAGCGGTAGGCGGGTTTTTAAC
CCACAACGGATGGAATTCCATCCTCGAAAGTGTGTGTTGCGGAGTGGCAATGATTTGTTG
GCCCTTTTTCGCAGAGCAGCAAACCAACTGCCGCTACTGTTGCACAGAATGGGGCATAGG
TATGGAGATAGACGGTGACGTTAAGAGAGATGATGTTGAGAGGCTTGTGAGAGAATTGAT
GGAGGGAGAGAAAGGCGAGGAGATGAAGAAGAAGACCATGGAGTGGAAGAAGATTGCGCA
TGAGGCCACCACTGCTCCAAGTGGTTCCTCGTTCTTCAACTTGGACAGAATGATCAAACA
ACTGCTTCTGTAGGCTGGCATGTTATCACTTTTTACCTTCAAGTTACGTAGTTTATTTTC
TCCTCACTTTTTATTCCAGTTTCTTAATTTTC