Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05660.t01
CDS Infomation

cds chromosome:12X:18_random:4425069:4438499:-1 gene:VIT_18s0001g05660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAATCCGGACTCGGCCGATTCTCCCGCCGAGTTTCGACTCGGCCAGCGAGTCCAC
TCACTCGGTGACCCCCGCCGAATGGGCACAGTGAAGTACGTCGGACCCGTACAGGGCTAT
TCGGGCACGTGGGTCGGCGTCGACTGGGACAATGGCGACGCCAAACACGACGGCGCCCTA
GACGGACGCCGCTATTTCCAGGCGCACGCCGCCAAATCTGGGTCGTTCGTTCGCCCTCAC
AATCTATCGGCTGGGATTTCGCTGCTCCAAGCGCTACTTCTCCGGTACCGATCCACTACC
TCCAAGGAAGAGGAAGAGGAAATGTATGTCCTTTCAGCAAGCAACAGACGAGTATCTGTT
CAACTTGTGGGGAAAGAACAAATTGAAGACAAGCTAAGTCGATTTGAAGAGTTGACAGCT
GCTTCACTATCTTATTTAGGCGTTAGCTCTATTGGGGCCCCATTTGAGATCTGTAGTGTC
GTGCCAAATCTAAAGGAGCTAGATTTGACTGGCAATCTGCTTTCAGAATGGAAAGATGTT
GGAACTATCTGTGTACAGTTACCAGGCCTTGCAGCTCTAAACCTATCTAACAACCTTATG
GCACATGATATTACTGGGCTACCACTTCTAATGAACCTCCGGGTTCTGGTTTTAAACAAT
ACTGGCATTAAATGGAAGGAGGTTGAAATAATTAGGCATTCACTTCCAGCAATAGAAGAA
CTACATCTGATGGGAAACAATTTAAGGGCAATAACGCCTGCCTCTTCCTCTATTGTCCAA
GGATTTGATTATCTGCGGCTTCTGAATTTGGAAGATAACCATATAGCTGAATGGGATGAA
ATCTTAAAGCTTTCCCAGCTCAGAAGCTTGGAGCAGCTTCATTTGAACAAGAACCATTTG
AAGCACATATTTTACCCTGATTCTGATGCAATACATCAACTGCTCAACGGTATTGACTCT
CTTGAAAAAGGTTGTAAGCCCTTCCAGAATTTGCATTGTCTTCTTCTAGGTGGTAACAAC
ATCGAGGATCTGGCCTCTGTTGACTCGCTAAATTCTTTCCCTATGTTGAAGGATATTAGG
CTTTCTGAGAATCCAGTAGCTGATCCTGGAAGAGGTGGTATCCCAAGATTTGTTTTAATT
GCAAGGTTATCGAAAGTTGAAATACTGAATGGGAGTGAGGTCAGTCGTCGTGAGAGGAAG
GAATCTGAGATCCGGTATGTTCGCTTAGTCATATCAAAGATGCATGGCAACCCAGAAGAA
ATCACGCGGCTTCACCCCAGGTTTGCCGAGCTTAAAGAATTTCATGGAATCGAGGATGAA
AGACCCTTGACTGGAGCAGCTGGTCCTCAAAAAATGGCTTCTGGACTTCTTTCTATCAAT
CTGAAATGCATTGGAGCATCCATAGGCGAAAAGCCCCCGCTGACAAAGAAACTGCCAGCA
ACCACCACGATTGGCAAGCTAAAGAATCTTTGTGAGAGTTTCTTCAAATTGAAATCTATC
AAGCCGAGATTGTTTCTTCAAGAAGAGGGTTCCCCGTTGCCAATACTGCTTGACGATGAA
ATGGCATCACTGATGGACCTTGGAATCGGTAGTGAATCAACCATTCTCATAGATGAAGAG
AGTTGA

Peptide Sequence

PEP ID

VIT_18s0001g05660.t01
PEP Infomation

pep chromosome:12X:18_random:4425069:4438499:-1 gene:VIT_18s0001g05660 transcript:VIT_18s0001g05660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQNPDSADSPAEFRLGQRVHSLGDPRRMGTVKYVGPVQGYSGTWVGVDWDNGDAKHDGAL
DGRRYFQAHAAKSGSFVRPHNLSAGISLLQALLLRYRSTTSKEEEEEMYVLSASNRRVSV
QLVGKEQIEDKLSRFEELTAASLSYLGVSSIGAPFEICSVVPNLKELDLTGNLLSEWKDV
GTICVQLPGLAALNLSNNLMAHDITGLPLLMNLRVLVLNNTGIKWKEVEIIRHSLPAIEE
LHLMGNNLRAITPASSSIVQGFDYLRLLNLEDNHIAEWDEILKLSQLRSLEQLHLNKNHL
KHIFYPDSDAIHQLLNGIDSLEKGCKPFQNLHCLLLGGNNIEDLASVDSLNSFPMLKDIR
LSENPVADPGRGGIPRFVLIARLSKVEILNGSEVSRRERKESEIRYVRLVISKMHGNPEE
ITRLHPRFAELKEFHGIEDERPLTGAAGPQKMASGLLSINLKCIGASIGEKPPLTKKLPA
TTTIGKLKNLCESFFKLKSIKPRLFLQEEGSPLPILLDDEMASLMDLGIGSESTILIDEE
S

Transcript Sequence

Transcript ID

VIT_18s0001g05660.t01
Transcript Infomation

cdna chromosome:12X:18_random:4425069:4438499:-1 gene:VIT_18s0001g05660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGAAGAAGGTGAAGATGCAGAATCCGGACTCGGCCGATTCTCCCGCCGAGTTTCGACT
CGGCCAGCGAGTCCACTCACTCGGTGACCCCCGCCGAATGGGCACAGTGAAGTACGTCGG
ACCCGTACAGGGCTATTCGGGCACGTGGGTCGGCGTCGACTGGGACAATGGCGACGCCAA
ACACGACGGCGCCCTAGACGGACGCCGCTATTTCCAGGCGCACGCCGCCAAATCTGGGTC
GTTCGTTCGCCCTCACAATCTATCGGCTGGGATTTCGCTGCTCCAAGCGCTACTTCTCCG
GTACCGATCCACTACCTCCAAGGAAGAGGAAGAGGAAATGTATGTCCTTTCAGCAAGCAA
CAGACGAGTATCTGTTCAACTTGTGGGGAAAGAACAAATTGAAGACAAGCTAAGTCGATT
TGAAGAGTTGACAGCTGCTTCACTATCTTATTTAGGCGTTAGCTCTATTGGGGCCCCATT
TGAGATCTGTAGTGTCGTGCCAAATCTAAAGGAGCTAGATTTGACTGGCAATCTGCTTTC
AGAATGGAAAGATGTTGGAACTATCTGTGTACAGTTACCAGGCCTTGCAGCTCTAAACCT
ATCTAACAACCTTATGGCACATGATATTACTGGGCTACCACTTCTAATGAACCTCCGGGT
TCTGGTTTTAAACAATACTGGCATTAAATGGAAGGAGGTTGAAATAATTAGGCATTCACT
TCCAGCAATAGAAGAACTACATCTGATGGGAAACAATTTAAGGGCAATAACGCCTGCCTC
TTCCTCTATTGTCCAAGGATTTGATTATCTGCGGCTTCTGAATTTGGAAGATAACCATAT
AGCTGAATGGGATGAAATCTTAAAGCTTTCCCAGCTCAGAAGCTTGGAGCAGCTTCATTT
GAACAAGAACCATTTGAAGCACATATTTTACCCTGATTCTGATGCAATACATCAACTGCT
CAACGGTATTGACTCTCTTGAAAAAGGTTGTAAGCCCTTCCAGAATTTGCATTGTCTTCT
TCTAGGTGGTAACAACATCGAGGATCTGGCCTCTGTTGACTCGCTAAATTCTTTCCCTAT
GTTGAAGGATATTAGGCTTTCTGAGAATCCAGTAGCTGATCCTGGAAGAGGTGGTATCCC
AAGATTTGTTTTAATTGCAAGGTTATCGAAAGTTGAAATACTGAATGGGAGTGAGGTCAG
TCGTCGTGAGAGGAAGGAATCTGAGATCCGGTATGTTCGCTTAGTCATATCAAAGATGCA
TGGCAACCCAGAAGAAATCACGCGGCTTCACCCCAGGTTTGCCGAGCTTAAAGAATTTCA
TGGAATCGAGGATGAAAGACCCTTGACTGGAGCAGCTGGTCCTCAAAAAATGGCTTCTGG
ACTTCTTTCTATCAATCTGAAATGCATTGGAGCATCCATAGGCGAAAAGCCCCCGCTGAC
AAAGAAACTGCCAGCAACCACCACGATTGGCAAGCTAAAGAATCTTTGTGAGAGTTTCTT
CAAATTGAAATCTATCAAGCCGAGATTGTTTCTTCAAGAAGAGGGTTCCCCGTTGCCAAT
ACTGCTTGACGATGAAATGGCATCACTGATGGACCTTGGAATCGGTAGTGAATCAACCAT
TCTCATAGATGAAGAGAGTTGATGAAGGTAAATCCATGAAGCTCTTTGATGGACTTTGGA
ACTGGAAACAACCATCGAAGACAAGAAGAGTTGATGAACGTGAATCAACCCCAGAAACTT
CCATGATTCTTGTTGCAACATTTTGTCTAGTTCCAAGTGTTTGGATGGTACTTGTTTTTG
GATTTACAGACTTTCACATTCCTCAAATTTGTGTGTACCAGGTTGATGCTTTAAGATTTG
GGTTTTCTTGTTTTTATCTTCCCTTTTATTTTGATCTTTATTCAATTGTCAATTTAAATA
TGCTGTGTAACATTTAATGAGACAATTAGCAGAGAGTGAGAAGAAATATTTGTTACTGCT
G