Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05640.t01
CDS Infomation

cds chromosome:12X:18:4407516:4416666:1 gene:VIT_18s0001g05640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCCCGTCCGGTGATGGTGCCGGCGGAAGATGCGCGTGCTTTTCTTGGGAAAATGGT
GGTTCCGACCCCGACGATCCTCACTGTCCGCATTGTGGAGGATCGGATCCTTCTTCTTGC
TCTTCGATTCTCTCGAATTCGATACGGATTCAGGATTCGGAGAAGCTGTGGAGAATCGTC
ACGGCCTCGGCCAAGGGCTTCACTATTGGTGTCGGTATCAAAGGTGGCCTCGCTATATTC
TCGGTTGTAGCTAGGTTGATTGCTAGGTTGAGACGCAGAAGATTATCGGCATATGCGAGG
AAGTTTTCAAATAGTGAAGATGTGGTGATAGCTTTAAAAGAGACGCTCAGATACGGACTC
TTTCTTGGAACCTTTGCTGGTACATTTGTTTCAGTGGATGAGATTGTGGCTGCTTTGGGT
GGTCATCGTAGGACTGCTAGGTGGAGGTCTCTGTTAGCGGGGGCAATTGCAGGGCCTTCA
ATGCTTCTGTCCGGACCGAACACCCAACACACTACCTTGGCAATATACATCCTTATGCGG
GCTGCTGTCTTAGCATCACGTTGCGGAATAAAAAGTAAACGATTTGGACGTATTTGTAAA
CCTCTAACTTGGTCGCATGGTGACATATTTCTCATGTGTCTCTCATCTTCACAAATTTTG
TCTGCTTACATATTGAAGCAAGAGAGCTTGCCTCCATCATATAAATCCTTTCTCAATAAA
CATGGTGGAAAGGATCCCATTATCCTGCAAGCTGTGAAAGACATTGCAAGTGGCATTCCT
TTTACTAATTTGGAGGCAGTAGAGAATTATTACAACACCATTGGTGTTAAAATTAAACTA
GACCCATCAATGAAAGTCCCCTGCTCGATTATACATGGACATCAATCATGCAGCAAGCAT
GTTGTGTCTTTTCTTATTCAAGCTTACAAAAGAGCACTACCAGTTTATCTGCCTGTATAT
TTGATTCCTGCATTAATAGTTCATCGTCAAGACCTCTTGAAAAGGCCTTATACAATTTTG
GGAAAGGGTCTTCTTGGTACAGCAAGATCCAGCTTGTTCCTATCTGTATATTGTTCGTCT
GCCTGGATGTGGACTTGCCTGCTCTTCAGGATTTTAAAGAGATGTAATATTCCAATGGTG
GCAATGGGAACGTTCCCAACTGGCTTGGCCTTGGCTATTGAGAAGAAGAGCAGGCGAATT
GAGATATCACTTTACTGTCTCTCACGAGCTATAGAGAGCTTCTTCACATGCATGGTTGAT
GCTGGATACTTGCAACCATCAAAGAATCTGAAGAGAGCTGATGTTGTGATTTTCAGTTTA
TCAACAGCCATCATCATGCACTGCTATGCACAGGAGAGGGAAGTATTTCGATCTAAGTAC
TTGAATGTCCTTGACTGGGTATTTGGTGTGCCTCCTCCCCCAGATGAAACCCCGCGCTAC
AAGAATAGAAATGAAGGACTGCTGCTGAAGTTTCTGCTCGTCTTACTGTTCAGTTCCAAG
TTTGTAGTGGGGTTATACCAACTACCAAGTAAAGCTGGACATGGTGAGGTCAAACAGGGG
AATTTTTCCATAGAAGACACCTTCAAGGTGGAAGTGCAGGAGGGTGTCCTGGAACCCCAT
CAGGATTTGCCCAAGTCCAGCATCACTTATTCGGCCTCATTTCAAGTGTCTGCTTGGTCC
AAGGAGCGGAACATGCCTATGAACTATGAGGACCTTCTGCCCAATCTTTAA

Peptide Sequence

PEP ID

VIT_18s0001g05640.t01
PEP Infomation

pep chromosome:12X:18:4407516:4416666:1 gene:VIT_18s0001g05640 transcript:VIT_18s0001g05640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSPSGDGAGGRCACFSWENGGSDPDDPHCPHCGGSDPSSCSSILSNSIRIQDSEKLWRIV
TASAKGFTIGVGIKGGLAIFSVVARLIARLRRRRLSAYARKFSNSEDVVIALKETLRYGL
FLGTFAGTFVSVDEIVAALGGHRRTARWRSLLAGAIAGPSMLLSGPNTQHTTLAIYILMR
AAVLASRCGIKSKRFGRICKPLTWSHGDIFLMCLSSSQILSAYILKQESLPPSYKSFLNK
HGGKDPIILQAVKDIASGIPFTNLEAVENYYNTIGVKIKLDPSMKVPCSIIHGHQSCSKH
VVSFLIQAYKRALPVYLPVYLIPALIVHRQDLLKRPYTILGKGLLGTARSSLFLSVYCSS
AWMWTCLLFRILKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLSRAIESFFTCMVD
AGYLQPSKNLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLNVLDWVFGVPPPPDETPRY
KNRNEGLLLKFLLVLLFSSKFVVGLYQLPSKAGHGEVKQGNFSIEDTFKVEVQEGVLEPH
QDLPKSSITYSASFQVSAWSKERNMPMNYEDLLPNL

Transcript Sequence

Transcript ID

VIT_18s0001g05640.t01
Transcript Infomation

cdna chromosome:12X:18:4407516:4416666:1 gene:VIT_18s0001g05640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGTTTCTCACCTTCCAAGATCCAACTTCCGGCTGTCGACACTTGGCAGCTCCTGGAACC
CTAATTCTCCCCCATGTCCCCGTCCGGTGATGGTGCCGGCGGAAGATGCGCGTGCTTTTC
TTGGGAAAATGGTGGTTCCGACCCCGACGATCCTCACTGTCCGCATTGTGGAGGATCGGA
TCCTTCTTCTTGCTCTTCGATTCTCTCGAATTCGATACGGATTCAGGATTCGGAGAAGCT
GTGGAGAATCGTCACGGCCTCGGCCAAGGGCTTCACTATTGGTGTCGGTATCAAAGGTGG
CCTCGCTATATTCTCGGTTGTAGCTAGGTTGATTGCTAGGTTGAGACGCAGAAGATTATC
GGCATATGCGAGGAAGTTTTCAAATAGTGAAGATGTGGTGATAGCTTTAAAAGAGACGCT
CAGATACGGACTCTTTCTTGGAACCTTTGCTGGTACATTTGTTTCAGTGGATGAGATTGT
GGCTGCTTTGGGTGGTCATCGTAGGACTGCTAGGTGGAGGTCTCTGTTAGCGGGGGCAAT
TGCAGGGCCTTCAATGCTTCTGTCCGGACCGAACACCCAACACACTACCTTGGCAATATA
CATCCTTATGCGGGCTGCTGTCTTAGCATCACGTTGCGGAATAAAAAGTAAACGATTTGG
ACGTATTTGTAAACCTCTAACTTGGTCGCATGGTGACATATTTCTCATGTGTCTCTCATC
TTCACAAATTTTGTCTGCTTACATATTGAAGCAAGAGAGCTTGCCTCCATCATATAAATC
CTTTCTCAATAAACATGGTGGAAAGGATCCCATTATCCTGCAAGCTGTGAAAGACATTGC
AAGTGGCATTCCTTTTACTAATTTGGAGGCAGTAGAGAATTATTACAACACCATTGGTGT
TAAAATTAAACTAGACCCATCAATGAAAGTCCCCTGCTCGATTATACATGGACATCAATC
ATGCAGCAAGCATGTTGTGTCTTTTCTTATTCAAGCTTACAAAAGAGCACTACCAGTTTA
TCTGCCTGTATATTTGATTCCTGCATTAATAGTTCATCGTCAAGACCTCTTGAAAAGGCC
TTATACAATTTTGGGAAAGGGTCTTCTTGGTACAGCAAGATCCAGCTTGTTCCTATCTGT
ATATTGTTCGTCTGCCTGGATGTGGACTTGCCTGCTCTTCAGGATTTTAAAGAGATGTAA
TATTCCAATGGTGGCAATGGGAACGTTCCCAACTGGCTTGGCCTTGGCTATTGAGAAGAA
GAGCAGGCGAATTGAGATATCACTTTACTGTCTCTCACGAGCTATAGAGAGCTTCTTCAC
ATGCATGGTTGATGCTGGATACTTGCAACCATCAAAGAATCTGAAGAGAGCTGATGTTGT
GATTTTCAGTTTATCAACAGCCATCATCATGCACTGCTATGCACAGGAGAGGGAAGTATT
TCGATCTAAGTACTTGAATGTCCTTGACTGGGTATTTGGTGTGCCTCCTCCCCCAGATGA
AACCCCGCGCTACAAGAATAGAAATGAAGGACTGCTGCTGAAGTTTCTGCTCGTCTTACT
GTTCAGTTCCAAGTTTGTAGTGGGGTTATACCAACTACCAAGTAAAGCTGGACATGGTGA
GGTCAAACAGGGGAATTTTTCCATAGAAGACACCTTCAAGGTGGAAGTGCAGGAGGGTGT
CCTGGAACCCCATCAGGATTTGCCCAAGTCCAGCATCACTTATTCGGCCTCATTTCAAGT
GTCTGCTTGGTCCAAGGAGCGGAACATGCCTATGAACTATGAGGACCTTCTGCCCAATCT
TTAAGATATGTTTTTTGAGAAAGCGGGGATGGTCCGGATGGTGTCTATTGCTCATTTTCC
CCTTGGTCGAGCATGTTTGACTGCAGCATGGGAAGAGTCAGAACTTAGAAGCCTCCTATC
TCTCTCCAATTAACACGTATTATATACGGCCAGAAATAACTTCTAATGGCGACTACTAGT
CTACTACAAGTGAATCTCAAAGATGAATTACACTTAGGCAGGGGTGAATAGGTATTGTTG
AATAA