Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05630.t01
CDS Infomation

cds chromosome:12X:18_random:4401713:4413199:1 gene:VIT_18s0001g05630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAAGAAGAGGTCGTCGTCGTCGCCGGCGCCAGCCCCGCGCCGTCCGATCACAAG
CGGAAGCTCGAAGATTTGGAGCCCGAAGCCCCGGAGCAGGCGGAACCGGACGGTGTCCAG
GGCGCTGACGCGGGGGACTATGTGGCGAACGATGAGTCGGAGGCGAAGCGTCCTCGGGTC
GAGGACCAGGATGATGATTTAGCGACTGAGAATGGATACCAAAGGGAGAAAGAAGATGAG
GTCATAAAGGAAAATGTTGAACTGACTGTGGAGAATGCCCAATCACAGGAAGCTCCACAT
CCAACTGAGGAAGCTCCAGAGGCTGTGAATGATGAGCAACCTTCTACTGATAATGAGCAG
AAGGAGGATACCCAAGAACCCTCAATTGAGAATCCTCAGTTGGAAAATCCTCAGCAACCC
ACTGGAGAGGAATTTGAGAAACCTGCTGAGGAAATTCCTCAACAAGAGGTCGGGGATGTT
CCCTCTGCTGAAGTGCAACAGCAACCTACATCAGAGACTCAGACAATGTCACGGAAAATG
GAGGTCCCTAATAATAAGGTTGGGGTTCTTATTGGTAAAGCTGGCGATACTATACGGTTC
CTTCAGTACAACTCAGGGGCAAAAATCCAGATCACAAGGGATGCTGATGCAGATCCATAT
TCTGCCTCAAGGCCTGTAGAACTAATAGGAAGCTTGGAAAACATAAACAAGGCTGAGAAA
CTTATAAAGGATGTTATTGCAGAGGCTGATGCAGGGGGTTCTCCTTCCCTTGTAGCTAGA
GGTTTTGCTACTGCACAGGCTGTTGGGGCTGCAGAACAAGTTCAGATACAAGTTCCAAAT
GAGAAGGTTGGTTTAATCATAGGCAAAGGTGGGGAAACCATTAAAAGCCTGCAGACCAGA
TCAGGGGCTCGCATCCAGTTGATACCTCAACATCTCCCTGAAGGAGACCAATCTAAAGAA
AGGACTGTGAGAGTTACTGGTGACAAGAAGCAAATTGAGATGGCTAGAGAAATGATAAAG
GAAGTTATGAATCAGCCTGTGAGATCATCAACCTACCCAGGCAGTTATAACCAACAGGGC
TATCGACCTCGTGGTCCCACTGGACCATCTCAATGGGGCCCGCGGGGTCCACATCCTGGG
CAGCCAACAGGGTATGATTACCAACGAGGAGCTTATCCATCTCAGAATCAGCAGTATGCG
CCGCCTTCATATGGTGGTTATCCTCCACAACAAATGGCCCCAAGAAGCAGCTTTGGTTCA
GGGTGGGAGCAAAGGCCCCCTGCTAACATGCAGGGGCCTCCACAGAGTGGTGGCTATGAT
TTCTATGGTGGACAAGGAGGCCATGGTCCTGATGCCCCTGCTGCTGCTCCACATTCTGCT
TCTATGTCCATTCATGCACCTGGTCCTTCCCCCAGCCCTGGGATGGGTCCACCCCCTTCC
CAAGGAAATTACAATTATGGACAGCCACAGGGTCCAGATTATGGGCAACAGGCTCAGTAT
TCCCAAACAGGACCTCCTCAACAGGGCTATGGGCATGGATATGATGAACCAAAATATGAA
GGTCAGGCTCCAACACATCCTCCATATGGAGGACATGGTTCTCAGCCTGTTTACCCACAA
GGTGGTGCTCAATCAGGGTATCCCCCACAACAGCCATATGGTAAGCCACAATCATATGGC
ATGGCATCACAGGCACCAGCAGCACAATCCTATGGCCCACCTAGGGCTAGTCAACCTGGG
GATGTTCCTTATCAAGGTCCCATGTCTTCAAACCAATCATATGGTCCAAATGTACCTCCA
CAACAATACCCATATGCATCAAGTGGGCCCATGCAGCAATCTTATCCTGCTTATGGGTCT
CAACCAGCTGCTGATGGGTATAATCAGCCACAACCAGCATCCGGCCCAGGATATCCACAG
CAAGGTGGCCAGCCTATGTCAGGTTACAGTCAACCTGGTGGACAGCAGGCACCAGGCTAT
GCGCAAGTGGGTCCTCAAGGGGGTTATGGCCCATACCCTTCACAACCAGGATATGCTGAA
CAACAGACTGCAAACAATGCAGCTTATGGATACCAAGGGTCTGCAGATCCCACTTACAAC
AGTGGGCCTGCCTCAGCCTATGGTGCACAACCAAGTGGCCAGCCAGGTTATGTCCAACCA
ACGCCTACTCAGCCAAGCTATGATCAGTCAATCCCCGCACAGTCAGGTGGCTATGGAGCT
GTACCAGCAACTGCACCAGTTGGTTATGGAAAAAGTTTGTCACCCCAGCCAGGTTATCCT
CAGTATGATGCAACTCAGATGTATGGTGCGCATCGCTGA

Peptide Sequence

PEP ID

VIT_18s0001g05630.t01
PEP Infomation

pep chromosome:12X:18_random:4401713:4413199:1 gene:VIT_18s0001g05630 transcript:VIT_18s0001g05630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEEEVVVVAGASPAPSDHKRKLEDLEPEAPEQAEPDGVQGADAGDYVANDESEAKRPRV
EDQDDDLATENGYQREKEDEVIKENVELTVENAQSQEAPHPTEEAPEAVNDEQPSTDNEQ
KEDTQEPSIENPQLENPQQPTGEEFEKPAEEIPQQEVGDVPSAEVQQQPTSETQTMSRKM
EVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKAEK
LIKDVIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTR
SGARIQLIPQHLPEGDQSKERTVRVTGDKKQIEMAREMIKEVMNQPVRSSTYPGSYNQQG
YRPRGPTGPSQWGPRGPHPGQPTGYDYQRGAYPSQNQQYAPPSYGGYPPQQMAPRSSFGS
GWEQRPPANMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSIHAPGPSPSPGMGPPPS
QGNYNYGQPQGPDYGQQAQYSQTGPPQQGYGHGYDEPKYEGQAPTHPPYGGHGSQPVYPQ
GGAQSGYPPQQPYGKPQSYGMASQAPAAQSYGPPRASQPGDVPYQGPMSSNQSYGPNVPP
QQYPYASSGPMQQSYPAYGSQPAADGYNQPQPASGPGYPQQGGQPMSGYSQPGGQQAPGY
AQVGPQGGYGPYPSQPGYAEQQTANNAAYGYQGSADPTYNSGPASAYGAQPSGQPGYVQP
TPTQPSYDQSIPAQSGGYGAVPATAPVGYGKSLSPQPGYPQYDATQMYGAHR

Transcript Sequence

Transcript ID

VIT_18s0001g05630.t01
Transcript Infomation

cdna chromosome:12X:18_random:4401713:4413199:1 gene:VIT_18s0001g05630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACAAAACTAAACCCTAGCTTTCTTCTCTTTGTTACCCTATCTAGGGTTAGGGTTTACTC
GTCTCGGCCCAGTAGCACCTGTTTCCTGTGGATCACATGGCGGAAGAAGAGGTCGTCGTC
GTCGCCGGCGCCAGCCCCGCGCCGTCCGATCACAAGCGGAAGCTCGAAGATTTGGAGCCC
GAAGCCCCGGAGCAGGCGGAACCGGACGGTGTCCAGGGCGCTGACGCGGGGGACTATGTG
GCGAACGATGAGTCGGAGGCGAAGCGTCCTCGGGTCGAGGACCAGGATGATGATTTAGCG
ACTGAGAATGGATACCAAAGGGAGAAAGAAGATGAGGTCATAAAGGAAAATGTTGAACTG
ACTGTGGAGAATGCCCAATCACAGGAAGCTCCACATCCAACTGAGGAAGCTCCAGAGGCT
GTGAATGATGAGCAACCTTCTACTGATAATGAGCAGAAGGAGGATACCCAAGAACCCTCA
ATTGAGAATCCTCAGTTGGAAAATCCTCAGCAACCCACTGGAGAGGAATTTGAGAAACCT
GCTGAGGAAATTCCTCAACAAGAGGTCGGGGATGTTCCCTCTGCTGAAGTGCAACAGCAA
CCTACATCAGAGACTCAGACAATGTCACGGAAAATGGAGGTCCCTAATAATAAGGTTGGG
GTTCTTATTGGTAAAGCTGGCGATACTATACGGTTCCTTCAGTACAACTCAGGGGCAAAA
ATCCAGATCACAAGGGATGCTGATGCAGATCCATATTCTGCCTCAAGGCCTGTAGAACTA
ATAGGAAGCTTGGAAAACATAAACAAGGCTGAGAAACTTATAAAGGATGTTATTGCAGAG
GCTGATGCAGGGGGTTCTCCTTCCCTTGTAGCTAGAGGTTTTGCTACTGCACAGGCTGTT
GGGGCTGCAGAACAAGTTCAGATACAAGTTCCAAATGAGAAGGTTGGTTTAATCATAGGC
AAAGGTGGGGAAACCATTAAAAGCCTGCAGACCAGATCAGGGGCTCGCATCCAGTTGATA
CCTCAACATCTCCCTGAAGGAGACCAATCTAAAGAAAGGACTGTGAGAGTTACTGGTGAC
AAGAAGCAAATTGAGATGGCTAGAGAAATGATAAAGGAAGTTATGAATCAGCCTGTGAGA
TCATCAACCTACCCAGGCAGTTATAACCAACAGGGCTATCGACCTCGTGGTCCCACTGGA
CCATCTCAATGGGGCCCGCGGGGTCCACATCCTGGGCAGCCAACAGGGTATGATTACCAA
CGAGGAGCTTATCCATCTCAGAATCAGCAGTATGCGCCGCCTTCATATGGTGGTTATCCT
CCACAACAAATGGCCCCAAGAAGCAGCTTTGGTTCAGGGTGGGAGCAAAGGCCCCCTGCT
AACATGCAGGGGCCTCCACAGAGTGGTGGCTATGATTTCTATGGTGGACAAGGAGGCCAT
GGTCCTGATGCCCCTGCTGCTGCTCCACATTCTGCTTCTATGTCCATTCATGCACCTGGT
CCTTCCCCCAGCCCTGGGATGGGTCCACCCCCTTCCCAAGGAAATTACAATTATGGACAG
CCACAGGGTCCAGATTATGGGCAACAGGCTCAGTATTCCCAAACAGGACCTCCTCAACAG
GGCTATGGGCATGGATATGATGAACCAAAATATGAAGGTCAGGCTCCAACACATCCTCCA
TATGGAGGACATGGTTCTCAGCCTGTTTACCCACAAGGTGGTGCTCAATCAGGGTATCCC
CCACAACAGCCATATGGTAAGCCACAATCATATGGCATGGCATCACAGGCACCAGCAGCA
CAATCCTATGGCCCACCTAGGGCTAGTCAACCTGGGGATGTTCCTTATCAAGGTCCCATG
TCTTCAAACCAATCATATGGTCCAAATGTACCTCCACAACAATACCCATATGCATCAAGT
GGGCCCATGCAGCAATCTTATCCTGCTTATGGGTCTCAACCAGCTGCTGATGGGTATAAT
CAGCCACAACCAGCATCCGGCCCAGGATATCCACAGCAAGGTGGCCAGCCTATGTCAGGT
TACAGTCAACCTGGTGGACAGCAGGCACCAGGCTATGCGCAAGTGGGTCCTCAAGGGGGT
TATGGCCCATACCCTTCACAACCAGGATATGCTGAACAACAGACTGCAAACAATGCAGCT
TATGGATACCAAGGGTCTGCAGATCCCACTTACAACAGTGGGCCTGCCTCAGCCTATGGT
GCACAACCAAGTGGCCAGCCAGGTTATGTCCAACCAACGCCTACTCAGCCAAGCTATGAT
CAGTCAATCCCCGCACAGTCAGGTGGCTATGGAGCTGTACCAGCAACTGCACCAGTTGGT
TATGGAAAAAGTTTGTCACCCCAGCCAGGTTATCCTCAGTATGATGCAACTCAGATGTAT
GGTGCGCATCGCTGAACTGTTTTTTGATATAGTTCTTAGTTGAGTTTGACTGGAGATAGA
TGTTCTCAGTATCTAAAACACTTAAGACCTAGAGTTAGTGAATTCGTGTAGGGTTATTTC
TGACTGATATTGAGACTTCTAGGCCATGCTCTATTAATCCTGTTTCCAGATGATGTCATA
TGAACTAATCTTCTAAGTTTATTATCAATCTTATTGTTCTC