Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05600.t01
CDS Infomation

cds chromosome:12X:18:4390485:4398813:-1 gene:VIT_18s0001g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATAAGCTAGGGTTTTCGGGCCTCAAGAGCTTGGATCAATTCAAATCTTTATCAGGA
TCCATCCCTGGAACCGCAAAAACCTTTTCCGTTCCTGGTCGTCCATCTTCAGATTCGATC
ACATTAGGAAGTTTTGCGAATTTGAAGCTCACTGCAGAGAAATTGGTTAAAGAGCAAGCG
TCTGTGAAAACTGACCTTGAAATGGCGAATTCTAAGCTGAAGAAATCAATGGAGGATATC
CAGATATTGGAGGAAAAGTTGCAGTACGCTCTTAATGAGAATGCAAAGCTCAAAGTGAAG
CAGAAAGAGGATGAAAAGCTCTGGACAGGGTTGGAATCAAAATTCTTTTCAACAAAGACC
TTATGCGAGCAGCTCACTGAAACTTTGCAGCACTTGGCTTGCCAGGTTCAGGATGCTGAA
AAAGATAAGGAACTTTTCGAAGACAAACTATCTGCAAGTTCAGTGGCTTTTGATGGTTTA
AATGATCAGATGAATGGTCTGTCTTTGAAATTGGAGTCTGCGGAGGAAAGCATAAAAAAT
TATGAGAAAGAGCTGAAGGAACTTAAAATTCAGCAAGAGGAAAGGGAGCAGTTTCACAGA
GATGAGCAATGCAAAACTGCCAATCTCCTAGAGGAAAAAGATGCTATGATCAAGCAGTTT
GAAGCAACTGTAGCTGCTAGTAGGTTGGCCACAGAGAGCTTGAACTCTAAATTGGAAGAA
GTGCATATTGAGTTAAGATTGAAAGAAGATGAGTTTAAACATTTGATAGCTTCTCAAGAG
AACTTGGAGAAAGAAAAGAGTCATCTTCAATTGAGCAATGATGATTTTGCTAAACGATTA
GCCCTATCACTCCACGAGAGAAAAATAATTGAAGATTTGGTTCAAAAGTGGTCTGTAAAG
TTGATTGACTTGGATAAACAAAGTTTGAATTTTTCAGACAAGTTTGATCAGCTAAACCAC
ATGAACTGCTCTTATGTCAAGCTGGCTCAGCAGGAGAGAGACCTTGCTGCTAAGCATTCT
CAACAACAATACGCTCAACTCCATCGTACATTCTTGTGCATTGCATCTGAAAAAGATGCA
TTACAGCTGAAAAATCAGGTGTTAAACAATAAGGTTGTTGAACTTCAGGAAGCCCACAAT
TTTGTAACAGCACAGCTTGCAGAGGAATGCCGCTTAGCAGGGGAGAAAATTCAGACGTTG
GAGTCAGAAGTAGAAAATCTTGTCTCAAGGAAGATCGACAAGGAGATGTTAGTTACCAAG
TTAGAGGAGATTATTAACACTCAATCAGAAAGTTTGAAATCATCTGAGAATAAAATGAAA
GATTTATTACTGAAATTGTCAACACTAGAAACTGAGAACAAAGATAATACTGAGAAATTA
CAAGCAGAGATACTAAAAAGGGCAGATAAAATAGAAATTCTGCAAAAGGAGGGTGAGAAG
GATAAGCAACATGTAGATTCATTGGAGAATCAAGTCAGCCAGCTCCAAAACATCTTGCAG
GAGAAGGAACAGCTTATTCTGCAGTATAAGGACAGAGTGAAGCAGCTGGAAGTTCAAAAT
ATAGAGAATCAGGCATTGCTAGATGCTGCTGAGAGTAAAATTACAGAAACCAAGAAGCAA
TACGATCTGATGCTTGAAACTAAACAATTAGAGTTATCAAGGCATTTGAAGGAAATATCT
CAGAGGAATGATCAGGCAATTAATGACATCCGGAAGAAGTATGAGGTGGAGAAATTAGAG
ATTATCAATCTTGAGAAAGAAAAGATGGATGAAGTTGTCAGGGAAATGGAAAGAAAATGT
GACCAGAAACTTGCAGAATGCAAAGAAGAATCAAGGCTGTATTTGATGCACATTCAAGAG
GAACACACCAATTTGATCACTCGTATTCAGCAAGAGCATGATAGAAAGGAGCTGAGTCTT
AAAGCTGACCACAGTGAAGAGCTTAAACGTGTCCAGCTTCAAGCTGAAGATGACTTGAGA
GAGAAAACAATTTTACTCAGAAATGAGCATGAAGTTCAGATTAAAGTCTTGAGACACCAG
CATGAGGATGAGTGCAAGAAGCTCCAAGAGGAATTAGATCGTCAGAAGTCCAGAGAAGAC
AGACAGAGAGCTTTATTGCAATTGCAGTGGAAAGTAATGAGTGACAAAACACAAGAGGAT
CCAGAAGTGAATTCAAAAAAGGATTACTCCATTTCATCAATTAAGATGAGAGACTCTAGT
AACAGAAAAAGAAGTCAGTGTGCACTGGTAAGAGTGGAAAACAGAGAGAAGGATTCACCT
TTTCCGGGAGCAACACAAACACCAGTTTCAAACTTGTTGAAGAAAGTAGAGAACGTGAAT
CCAGGAAGTGCAATAAGTGTTCCCAAACATAGTAAGAAGGTAACTCACCATGAGTATGAA
GTTGAGACAACTAATGGAAGAACAATTACAAAACGAAGAAAAACAAAAAGTACAGTCATG
TTTGGGGATCCAAGAAAACATAAGAAGGCCAATACACCCAAAGCCCATACTCCCAGAACT
ATTGTCAAGGAAATTAAGGGAGATAGGCATCTACACCCTTCAAATATAGGCGAGTTATTT
TCAGAAGGCTCTCTTAATCCATATGCAGATGATCCTTATGCATTTGATTAG

Peptide Sequence

PEP ID

VIT_18s0001g05600.t01
PEP Infomation

pep chromosome:12X:18:4390485:4398813:-1 gene:VIT_18s0001g05600 transcript:VIT_18s0001g05600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHKLGFSGLKSLDQFKSLSGSIPGTAKTFSVPGRPSSDSITLGSFANLKLTAEKLVKEQA
SVKTDLEMANSKLKKSMEDIQILEEKLQYALNENAKLKVKQKEDEKLWTGLESKFFSTKT
LCEQLTETLQHLACQVQDAEKDKELFEDKLSASSVAFDGLNDQMNGLSLKLESAEESIKN
YEKELKELKIQQEEREQFHRDEQCKTANLLEEKDAMIKQFEATVAASRLATESLNSKLEE
VHIELRLKEDEFKHLIASQENLEKEKSHLQLSNDDFAKRLALSLHERKIIEDLVQKWSVK
LIDLDKQSLNFSDKFDQLNHMNCSYVKLAQQERDLAAKHSQQQYAQLHRTFLCIASEKDA
LQLKNQVLNNKVVELQEAHNFVTAQLAEECRLAGEKIQTLESEVENLVSRKIDKEMLVTK
LEEIINTQSESLKSSENKMKDLLLKLSTLETENKDNTEKLQAEILKRADKIEILQKEGEK
DKQHVDSLENQVSQLQNILQEKEQLILQYKDRVKQLEVQNIENQALLDAAESKITETKKQ
YDLMLETKQLELSRHLKEISQRNDQAINDIRKKYEVEKLEIINLEKEKMDEVVREMERKC
DQKLAECKEESRLYLMHIQEEHTNLITRIQQEHDRKELSLKADHSEELKRVQLQAEDDLR
EKTILLRNEHEVQIKVLRHQHEDECKKLQEELDRQKSREDRQRALLQLQWKVMSDKTQED
PEVNSKKDYSISSIKMRDSSNRKRSQCALVRVENREKDSPFPGATQTPVSNLLKKVENVN
PGSAISVPKHSKKVTHHEYEVETTNGRTITKRRKTKSTVMFGDPRKHKKANTPKAHTPRT
IVKEIKGDRHLHPSNIGELFSEGSLNPYADDPYAFD

Transcript Sequence

Transcript ID

VIT_18s0001g05600.t01
Transcript Infomation

cdna chromosome:12X:18:4390485:4398813:-1 gene:VIT_18s0001g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATAAGCTAGGGTTTTCGGGCCTCAAGAGCTTGGATCAATTCAAATCTTTATCAGGA
TCCATCCCTGGAACCGCAAAAACCTTTTCCGTTCCTGGTCGTCCATCTTCAGATTCGATC
ACATTAGGAAGTTTTGCGAATTTGAAGCTCACTGCAGAGAAATTGGTTAAAGAGCAAGCG
TCTGTGAAAACTGACCTTGAAATGGCGAATTCTAAGCTGAAGAAATCAATGGAGGATATC
CAGATATTGGAGGAAAAGTTGCAGTACGCTCTTAATGAGAATGCAAAGCTCAAAGTGAAG
CAGAAAGAGGATGAAAAGCTCTGGACAGGGTTGGAATCAAAATTCTTTTCAACAAAGACC
TTATGCGAGCAGCTCACTGAAACTTTGCAGCACTTGGCTTGCCAGGTTCAGGATGCTGAA
AAAGATAAGGAACTTTTCGAAGACAAACTATCTGCAAGTTCAGTGGCTTTTGATGGTTTA
AATGATCAGATGAATGGTCTGTCTTTGAAATTGGAGTCTGCGGAGGAAAGCATAAAAAAT
TATGAGAAAGAGCTGAAGGAACTTAAAATTCAGCAAGAGGAAAGGGAGCAGTTTCACAGA
GATGAGCAATGCAAAACTGCCAATCTCCTAGAGGAAAAAGATGCTATGATCAAGCAGTTT
GAAGCAACTGTAGCTGCTAGTAGGTTGGCCACAGAGAGCTTGAACTCTAAATTGGAAGAA
GTGCATATTGAGTTAAGATTGAAAGAAGATGAGTTTAAACATTTGATAGCTTCTCAAGAG
AACTTGGAGAAAGAAAAGAGTCATCTTCAATTGAGCAATGATGATTTTGCTAAACGATTA
GCCCTATCACTCCACGAGAGAAAAATAATTGAAGATTTGGTTCAAAAGTGGTCTGTAAAG
TTGATTGACTTGGATAAACAAAGTTTGAATTTTTCAGACAAGTTTGATCAGCTAAACCAC
ATGAACTGCTCTTATGTCAAGCTGGCTCAGCAGGAGAGAGACCTTGCTGCTAAGCATTCT
CAACAACAATACGCTCAACTCCATCGTACATTCTTGTGCATTGCATCTGAAAAAGATGCA
TTACAGCTGAAAAATCAGGTGTTAAACAATAAGGTTGTTGAACTTCAGGAAGCCCACAAT
TTTGTAACAGCACAGCTTGCAGAGGAATGCCGCTTAGCAGGGGAGAAAATTCAGACGTTG
GAGTCAGAAGTAGAAAATCTTGTCTCAAGGAAGATCGACAAGGAGATGTTAGTTACCAAG
TTAGAGGAGATTATTAACACTCAATCAGAAAGTTTGAAATCATCTGAGAATAAAATGAAA
GATTTATTACTGAAATTGTCAACACTAGAAACTGAGAACAAAGATAATACTGAGAAATTA
CAAGCAGAGATACTAAAAAGGGCAGATAAAATAGAAATTCTGCAAAAGGAGGGTGAGAAG
GATAAGCAACATGTAGATTCATTGGAGAATCAAGTCAGCCAGCTCCAAAACATCTTGCAG
GAGAAGGAACAGCTTATTCTGCAGTATAAGGACAGAGTGAAGCAGCTGGAAGTTCAAAAT
ATAGAGAATCAGGCATTGCTAGATGCTGCTGAGAGTAAAATTACAGAAACCAAGAAGCAA
TACGATCTGATGCTTGAAACTAAACAATTAGAGTTATCAAGGCATTTGAAGGAAATATCT
CAGAGGAATGATCAGGCAATTAATGACATCCGGAAGAAGTATGAGGTGGAGAAATTAGAG
ATTATCAATCTTGAGAAAGAAAAGATGGATGAAGTTGTCAGGGAAATGGAAAGAAAATGT
GACCAGAAACTTGCAGAATGCAAAGAAGAATCAAGGCTGTATTTGATGCACATTCAAGAG
GAACACACCAATTTGATCACTCGTATTCAGCAAGAGCATGATAGAAAGGAGCTGAGTCTT
AAAGCTGACCACAGTGAAGAGCTTAAACGTGTCCAGCTTCAAGCTGAAGATGACTTGAGA
GAGAAAACAATTTTACTCAGAAATGAGCATGAAGTTCAGATTAAAGTCTTGAGACACCAG
CATGAGGATGAGTGCAAGAAGCTCCAAGAGGAATTAGATCGTCAGAAGTCCAGAGAAGAC
AGACAGAGAGCTTTATTGCAATTGCAGTGGAAAGTAATGAGTGACAAAACACAAGAGGAT
CCAGAAGTGAATTCAAAAAAGGATTACTCCATTTCATCAATTAAGATGAGAGACTCTAGT
AACAGAAAAAGAAGTCAGTGTGCACTGGTAAGAGTGGAAAACAGAGAGAAGGATTCACCT
TTTCCGGGAGCAACACAAACACCAGTTTCAAACTTGTTGAAGAAAGTAGAGAACGTGAAT
CCAGGAAGTGCAATAAGTGTTCCCAAACATAGTAAGAAGGTAACTCACCATGAGTATGAA
GTTGAGACAACTAATGGAAGAACAATTACAAAACGAAGAAAAACAAAAAGTACAGTCATG
TTTGGGGATCCAAGAAAACATAAGAAGGCCAATACACCCAAAGCCCATACTCCCAGAACT
ATTGTCAAGGAAATTAAGGGAGATAGGCATCTACACCCTTCAAATATAGGCGAGTTATTT
TCAGAAGGCTCTCTTAATCCATATGCAGATGATCCTTATGCATTTGATTAGAGGGAGTTG
ATAATGCAATGACAAATATTGAAGCTTCAGAGCAGACAATTCGAATGTGATTCATCTGAC
TGCCTCACTATATCTGGAGTAAATGAACTTTGTCCTGCATAAAGGAATCGGAGTAGAAGA
GTCTTCTATTGCATTATTGTAAGACACGAGATGTACTTGTTTTGTCTGGATAACTGTCTT
ACTGCTGGTTTAGTTTGTTTAGACTAT