Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05520.t01
CDS Infomation

cds chromosome:12X:18_random:4336041:4344318:-1 gene:VIT_18s0001g05520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTCTCATCTCTCAGCAGAGGTAAAACGTCCAGTAGTAAGCTTTCGCTCCAGCATC
TGGGGAAATCGTTTCATCAACTACACTCCTGATGATGAGATAACTCGTGCCTATAACCAG
CAGCGGGTTGAGGATTTGAAGGAGGAAGTGAAAAGAGAGCTAATGGTAGCTGCGGGTAAG
CCTTCACAACATCTGAACTTCATTGATGCTGTTCAACGACTCGGTATGGCATACCACTTT
GAAGAAGAGATAGAAGAAGCAATAGGGCATATCTATGATAACTACCATCACAGTGATGAT
AAATATGATGATCTCTGTAATGTTTCTCTCCGATTTCGACTTCTAAGACAGCAAGGGTAC
AATATTTCATGTGACATATTCGAGAGGTTCAAAGATGAAAATGGCAGTTTCAAGGAATGT
CTGAACAATGATGTGGAAGGCATGCTTGGGTTATATGAGGCTGCACATCTCAGGGTGCAG
GAAGAAGATATACTAGATGAAGCACTTGCTTTCACCACCGCTCACCTTGAGTCTTTGGTT
GAAGATTTAGACTATCCTCTTGCAGCACAAGCAACCCAAGCCCTATACCGGCCCATTAGG
AAAGGTTTGGAGAGGCTGGAGGCAAGGCCTCACATATCTATCTACCAAGATGAAGCTTCA
CACAGTAAAGCTTTATTGGAGCTTGCCAAGTTAGATTTCAATCTGCTGCAGTCACTGTAC
AAGAAAGAGCTAAGCTACATCACTAGGTGGTGGAAAGATTTAGATTTCTCTTCGAAGTTG
CCTTTTGTCCGGGATAGAGTGGTGGAAACCTACCTTTGGATTGTCGCAGAATGTTTTGAG
CCCCAATACTCGTATGCTAGAAGAATACAGACCAAATTGCTTGTTCTAATAACAGTTATA
GATGATGTCTATGATGCATATGGCACTTTGGAAGAACTTGAACTCTTCACAGAAGCAATT
GAGAGGTGGGACAATAATAGCATAGATAGTCTTCCAGAATACATGAAGCCATGCTATCAG
GCAGTCTTGGATGTCTACAAAGAAATTGAGGAGAAGGAAAATGAAGAAAGACCTTACTGT
GTTCACTATGCAAAAAAGGCAGTAAGGTCTGTTCGAGCTTACTTCAATGAAGGCAAATGG
CTCCATGCAGAATATGTACCAACGATGGAAGAGTACATGGGTGTTGCCCTAGTAAGCTCT
GATGTCCCCATGTTCACAATCATCTCCTTTGTTGGCATGGGAATGATGGCAACAAAGGAG
GCCTTTGATTGGGTGTTAAATGGCCCTAAGATTGTCCGAGCTTGTTCCACAATTATAACC
CTTGCCTATAACCAGCAGCGGATAGAAGATTTGAAAGAGGAAGTGAGAAGAGAGCTGATG
GCAGCTGCTGGTAAGCCTTCACAGCAGCTGAACTTCATCGATGCAGTTCAAAGACTAGGG
GTGGCATACCACTTTGAAGAAGAGATAGAAGAAGCATTAGGACATACATTCAAAAGATTC
ACAGATGAAAATGGTAGTTTCAAGGAATGTCTGATAAAAGATGTGGAAGGCATGCTAGGG
TTGTATGAAGCTGCACATCTCAGGGTTCAGGAAGAGGATATACTAGATGAAGCAATTGCT
TTCACCACCACTCACCTAAGGTCTTTGGTTGAACATTTAGACTGTCCTCTTGCAGCACCA
GTAAATCGAGCCCTCTACCGCCCCATTAGGAAATGCTTGGAGAGGCTGGAGGCAAGGCCT
TATATTACTATGTACCAAGATGAAGCTTCACATAGTAAAGATTTATTGGAGCTTGCCAAG
TTAGATTTCAACCAACTGCAGTCACTGTATAAGAAAGAGTTAAGCCACATCACTAGGTGG
TGGAAAGATTTAGATTTCTCCTCGAAGCTGCCTTTTTTCAGAGATAGAGCGGTGGAAACC
TACCTGTGGATTGCTGTAGCATGTTTTGAGCCCCAATACTCGTATGCTAGAAGAATACAG
GCCAAATTACTTGCTATAGCAACAGTTATAGATGATATGTATGATGCATATGGCACTCCG
GAAGAACTGGAGCTCTTTACAGAAGCAATTGAGAGGTATGACATAAAAATTTTGCACCTT
AGAGGAGGATGA

Peptide Sequence

PEP ID

VIT_18s0001g05520.t01
PEP Infomation

pep chromosome:12X:18_random:4336041:4344318:-1 gene:VIT_18s0001g05520 transcript:VIT_18s0001g05520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSHLSAEVKRPVVSFRSSIWGNRFINYTPDDEITRAYNQQRVEDLKEEVKRELMVAAGK
PSQHLNFIDAVQRLGMAYHFEEEIEEAIGHIYDNYHHSDDKYDDLCNVSLRFRLLRQQGY
NISCDIFERFKDENGSFKECLNNDVEGMLGLYEAAHLRVQEEDILDEALAFTTAHLESLV
EDLDYPLAAQATQALYRPIRKGLERLEARPHISIYQDEASHSKALLELAKLDFNLLQSLY
KKELSYITRWWKDLDFSSKLPFVRDRVVETYLWIVAECFEPQYSYARRIQTKLLVLITVI
DDVYDAYGTLEELELFTEAIERWDNNSIDSLPEYMKPCYQAVLDVYKEIEEKENEERPYC
VHYAKKAVRSVRAYFNEGKWLHAEYVPTMEEYMGVALVSSDVPMFTIISFVGMGMMATKE
AFDWVLNGPKIVRACSTIITLAYNQQRIEDLKEEVRRELMAAAGKPSQQLNFIDAVQRLG
VAYHFEEEIEEALGHTFKRFTDENGSFKECLIKDVEGMLGLYEAAHLRVQEEDILDEAIA
FTTTHLRSLVEHLDCPLAAPVNRALYRPIRKCLERLEARPYITMYQDEASHSKDLLELAK
LDFNQLQSLYKKELSHITRWWKDLDFSSKLPFFRDRAVETYLWIAVACFEPQYSYARRIQ
AKLLAIATVIDDMYDAYGTPEELELFTEAIERYDIKILHLRGG

Transcript Sequence

Transcript ID

VIT_18s0001g05520.t01
Transcript Infomation

cdna chromosome:12X:18_random:4336041:4344318:-1 gene:VIT_18s0001g05520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTCTCATCTCTCAGCAGAGGTAAAACGTCCAGTAGTAAGCTTTCGCTCCAGCATC
TGGGGAAATCGTTTCATCAACTACACTCCTGATGATGAGATAACTCGTGCCTATAACCAG
CAGCGGGTTGAGGATTTGAAGGAGGAAGTGAAAAGAGAGCTAATGGTAGCTGCGGGTAAG
CCTTCACAACATCTGAACTTCATTGATGCTGTTCAACGACTCGGTATGGCATACCACTTT
GAAGAAGAGATAGAAGAAGCAATAGGGCATATCTATGATAACTACCATCACAGTGATGAT
AAATATGATGATCTCTGTAATGTTTCTCTCCGATTTCGACTTCTAAGACAGCAAGGGTAC
AATATTTCATGTGACATATTCGAGAGGTTCAAAGATGAAAATGGCAGTTTCAAGGAATGT
CTGAACAATGATGTGGAAGGCATGCTTGGGTTATATGAGGCTGCACATCTCAGGGTGCAG
GAAGAAGATATACTAGATGAAGCACTTGCTTTCACCACCGCTCACCTTGAGTCTTTGGTT
GAAGATTTAGACTATCCTCTTGCAGCACAAGCAACCCAAGCCCTATACCGGCCCATTAGG
AAAGGTTTGGAGAGGCTGGAGGCAAGGCCTCACATATCTATCTACCAAGATGAAGCTTCA
CACAGTAAAGCTTTATTGGAGCTTGCCAAGTTAGATTTCAATCTGCTGCAGTCACTGTAC
AAGAAAGAGCTAAGCTACATCACTAGGTGGTGGAAAGATTTAGATTTCTCTTCGAAGTTG
CCTTTTGTCCGGGATAGAGTGGTGGAAACCTACCTTTGGATTGTCGCAGAATGTTTTGAG
CCCCAATACTCGTATGCTAGAAGAATACAGACCAAATTGCTTGTTCTAATAACAGTTATA
GATGATGTCTATGATGCATATGGCACTTTGGAAGAACTTGAACTCTTCACAGAAGCAATT
GAGAGGTGGGACAATAATAGCATAGATAGTCTTCCAGAATACATGAAGCCATGCTATCAG
GCAGTCTTGGATGTCTACAAAGAAATTGAGGAGAAGGAAAATGAAGAAAGACCTTACTGT
GTTCACTATGCAAAAAAGGCAGTAAGGTCTGTTCGAGCTTACTTCAATGAAGGCAAATGG
CTCCATGCAGAATATGTACCAACGATGGAAGAGTACATGGGTGTTGCCCTAGTAAGCTCT
GATGTCCCCATGTTCACAATCATCTCCTTTGTTGGCATGGGAATGATGGCAACAAAGGAG
GCCTTTGATTGGGTGTTAAATGGCCCTAAGATTGTCCGAGCTTGTTCCACAATTATAACC
CTTGCCTATAACCAGCAGCGGATAGAAGATTTGAAAGAGGAAGTGAGAAGAGAGCTGATG
GCAGCTGCTGGTAAGCCTTCACAGCAGCTGAACTTCATCGATGCAGTTCAAAGACTAGGG
GTGGCATACCACTTTGAAGAAGAGATAGAAGAAGCATTAGGACATACATTCAAAAGATTC
ACAGATGAAAATGGTAGTTTCAAGGAATGTCTGATAAAAGATGTGGAAGGCATGCTAGGG
TTGTATGAAGCTGCACATCTCAGGGTTCAGGAAGAGGATATACTAGATGAAGCAATTGCT
TTCACCACCACTCACCTAAGGTCTTTGGTTGAACATTTAGACTGTCCTCTTGCAGCACCA
GTAAATCGAGCCCTCTACCGCCCCATTAGGAAATGCTTGGAGAGGCTGGAGGCAAGGCCT
TATATTACTATGTACCAAGATGAAGCTTCACATAGTAAAGATTTATTGGAGCTTGCCAAG
TTAGATTTCAACCAACTGCAGTCACTGTATAAGAAAGAGTTAAGCCACATCACTAGGTGG
TGGAAAGATTTAGATTTCTCCTCGAAGCTGCCTTTTTTCAGAGATAGAGCGGTGGAAACC
TACCTGTGGATTGCTGTAGCATGTTTTGAGCCCCAATACTCGTATGCTAGAAGAATACAG
GCCAAATTACTTGCTATAGCAACAGTTATAGATGATATGTATGATGCATATGGCACTCCG
GAAGAACTGGAGCTCTTTACAGAAGCAATTGAGAGGTATGACATAAAAATTTTGCACCTT
AGAGGAGGATGA