Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05440.t01
CDS Infomation

cds chromosome:12X:18:4310333:4319306:-1 gene:VIT_18s0001g05440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAGAGTAATTGCTAAGTTCCCAACTGTGTTTGTCCCGGGTCAACTCGGTCAGCCC
AGAGATCCTTTTTTCAAACCCTTGTTCTCACCGCCAACGGTCAACTTCGTTTTCGCGGCA
AAACTTCGAGCATCTTCAACTCCTGCTGCCGTCGTCGTTGAAACCAAGCCGGATCCTATT
TCAGTTGAAAAGGAGATTAGCATTGGCAAGAGCATTTTAGCTTGTCCCATTTGTTATCAA
CCATTCACATGGAATGGTGATCTAGGTTTATCAGTAGAATCTATGCCAGGGTCTAGTTTC
CACTGTAGTTCTTGTAAGAAGGCATGCTTCGGTAATGAAACACATCTTGACCTGACAGTA
GCCACTGGGGCCAAGGAGTATGATGAATCCATGCCAGCTGCAACAGAGATATTCAGGACT
CCACTGATATCATTTCTCTATGAGAGGGGCTGGCGTCAAAATTTTATATGGGGTGGTTTT
CCAGGTCTAGAGAAAGAGTTTGAATTGGCTAAAGGTTACCTTAAGCCAGTTCTAGGTGGA
ACTATTGTTGATGCTAGTTGTGGGAGTGGATTATTTTCAAGAACTTTTGCCAAGAGTGGA
TTATTTTCTCTTGTTGTTGCTCTGGACTTCTCAGAGAACATGCTACGACAATGTTATGAA
TTCATTAAGCAGGAGGAAGGCTTTCCCAAAGAGAATATACTCTTGGTCAGAGCTGATATC
TCCAGACTTCCTTTTGCTTCAAGTTCAGTTGATGCTGTGCATGCTGGTGCGGCATTGCAC
TGTTGGCCCTCGCCCTCTATTGCTGTAGCTGAAATAAGCCGGGTTCTTCGCCCAGGAGGA
GTTTTTGTTGCTACCACCTACTTGCTTGATGGCCCTTTTTCTGTGCTTCCTTTTCTTAAG
ACTCTGCGCCAGAATATGGTGCGAGTTGCAGGCAGCCATGCGTTCTTATCTGAACGTGAA
CTAGAAGATCTCTGCACAGCCTGTGGGTTAGGGGGTTTTACATGTGTGAGAAATGGGCGC
TTTGTGATGATCTCAGCTACAAAACCTAGCTAA

Peptide Sequence

PEP ID

VIT_18s0001g05440.t01
PEP Infomation

pep chromosome:12X:18:4310333:4319306:-1 gene:VIT_18s0001g05440 transcript:VIT_18s0001g05440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARVIAKFPTVFVPGQLGQPRDPFFKPLFSPPTVNFVFAAKLRASSTPAAVVVETKPDPI
SVEKEISIGKSILACPICYQPFTWNGDLGLSVESMPGSSFHCSSCKKACFGNETHLDLTV
ATGAKEYDESMPAATEIFRTPLISFLYERGWRQNFIWGGFPGLEKEFELAKGYLKPVLGG
TIVDASCGSGLFSRTFAKSGLFSLVVALDFSENMLRQCYEFIKQEEGFPKENILLVRADI
SRLPFASSSVDAVHAGAALHCWPSPSIAVAEISRVLRPGGVFVATTYLLDGPFSVLPFLK
TLRQNMVRVAGSHAFLSERELEDLCTACGLGGFTCVRNGRFVMISATKPS

Transcript Sequence

Transcript ID

VIT_18s0001g05440.t01
Transcript Infomation

cdna chromosome:12X:18:4310333:4319306:-1 gene:VIT_18s0001g05440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGGGAGTGGAGAGAGTTAGGATTCAGAGAGACAAGAGTTAATGGCGAGAGTAATTGCTAA
GTTCCCAACTGTGTTTGTCCCGGGTCAACTCGGTCAGCCCAGAGATCCTTTTTTCAAACC
CTTGTTCTCACCGCCAACGGTCAACTTCGTTTTCGCGGCAAAACTTCGAGCATCTTCAAC
TCCTGCTGCCGTCGTCGTTGAAACCAAGCCGGATCCTATTTCAGTTGAAAAGGAGATTAG
CATTGGCAAGAGCATTTTAGCTTGTCCCATTTGTTATCAACCATTCACATGGAATGGTGA
TCTAGGTTTATCAGTAGAATCTATGCCAGGGTCTAGTTTCCACTGTAGTTCTTGTAAGAA
GGCATGCTTCGGTAATGAAACACATCTTGACCTGACAGTAGCCACTGGGGCCAAGGAGTA
TGATGAATCCATGCCAGCTGCAACAGAGATATTCAGGACTCCACTGATATCATTTCTCTA
TGAGAGGGGCTGGCGTCAAAATTTTATATGGGGTGGTTTTCCAGGTCTAGAGAAAGAGTT
TGAATTGGCTAAAGGTTACCTTAAGCCAGTTCTAGGTGGAACTATTGTTGATGCTAGTTG
TGGGAGTGGATTATTTTCAAGAACTTTTGCCAAGAGTGGATTATTTTCTCTTGTTGTTGC
TCTGGACTTCTCAGAGAACATGCTACGACAATGTTATGAATTCATTAAGCAGGAGGAAGG
CTTTCCCAAAGAGAATATACTCTTGGTCAGAGCTGATATCTCCAGACTTCCTTTTGCTTC
AAGTTCAGTTGATGCTGTGCATGCTGGTGCGGCATTGCACTGTTGGCCCTCGCCCTCTAT
TGCTGTAGCTGAAATAAGCCGGGTTCTTCGCCCAGGAGGAGTTTTTGTTGCTACCACCTA
CTTGCTTGATGGCCCTTTTTCTGTGCTTCCTTTTCTTAAGACTCTGCGCCAGAATATGGT
GCGAGTTGCAGGCAGCCATGCGTTCTTATCTGAACGTGAACTAGAAGATCTCTGCACAGC
CTGTGGGTTAGGGGGTTTTACATGTGTGAGAAATGGGCGCTTTGTGATGATCTCAGCTAC
AAAACCTAGCTAAGAATTTGGTTTACACCATTCTCCATCGCCTCATTTATATTGGATGTC
TGTCAAAGAACTTGGAAATTCTGTAATATTCTTGTACATGGGTGCTGCTGAAATTGCATA
TGGGTAAATTGTATGAGAATCTAAAGAATCTACAGGGTGAAATAAAGTTGAGGGCCTTTG
ATATTTC