Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05420.t01
CDS Infomation

cds chromosome:12X:18:4306846:4309947:1 gene:VIT_18s0001g05420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGCAGAGACGCTGACGTTGGTGTTGGTGAACCTAGCAGGCATAATGGAGAGAGCA
GACGAGTCTCTGCTTTCAGGGGTGTACAAGGAAGTGGGTGCAGCCCTCCATACGGACCCA
ACTGGCCTGGGCTCCCTCACCCTTTTCAGGTCCATGGTGCAGGCCTCTTCCTATCCACTC
GCCGTTTACCTGGCCGCCCGTCACAACCGCACCCACGTCATTGCTCTCGGCGCCTTCCTT
TGGGCTGCCGCCACCTTCCTCGTCGCCTTCTCCTCCACCTTCTTCCAGGTGGCAGTATCA
AGAGCTTTGAATGGGATTGGCCTTGCAATAGTTGGACCTGCAATTCAGTCCCTTATAGCT
GACTCCACTGATGATCACAACCGTGGTATGGCTTTTGGATGGCTACAGCTGACAGGGAAC
CTTGGCTCAATTCTTGGTGGACTCTGTGCATTGTTGCTGGCCCAGACAACATTCATGGGA
ATCGCGGGTTGGAGAATTTCCTTCCATCTTGTTGGACTGGTCAGTGTTATTGTAGGTATT
TTAGTCCGCCTCTTTGCCAATGACCCACACTTCCCAGATGGTGCTGCTAAAGCCAGTAAC
CAAGTTCCAAGTAAATCCATATGGTCTGAAGTGAAGGACCTGGTTCAGGAAGCCAAATCT
GTCATCAAGATTACATCCTTCCAGATCATTGTGGCTCAGGGTGTCACCGGTTCATTCCCC
TGGTCAGCTTTGTCATTTGCACCCATGTGGTTAGAGCTTATAGGCTTCTCTCATAAGAAA
ACCGCATTCCTCATAAGCTTATTTGTTATTGCTGCTTCCCTTGGGGGACTGTTTGGGGGT
AGGATGGGGGATATTCTTTCCAGGATCCGCCCAGATTCTGGGAGGATAATTTTGGCACAG
ATAAGCTCACTGTCAGCCATCCCACTAGCAGCACTACTTCTGCTGGTTTTACCTGACAAT
CCATCCACTGCAGCCATGCATGGTTTGGTCTTGTTCATCATGGGGTTGTGCATATCCTGG
AATGCTCCAGCTACAAACAATCCAATTTTTGCAGAGATAGTCCCTGAAAAATCTCGAACA
AGTATCTATGCTTTGGATCGATCTTTCGAGTCCATATTGTCATCTTTTGCTCCACCTGTT
GTTGGGATATTGGCTCAGCATGTTTATGGTTACAAACCGGTTCCCGAGGGATCCAGTGAA
TCGGAAGAGATAGCAACAGATAGAGGGAATGCTGCATCATTGGCCAAGGCACTGTACACA
GCTATAGGAATTCCAATGGCTCTCTGTTGCCTCATCTATTCATTCCTATATTCCACTTAT
CCCAGAGACAAGGAACGGGCTCAGATGGAGGCTTTAATAGAATCAGAGATGCAACAGATG
GAGTCGGACAATATATGTGCAGGAACAGAATATCCTCGAGCTCAGCTACTAGAATCAGAA
GATGCCTATGTCAATGATAGGGGCGTCACTGAAATAGATTATGAAGGGAGGAGCAGTCCA
GATTTTGAAGAAAATGATGACAAGATGTTACTTCACCACCAATTGACATTCTCCAACTTA
GGGGAATAG

Peptide Sequence

PEP ID

VIT_18s0001g05420.t01
PEP Infomation

pep chromosome:12X:18:4306846:4309947:1 gene:VIT_18s0001g05420 transcript:VIT_18s0001g05420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKAETLTLVLVNLAGIMERADESLLSGVYKEVGAALHTDPTGLGSLTLFRSMVQASSYPL
AVYLAARHNRTHVIALGAFLWAAATFLVAFSSTFFQVAVSRALNGIGLAIVGPAIQSLIA
DSTDDHNRGMAFGWLQLTGNLGSILGGLCALLLAQTTFMGIAGWRISFHLVGLVSVIVGI
LVRLFANDPHFPDGAAKASNQVPSKSIWSEVKDLVQEAKSVIKITSFQIIVAQGVTGSFP
WSALSFAPMWLELIGFSHKKTAFLISLFVIAASLGGLFGGRMGDILSRIRPDSGRIILAQ
ISSLSAIPLAALLLLVLPDNPSTAAMHGLVLFIMGLCISWNAPATNNPIFAEIVPEKSRT
SIYALDRSFESILSSFAPPVVGILAQHVYGYKPVPEGSSESEEIATDRGNAASLAKALYT
AIGIPMALCCLIYSFLYSTYPRDKERAQMEALIESEMQQMESDNICAGTEYPRAQLLESE
DAYVNDRGVTEIDYEGRSSPDFEENDDKMLLHHQLTFSNLGE

Transcript Sequence

Transcript ID

VIT_18s0001g05420.t01
Transcript Infomation

cdna chromosome:12X:18:4306846:4309947:1 gene:VIT_18s0001g05420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGAACAAGAAAGCAGGGAAGAGGGAGATAGAGAAAGGCAGAGACAGAGATGAAGGCA
GAGACGCTGACGTTGGTGTTGGTGAACCTAGCAGGCATAATGGAGAGAGCAGACGAGTCT
CTGCTTTCAGGGGTGTACAAGGAAGTGGGTGCAGCCCTCCATACGGACCCAACTGGCCTG
GGCTCCCTCACCCTTTTCAGGTCCATGGTGCAGGCCTCTTCCTATCCACTCGCCGTTTAC
CTGGCCGCCCGTCACAACCGCACCCACGTCATTGCTCTCGGCGCCTTCCTTTGGGCTGCC
GCCACCTTCCTCGTCGCCTTCTCCTCCACCTTCTTCCAGGTGGCAGTATCAAGAGCTTTG
AATGGGATTGGCCTTGCAATAGTTGGACCTGCAATTCAGTCCCTTATAGCTGACTCCACT
GATGATCACAACCGTGGTATGGCTTTTGGATGGCTACAGCTGACAGGGAACCTTGGCTCA
ATTCTTGGTGGACTCTGTGCATTGTTGCTGGCCCAGACAACATTCATGGGAATCGCGGGT
TGGAGAATTTCCTTCCATCTTGTTGGACTGGTCAGTGTTATTGTAGGTATTTTAGTCCGC
CTCTTTGCCAATGACCCACACTTCCCAGATGGTGCTGCTAAAGCCAGTAACCAAGTTCCA
AGTAAATCCATATGGTCTGAAGTGAAGGACCTGGTTCAGGAAGCCAAATCTGTCATCAAG
ATTACATCCTTCCAGATCATTGTGGCTCAGGGTGTCACCGGTTCATTCCCCTGGTCAGCT
TTGTCATTTGCACCCATGTGGTTAGAGCTTATAGGCTTCTCTCATAAGAAAACCGCATTC
CTCATAAGCTTATTTGTTATTGCTGCTTCCCTTGGGGGACTGTTTGGGGGTAGGATGGGG
GATATTCTTTCCAGGATCCGCCCAGATTCTGGGAGGATAATTTTGGCACAGATAAGCTCA
CTGTCAGCCATCCCACTAGCAGCACTACTTCTGCTGGTTTTACCTGACAATCCATCCACT
GCAGCCATGCATGGTTTGGTCTTGTTCATCATGGGGTTGTGCATATCCTGGAATGCTCCA
GCTACAAACAATCCAATTTTTGCAGAGATAGTCCCTGAAAAATCTCGAACAAGTATCTAT
GCTTTGGATCGATCTTTCGAGTCCATATTGTCATCTTTTGCTCCACCTGTTGTTGGGATA
TTGGCTCAGCATGTTTATGGTTACAAACCGGTTCCCGAGGGATCCAGTGAATCGGAAGAG
ATAGCAACAGATAGAGGGAATGCTGCATCATTGGCCAAGGCACTGTACACAGCTATAGGA
ATTCCAATGGCTCTCTGTTGCCTCATCTATTCATTCCTATATTCCACTTATCCCAGAGAC
AAGGAACGGGCTCAGATGGAGGCTTTAATAGAATCAGAGATGCAACAGATGGAGTCGGAC
AATATATGTGCAGGAACAGAATATCCTCGAGCTCAGCTACTAGAATCAGAAGATGCCTAT
GTCAATGATAGGGGCGTCACTGAAATAGATTATGAAGGGAGGAGCAGTCCAGATTTTGAA
GAAAATGATGACAAGATGTTACTTCACCACCAATTGACATTCTCCAACTTAGGGGAATAG
ATGTTCGGACAAGCATAAGAAGCTGGCCTTTCCTTATTAGTTATTTCCATGAGGCTACAT
TTGCAGCTCAAATGGTGAGGAAGATTCAAAACCTTAGCGTGGCATTAATCATACAAAATT
CCCAGTTTTGTGATGAAGAATTCAGACTCAGAAAATCATGGCATTGCGTATATACACATA
AGATGCATACAAAACACACACCAATCTTGTTCTAGTCTTCCTTGACTGTTATCCACGAAT
GTGACGTGTACATGTAATCAACAAGGCCCCAGTCGAAGGGGGTTAAGACTAATGAACGCT
CCTG