Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05400.t01
CDS Infomation

cds chromosome:12X:18:4299165:4300807:1 gene:VIT_18s0001g05400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCTGGCAACAGTAGTAGTATGCAATCTTCGAGTGGGGGGGATGAAGAGTATGAG
TCAAGGCCCGAGTCGATCCCGGCTTTCTTGAATCCTTCTGGCCACTTTGGTTCAGTCTCA
TCAAACCCACAGCCACCACCTTTTCCTCACCACCAAAACCACCCACCTACTTTGTTTGAT
CCTCGATCAAATTATGTGGATGCTTTCTCTCAATCATCAGCAAACCCAAATGCAAATTCC
TTGTTAAATCTCGACACGGTTTGGTCCAGAGGCCTAAGATCTGAGCCGAATTGCACTGAC
TTTGGGAACCTCACAGGCTTGTCTTCTTCCTCAACATCATCATCAGGCCAATCTATGTTA
GGGGTTCAAGGACCCGGTCAGGGCCAATTCCCAAGTTCATCTTCCACGAGGATGATGTCA
GTCCATGAAAATGGTGGACGTGCTTCGTCTGCTTCACTGCCCTCTGATCAAACCAACGTG
GTCCGAAGCTCCAAGAAGCGAACCAGGGCTTCAAGACGGGCACCCACAACTGTACTCACC
ACCGACACGTCCAATTTCCGAGCAATGGTGCAAGAATTCACTGGGATCCCCGCTCCTCCA
TTCTCCGCCTCACCCTACTCTCGCAGGCTCGATCTCTTTGGCGCTGGCTCATCCATCAAG
CCGGGACATCTGGAACCACTGGGGCCTCTCTATCCTTTACGCCCTTCCCCCCACAAGGTT
CAGCCAAACCTATTTGTATCTTCATCTTCCTCCCCATCTCCTTCTTTCTTCAACTCTACT
ATCGGTGACTCTATTGTTTCTACTACTAATATTGCCACTACCTCTACTAACAACATCATT
ACCACTTCCATGGCTGCTGCCACCAACGCTATCAATTCAGGTTCTAATACCTACCAACTA
CCTTCTGATCCTGGGTTTCCCAAACAACCTCAAAATGTACTAGGCATGCAAAACCCAATC
CTCTCTTTCCAGTCTCTCCTGCAGTCTCCACCTTCCCATCCGCTCAAGTACCCTTTAGCC
GATGTACCGGTTTTTGGCACCAAGTCTCCGGCAAGTTTAACCTTACCCTTACCTTCCTTT
GAGGAATTGGGCGTGCCCCATGGACACGTTAATGCAAACATTAGCGGGCTCCCAAGTCAT
GCAACTTCTGGTGGGTCGAGGCGGCTCAGGACAGACGATAATGGAACATGCTGGAGGGAT
GGAGCGGGATCCAACGAGGGGAGTCGAGAACAGTTGAGGCCGTTCAATGGAAATTATGGT
GATTCACCCCAGGTTAGTAGCTTTAAGTTGAACTGCTCAGCTTCTTCATCAGCTTTCCAC
CCTGAGAAGGGATCAGATAACGTTTCCTCTAGGGGTGAAGGTACAGTGGATTCATGGATT
TGTCCTTCGGATTAG

Peptide Sequence

PEP ID

VIT_18s0001g05400.t01
PEP Infomation

pep chromosome:12X:18:4299165:4300807:1 gene:VIT_18s0001g05400 transcript:VIT_18s0001g05400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSGNSSSMQSSSGGDEEYESRPESIPAFLNPSGHFGSVSSNPQPPPFPHHQNHPPTLFD
PRSNYVDAFSQSSANPNANSLLNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSSSGQSML
GVQGPGQGQFPSSSSTRMMSVHENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTVLT
TDTSNFRAMVQEFTGIPAPPFSASPYSRRLDLFGAGSSIKPGHLEPLGPLYPLRPSPHKV
QPNLFVSSSSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSNTYQL
PSDPGFPKQPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLTLPLPSF
EELGVPHGHVNANISGLPSHATSGGSRRLRTDDNGTCWRDGAGSNEGSREQLRPFNGNYG
DSPQVSSFKLNCSASSSAFHPEKGSDNVSSRGEGTVDSWICPSD

Transcript Sequence

Transcript ID

VIT_18s0001g05400.t01
Transcript Infomation

cdna chromosome:12X:18:4299165:4300807:1 gene:VIT_18s0001g05400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTGTTTATTATTATCGCCGTCCTCCTTTCCAAGTTAAAGCTATGGATTCTGGCAACAG
TAGTAGTATGCAATCTTCGAGTGGGGGGGATGAAGAGTATGAGTCAAGGCCCGAGTCGAT
CCCGGCTTTCTTGAATCCTTCTGGCCACTTTGGTTCAGTCTCATCAAACCCACAGCCACC
ACCTTTTCCTCACCACCAAAACCACCCACCTACTTTGTTTGATCCTCGATCAAATTATGT
GGATGCTTTCTCTCAATCATCAGCAAACCCAAATGCAAATTCCTTGTTAAATCTCGACAC
GGTTTGGTCCAGAGGCCTAAGATCTGAGCCGAATTGCACTGACTTTGGGAACCTCACAGG
CTTGTCTTCTTCCTCAACATCATCATCAGGCCAATCTATGTTAGGGGTTCAAGGACCCGG
TCAGGGCCAATTCCCAAGTTCATCTTCCACGAGGATGATGTCAGTCCATGAAAATGGTGG
ACGTGCTTCGTCTGCTTCACTGCCCTCTGATCAAACCAACGTGGTCCGAAGCTCCAAGAA
GCGAACCAGGGCTTCAAGACGGGCACCCACAACTGTACTCACCACCGACACGTCCAATTT
CCGAGCAATGGTGCAAGAATTCACTGGGATCCCCGCTCCTCCATTCTCCGCCTCACCCTA
CTCTCGCAGGCTCGATCTCTTTGGCGCTGGCTCATCCATCAAGCCGGGACATCTGGAACC
ACTGGGGCCTCTCTATCCTTTACGCCCTTCCCCCCACAAGGTTCAGCCAAACCTATTTGT
ATCTTCATCTTCCTCCCCATCTCCTTCTTTCTTCAACTCTACTATCGGTGACTCTATTGT
TTCTACTACTAATATTGCCACTACCTCTACTAACAACATCATTACCACTTCCATGGCTGC
TGCCACCAACGCTATCAATTCAGGTTCTAATACCTACCAACTACCTTCTGATCCTGGGTT
TCCCAAACAACCTCAAAATGTACTAGGCATGCAAAACCCAATCCTCTCTTTCCAGTCTCT
CCTGCAGTCTCCACCTTCCCATCCGCTCAAGTACCCTTTAGCCGATGTACCGGTTTTTGG
CACCAAGTCTCCGGCAAGTTTAACCTTACCCTTACCTTCCTTTGAGGAATTGGGCGTGCC
CCATGGACACGTTAATGCAAACATTAGCGGGCTCCCAAGTCATGCAACTTCTGGTGGGTC
GAGGCGGCTCAGGACAGACGATAATGGAACATGCTGGAGGGATGGAGCGGGATCCAACGA
GGGGAGTCGAGAACAGTTGAGGCCGTTCAATGGAAATTATGGTGATTCACCCCAGGTTAG
TAGCTTTAAGTTGAACTGCTCAGCTTCTTCATCAGCTTTCCACCCTGAGAAGGGATCAGA
TAACGTTTCCTCTAGGGGTGAAGGTACAGTGGATTCATGGATTTGTCCTTCGGATTAGGA
TTTGTGCAGCAATAAACAGTACAGAGAAACTACAATGAGGAAGAACTGTTTTACAGCAGA
GAGGATGATGATGTTGGGTCTGTCCTTCAACATTCATCATCCCTCGTCTTTAGCTAAGTT
ATGGCATCATATATTATCTTAATTATATGTAAATATGGTGTCTTCTCTCTGATTAAATAT
CCATAGAATGATTACAGAAATTA