Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05370.t01
CDS Infomation

cds chromosome:12X:18:4279252:4280705:1 gene:VIT_18s0001g05370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGGAAGAGAAGGGAAAGCAGCTCCTTCAGCTGATCTATTGGTATGTTTTCCATCT
AGAGCCCATCTAACGCTAATGCCCAAGCCCATATGCAGTCCAGCTAGGCCTTCGGAACCA
AGCAAGCGCCACCAGCACCAGCACCACCAGCACCACCATAACCACCCCCACCACCTCAAG
AAATCTAGCACCAGAAATGGTGGCCAAGCCAGCCCACTCTTATGGGCCAAAACCAAGCCA
ATGGGCACGGAAATCTCCGAACCAACGTCTCCCAAAGTCACCTGCGCTGGCCAGATCAAG
GTCAGGCACAAAACCAGTTCCTGCAAGAATTGGCAATCAGTCATGGAGGAGATTGAGAGG
ATTCACAACAACAAAAAGCACAAGAAGAGGCCCACTTGGGTTGAAGCGCTAGGGTTTAAG
AAAGAAATCATGCAGTTCTTGACATGCTTGCGAAGCATAAGATTCGATTTTCGGTGCTTC
GGGTCTTTTCCTGAATCGGGAAACACTTCTGATGATGAAGAAGAAGATGGAGATCAATAT
CAACATAACCAAGTAGGTGTAGAGGAGAGTGATGATAATGAAACTTCAAGAACTATCTTT
TCCAAATGGTTTATGGTGTTGCAAGAAAATCAGAGCTGTGGCTCCAATAAAGAAGAAATA
AAAGAGAAAAGCAAGTCATACGGTGAAGAATCTGCGGTCGCACCTTCAGTTCCTCCTCCA
AATGCTCTCTTACTAATGCGTTGTAGGTCCGCCCCCTCAAAAAGCTGGTTAGAAGAGAAA
GACAAAGAAAAGGAAAAAGAAGAAGAGGAAGAAGAAGATCAAGAAGCAAAGAAAGCAATG
TTAATTATGGAGGAAGAGAATAAAAAGAAGAAAGAAAATCTGGTGGTGATGAAATACAAC
AATGATTTCTACAAATTTTCTTCCGACATTGCAAAGGAGACTTGGGTCGTTGGTGGAGCC
AGAGACCCATTATCAAGAAGTCGAAGTTGGAAAAGATGA

Peptide Sequence

PEP ID

VIT_18s0001g05370.t01
PEP Infomation

pep chromosome:12X:18:4279252:4280705:1 gene:VIT_18s0001g05370 transcript:VIT_18s0001g05370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGREGKAAPSADLLVCFPSRAHLTLMPKPICSPARPSEPSKRHQHQHHQHHHNHPHHLK
KSSTRNGGQASPLLWAKTKPMGTEISEPTSPKVTCAGQIKVRHKTSSCKNWQSVMEEIER
IHNNKKHKKRPTWVEALGFKKEIMQFLTCLRSIRFDFRCFGSFPESGNTSDDEEEDGDQY
QHNQVGVEESDDNETSRTIFSKWFMVLQENQSCGSNKEEIKEKSKSYGEESAVAPSVPPP
NALLLMRCRSAPSKSWLEEKDKEKEKEEEEEEDQEAKKAMLIMEEENKKKKENLVVMKYN
NDFYKFSSDIAKETWVVGGARDPLSRSRSWKR

Transcript Sequence

Transcript ID

VIT_18s0001g05370.t01
Transcript Infomation

cdna chromosome:12X:18:4279252:4280705:1 gene:VIT_18s0001g05370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTAAAGAGAAAACGCATAAAAAAAGGGGGCAAAAGGAAAGGAAAGCTGTCAAGGCCTCCC
TCTTCCTTTCTTTTAAAAAACCATTCAATACACTACTCCTAACACCCAAAACCATACAAG
CAAGTGCAAGATCTGAAGGGCAAGAAATAAAGCACAGAATAGAAGAAGTTAGGAGAAGAA
GAGAAAAGATGAAGGGAAGAGAAGGGAAAGCAGCTCCTTCAGCTGATCTATTGGTATGTT
TTCCATCTAGAGCCCATCTAACGCTAATGCCCAAGCCCATATGCAGTCCAGCTAGGCCTT
CGGAACCAAGCAAGCGCCACCAGCACCAGCACCACCAGCACCACCATAACCACCCCCACC
ACCTCAAGAAATCTAGCACCAGAAATGGTGGCCAAGCCAGCCCACTCTTATGGGCCAAAA
CCAAGCCAATGGGCACGGAAATCTCCGAACCAACGTCTCCCAAAGTCACCTGCGCTGGCC
AGATCAAGGTCAGGCACAAAACCAGTTCCTGCAAGAATTGGCAATCAGTCATGGAGGAGA
TTGAGAGGATTCACAACAACAAAAAGCACAAGAAGAGGCCCACTTGGGTTGAAGCGCTAG
GGTTTAAGAAAGAAATCATGCAGTTCTTGACATGCTTGCGAAGCATAAGATTCGATTTTC
GGTGCTTCGGGTCTTTTCCTGAATCGGGAAACACTTCTGATGATGAAGAAGAAGATGGAG
ATCAATATCAACATAACCAAGTAGGTGTAGAGGAGAGTGATGATAATGAAACTTCAAGAA
CTATCTTTTCCAAATGGTTTATGGTGTTGCAAGAAAATCAGAGCTGTGGCTCCAATAAAG
AAGAAATAAAAGAGAAAAGCAAGTCATACGGTGAAGAATCTGCGGTCGCACCTTCAGTTC
CTCCTCCAAATGCTCTCTTACTAATGCGTTGTAGGTCCGCCCCCTCAAAAAGCTGGTTAG
AAGAGAAAGACAAAGAAAAGGAAAAAGAAGAAGAGGAAGAAGAAGATCAAGAAGCAAAGA
AAGCAATGTTAATTATGGAGGAAGAGAATAAAAAGAAGAAAGAAAATCTGGTGGTGATGA
AATACAACAATGATTTCTACAAATTTTCTTCCGACATTGCAAAGGAGACTTGGGTCGTTG
GTGGAGCCAGAGACCCATTATCAAGAAGTCGAAGTTGGAAAAGATGACGATCACGGTGAC
TACTGTTTTTCCCTTCCTCCCCATTTTCTTCTTCTAAATTTCCTTCAAACATTTATTTTC
TGTAATTTGATTTTTAATTTTCCTCCACTCGTCGTTTCTTGTGTGGCAAATCCAAATGAG
ATGGCCATCTTTAGTTTACTTATTTTATCTGTTCCAAGATTTGTATTATGTATTAAATAT
GTACAGCTTTTTTTCCCTTCGATTGGGAAAAAAAGATTTTGCTGCCATGTACATTTTGTG
ATGTAGTTTT