Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05290.t01
CDS Infomation

cds chromosome:12X:18_random:4247413:4260184:-1 gene:VIT_18s0001g05290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCAGTAATCCTAGCTTGTGTGTTAGATCCTCAAACCCCCCTTTAGGTGTTATCCAT
AGGCGAAATTCATTTTCATGGGACCTAAACACTCCTGTGGAGCTTGCCAAGCTATTTCTC
TCATACTTACCAATTCATCATTCAAGGTATAGTGCTGTTCTGTCACTGTCCCAAGGAATT
AACATGTCTACTCAAGTCTCAGCATGTTCTCTAGCCCAGATTCCTAAACCCAAAAATCGT
CCCGTGACAAATTTTCACCCCAACATTTGGGGTGACCAATTTATCACCTACACCCCTGAA
GACAAGGTTACACGTGCCTGCAAAGTGGAGCAGATTGAGGATCTGAAAAAGGAAGTGAAA
AGGAAATTAACGGCTGCTACTGCTAACCATTCCCTATTGCTGAACTTCATTGATGCAGTG
CAACGGCTTGGGGTGGCATACCACTTTGAACAAGAGATAGAAGAAGCGTTACAACATATT
TATGAGAGTTTTCATGACCTCAATGATATTGATGGTGATCTCTATAATGTTGCTCTTGGA
TTTCGACTACTAAGGCAACAAGGATACAGTATTTCATGTGGTATATTAAAAAAGTTTACG
GATGAACGAGGTAGATTCAAGGAAGTTTTGATCACAAATGTACGAGGCCTGCTAGGCTTG
TATGAAGCTGCACATCTCAGGGTTCATGGAGAGGACATACTTGCAGAAGCACTTACTTTC
ACCACCACTCACCTCAAGGCCATGGTAGAAAGTTTAGGATATCCTCTTGCAGAACAAGTT
GTTCATGCCCTGAACCGGCCCATTAGAAAAGGTTTGGAGAGGATAGAGGCAAGATGGTAT
ATATCCGTCTACCAAGATGAAGCTTTCCATGATAAAACTTTACTAGAGCTGGCAAAATTA
GATTTCAATCTAGTGCAGTCACTGCACAGGGAAGAGCTAAGCAATCTTGCAAGGTGGTGG
AAAGAATTAGACTTTGCTACAAAGTTACCTTTTGCACGAGACAGATTGGTTGAAGGCTAC
TTCTGGATACTTGGGGTGTATTTTGAGCCTCAATACTTACGGGCTAGACGAATTCTAACC
AAAGTAATTGCTATGACATCCATTCTAGATGATATCTATGATGCATATGGTAATCCTGAA
GAACTCAAGCTCTTCACAGAAGCCATTGAGAGGTGGGATATTAACAGCATAGATCAGCTT
CCAGAATACATGAAACTCTGCTATGCGGCACTCTTAGATGTGTACAAAGAAATCGAGGAA
GAGATGGAGAAAGAAGGAAACCAATATCGGGTTCACTATGCCAAAGAAGTAATGAAGAAT
CAAGTTCGAGCTTACTTTGCTGAGGCCAAATGGTTACATGAAGAACACGTGCCAACAATC
GAAGAGTACTTGCGTGTTGCACTAGTAAGCTCTGGATACTGCATGCTTGCAACCACGTCC
TTGGTGGGAATGGGAGAAATAGCAACAAAGGAGGCCTTTGATTGGGTGACCAGCGATCCT
AAGATTATGTCATCTTCAAATTTTATTGCAAGGCTCATGGATGACATCTCATCACATAAG
TTTGAGCAAAAGAGAGAGCATGTGGCCTCAGCCATTGAATGTTACATGAAGCAATATGGT
GTCTCTGAAGAACAGGCATACAGTGAGTTTCGAAAGCAAATTGAGAATGCATGGATGGAT
ATTAACCAGGAATGCCTCAAACCTACTGCTGTTCCAATGCCTCTCCTTGCTCGTGTTCTC
AATCTTACACGAGCCGCGGATGTCATTTACAAAGAGCAAGACAGTTACACACATGTTGGG
AAAGTGATGAAGAATAACATTGCGGCTTTCTTCATTAACCCTATAATATAA

Peptide Sequence

PEP ID

VIT_18s0001g05290.t01
PEP Infomation

pep chromosome:12X:18_random:4247413:4260184:-1 gene:VIT_18s0001g05290 transcript:VIT_18s0001g05290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSNPSLCVRSSNPPLGVIHRRNSFSWDLNTPVELAKLFLSYLPIHHSRYSAVLSLSQGI
NMSTQVSACSLAQIPKPKNRPVTNFHPNIWGDQFITYTPEDKVTRACKVEQIEDLKKEVK
RKLTAATANHSLLLNFIDAVQRLGVAYHFEQEIEEALQHIYESFHDLNDIDGDLYNVALG
FRLLRQQGYSISCGILKKFTDERGRFKEVLITNVRGLLGLYEAAHLRVHGEDILAEALTF
TTTHLKAMVESLGYPLAEQVVHALNRPIRKGLERIEARWYISVYQDEAFHDKTLLELAKL
DFNLVQSLHREELSNLARWWKELDFATKLPFARDRLVEGYFWILGVYFEPQYLRARRILT
KVIAMTSILDDIYDAYGNPEELKLFTEAIERWDINSIDQLPEYMKLCYAALLDVYKEIEE
EMEKEGNQYRVHYAKEVMKNQVRAYFAEAKWLHEEHVPTIEEYLRVALVSSGYCMLATTS
LVGMGEIATKEAFDWVTSDPKIMSSSNFIARLMDDISSHKFEQKREHVASAIECYMKQYG
VSEEQAYSEFRKQIENAWMDINQECLKPTAVPMPLLARVLNLTRAADVIYKEQDSYTHVG
KVMKNNIAAFFINPII

Transcript Sequence

Transcript ID

VIT_18s0001g05290.t01
Transcript Infomation

cdna chromosome:12X:18_random:4247413:4260184:-1 gene:VIT_18s0001g05290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCAGTAATCCTAGCTTGTGTGTTAGATCCTCAAACCCCCCTTTAGGTGTTATCCAT
AGGCGAAATTCATTTTCATGGGACCTAAACACTCCTGTGGAGCTTGCCAAGCTATTTCTC
TCATACTTACCAATTCATCATTCAAGGTATAGTGCTGTTCTGTCACTGTCCCAAGGAATT
AACATGTCTACTCAAGTCTCAGCATGTTCTCTAGCCCAGATTCCTAAACCCAAAAATCGT
CCCGTGACAAATTTTCACCCCAACATTTGGGGTGACCAATTTATCACCTACACCCCTGAA
GACAAGGTTACACGTGCCTGCAAAGTGGAGCAGATTGAGGATCTGAAAAAGGAAGTGAAA
AGGAAATTAACGGCTGCTACTGCTAACCATTCCCTATTGCTGAACTTCATTGATGCAGTG
CAACGGCTTGGGGTGGCATACCACTTTGAACAAGAGATAGAAGAAGCGTTACAACATATT
TATGAGAGTTTTCATGACCTCAATGATATTGATGGTGATCTCTATAATGTTGCTCTTGGA
TTTCGACTACTAAGGCAACAAGGATACAGTATTTCATGTGGTATATTAAAAAAGTTTACG
GATGAACGAGGTAGATTCAAGGAAGTTTTGATCACAAATGTACGAGGCCTGCTAGGCTTG
TATGAAGCTGCACATCTCAGGGTTCATGGAGAGGACATACTTGCAGAAGCACTTACTTTC
ACCACCACTCACCTCAAGGCCATGGTAGAAAGTTTAGGATATCCTCTTGCAGAACAAGTT
GTTCATGCCCTGAACCGGCCCATTAGAAAAGGTTTGGAGAGGATAGAGGCAAGATGGTAT
ATATCCGTCTACCAAGATGAAGCTTTCCATGATAAAACTTTACTAGAGCTGGCAAAATTA
GATTTCAATCTAGTGCAGTCACTGCACAGGGAAGAGCTAAGCAATCTTGCAAGGTGGTGG
AAAGAATTAGACTTTGCTACAAAGTTACCTTTTGCACGAGACAGATTGGTTGAAGGCTAC
TTCTGGATACTTGGGGTGTATTTTGAGCCTCAATACTTACGGGCTAGACGAATTCTAACC
AAAGTAATTGCTATGACATCCATTCTAGATGATATCTATGATGCATATGGTAATCCTGAA
GAACTCAAGCTCTTCACAGAAGCCATTGAGAGGTGGGATATTAACAGCATAGATCAGCTT
CCAGAATACATGAAACTCTGCTATGCGGCACTCTTAGATGTGTACAAAGAAATCGAGGAA
GAGATGGAGAAAGAAGGAAACCAATATCGGGTTCACTATGCCAAAGAAGTAATGAAGAAT
CAAGTTCGAGCTTACTTTGCTGAGGCCAAATGGTTACATGAAGAACACGTGCCAACAATC
GAAGAGTACTTGCGTGTTGCACTAGTAAGCTCTGGATACTGCATGCTTGCAACCACGTCC
TTGGTGGGAATGGGAGAAATAGCAACAAAGGAGGCCTTTGATTGGGTGACCAGCGATCCT
AAGATTATGTCATCTTCAAATTTTATTGCAAGGCTCATGGATGACATCTCATCACATAAG
TTTGAGCAAAAGAGAGAGCATGTGGCCTCAGCCATTGAATGTTACATGAAGCAATATGGT
GTCTCTGAAGAACAGGCATACAGTGAGTTTCGAAAGCAAATTGAGAATGCATGGATGGAT
ATTAACCAGGAATGCCTCAAACCTACTGCTGTTCCAATGCCTCTCCTTGCTCGTGTTCTC
AATCTTACACGAGCCGCGGATGTCATTTACAAAGAGCAAGACAGTTACACACATGTTGGG
AAAGTGATGAAGAATAACATTGCGGCTTTCTTCATTAACCCTATAATATAACCAAATGGA
TGAGTTGATTAACGTCCCGTATCTAATAAATCATTATAATAAGGTGAAGGAGTAATATGT
AATACATCATTGTAATAAGGTGAGATGGACACATTATATGTAGCACCTAGTTTCTCTGGG
TTTCAAAATAATTAAGTT