Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05270.t01
CDS Infomation

cds chromosome:12X:18:4225485:4241449:-1 gene:VIT_18s0001g05270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAACATAATCAACAAGCTTCGGAACTTGGATGCTTACCCTAAGATCAACGAGGAT
TTCTACAGCCGTACACTCTCCGGTGGCGTTATTACCCTCGCCTCATCTATTTTTATGCTC
TTGCTCTTCATCTCCGAGCTCAGGTTATATCTCCATGCTGTAACAGAAACAAAGCTTGTT
GTAGATACTTCAAGAGGAGAAACACTACGTATCAATTTTGATGTCACTTTTCCTGCCCTT
CCATGTTCCATACTCAGTCTTGATGCCATGGATATAAGTGGAGAGCAACATCTTGATGTG
AGACATGACATAATCAAGAAAAGAATAGATGCCCATGGCAGTGTTATAGAAGCAAGGCAG
GATGGGATTGGTTCTCCTAAGATTGAAAAGCCTTTACAGAAACATGGAGGCAGGCTTGAG
CATAACGAAACGTATTGTGGGTCATGTTATGGTGCAGAAGCGTCAGATGATGATTGTTGT
AATAACTGTGAAGAAGTTCGTGAAGCATACCGGAAGAAAGGTTGGGCGATGTCAAATCCA
GATTTGATTGACCAGTGCAAGAGAGAAGGTTTTCTGCAAAGGATTAAAGATGAAGAAGGT
GAAGGGTGTAATATATATGGATTCTTGGAAGTTAATAAGGTTGCTGGGAATTTCCATTTT
GCACCTGGGAAAAGCTTTCAACAATCAAATATTCATGTACACGATCTGCTGGCATTTCAA
AAGGATAGCTTTAATATTAGTCACAAGATCAACAGGTTAGCTTTTGGAGACTATTTCCCT
GGTGTTGTGAATCCTCTCGATGGTGTGCAATGGATACAGGCAACTCCAAGTGGGATGTAT
CAGTATTTCATCAAGGTTGTACCCACTGTATATACACATGTGAGTGGGCACACTATCTCA
ACAAATCAGTTCTCTGTTACAGAACATTTTAGGAATGCAGAACTAGGTCGCCTTCAGTCT
CTTCCTGGAGTTTTCTTCTTCTATGACCTTTCTCCAATCAAGGTGACTTTCACAGAGGAG
CATGTGTCATTCTTGCACTTCCTAACAAATGTCTGTGCCATAGTTGGAGGTGTTTTCACT
GTTTCAGGGATATTAGATTCCTTCATATACCATAGTCAAAAGGCAATCAAGAAGAAGATA
GAAATTGGTAAATTTAGTTGA

Peptide Sequence

PEP ID

VIT_18s0001g05270.t01
PEP Infomation

pep chromosome:12X:18:4225485:4241449:-1 gene:VIT_18s0001g05270 transcript:VIT_18s0001g05270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDNIINKLRNLDAYPKINEDFYSRTLSGGVITLASSIFMLLLFISELRLYLHAVTETKLV
VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVRHDIIKKRIDAHGSVIEARQ
DGIGSPKIEKPLQKHGGRLEHNETYCGSCYGAEASDDDCCNNCEEVREAYRKKGWAMSNP
DLIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNIHVHDLLAFQ
KDSFNISHKINRLAFGDYFPGVVNPLDGVQWIQATPSGMYQYFIKVVPTVYTHVSGHTIS
TNQFSVTEHFRNAELGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT
VSGILDSFIYHSQKAIKKKIEIGKFS

Transcript Sequence

Transcript ID

VIT_18s0001g05270.t01
Transcript Infomation

cdna chromosome:12X:18:4225485:4241449:-1 gene:VIT_18s0001g05270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGAAAATACGATACCTTTCCCTTCTTAAGCGCGTCGTTTGGAGCCAATCAGCTCTGATT
CAGCGGGGCGTTTAATTGATGAGATTTTCTTTTCTTTTCGTTTCTTTTTCTTTTTAATTT
TAATAACTAAAATCGCACTAGATTAATACCATCGAACGATCAAACAACAATCTGTCTACG
GTGGTAGCCATGGACAACATAATCAACAAGCTTCGGAACTTGGATGCTTACCCTAAGATC
AACGAGGATTTCTACAGCCGTACACTCTCCGGTGGCGTTATTACCCTCGCCTCATCTATT
TTTATGCTCTTGCTCTTCATCTCCGAGCTCAGGTTATATCTCCATGCTGTAACAGAAACA
AAGCTTGTTGTAGATACTTCAAGAGGAGAAACACTACGTATCAATTTTGATGTCACTTTT
CCTGCCCTTCCATGTTCCATACTCAGTCTTGATGCCATGGATATAAGTGGAGAGCAACAT
CTTGATGTGAGACATGACATAATCAAGAAAAGAATAGATGCCCATGGCAGTGTTATAGAA
GCAAGGCAGGATGGGATTGGTTCTCCTAAGATTGAAAAGCCTTTACAGAAACATGGAGGC
AGGCTTGAGCATAACGAAACGTATTGTGGGTCATGTTATGGTGCAGAAGCGTCAGATGAT
GATTGTTGTAATAACTGTGAAGAAGTTCGTGAAGCATACCGGAAGAAAGGTTGGGCGATG
TCAAATCCAGATTTGATTGACCAGTGCAAGAGAGAAGGTTTTCTGCAAAGGATTAAAGAT
GAAGAAGGTGAAGGGTGTAATATATATGGATTCTTGGAAGTTAATAAGGTTGCTGGGAAT
TTCCATTTTGCACCTGGGAAAAGCTTTCAACAATCAAATATTCATGTACACGATCTGCTG
GCATTTCAAAAGGATAGCTTTAATATTAGTCACAAGATCAACAGGTTAGCTTTTGGAGAC
TATTTCCCTGGTGTTGTGAATCCTCTCGATGGTGTGCAATGGATACAGGCAACTCCAAGT
GGGATGTATCAGTATTTCATCAAGGTTGTACCCACTGTATATACACATGTGAGTGGGCAC
ACTATCTCAACAAATCAGTTCTCTGTTACAGAACATTTTAGGAATGCAGAACTAGGTCGC
CTTCAGTCTCTTCCTGGAGTTTTCTTCTTCTATGACCTTTCTCCAATCAAGGTGACTTTC
ACAGAGGAGCATGTGTCATTCTTGCACTTCCTAACAAATGTCTGTGCCATAGTTGGAGGT
GTTTTCACTGTTTCAGGGATATTAGATTCCTTCATATACCATAGTCAAAAGGCAATCAAG
AAGAAGATAGAAATTGGTAAATTTAGTTGATGACTAATTCGTTCAGCCTCCTTTGCTGCC
GTGTTTTTGGTTGGTTTGGAGAGGACCTACTTTAGAGAAGAGAAACTGTGAATGACTCTC
CCTGCAGGGTTGGCGGGCTTCTTTTGAACACAACTTAGGTTTTTCCATGTGATCTGTTTG
ATCAGTGAATTAGATTAATTTTCTGTTCCGCATTAATATTTACTACCACCTCTTTACCTA
GTGTTTTCAGTTATTTGTAATTGTACCAATGATGTGAATATCTGTTTGGAAGATAAGAGA
GATTTATCATTTTTCTCATGATGAGAACTGCTGGAAATTTCTTGATTAGAAATATCAAGA
ACAATAAAGGATGGGGGTGGGAGGTGGTTCTTTT