Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05240.t01
CDS Infomation

cds chromosome:12X:18_random:4217739:4219991:-1 gene:VIT_18s0001g05240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTTAATTCTCGCAACCAGCAACGGGTCTTCTCCAGCCCCAGTTGCTAATTCAGAG
ACTACTCGCCGAACTGCAAATTATCAGCCTAGCATTTGGGGCAATAGCTTCATCGTGAGC
AACACTCCTGAGGATGAGATAACTCTGGCCCATAAAGAGCAGCAGTTGGAAGATCTAAAG
GAGGAAGTTAGAAGAGAGCTGATAGCTGCAGCTAGTAACCCTTCGAAACAGCTGAAGTTT
ATCGATGCAATTCAACGGCTTGGGGTGGCATACCACTTTGAAAACGAGATAGAACAAGCA
TTACAAAGCACCTATGATAACTATCATGGCATTGCTGATATAAATGATGATCTCTATGAT
GTTGCACTTCGATTTCGACTACTAAGACAACAAGGCTTCAATATTTCATGTGATATATTC
AAGAGGTACAAAGATGAAAAGGGGAGGTTCAAGAAGTCTTTGATCAATGATCCATATGGC
CTACTAGGCTTGTATGAAGCTGCACATCTCAGGGTGTGGGAAGAAGATATACTAGATGAA
GCACTTCCTTTCACCACCACTCACCTCAAGTCTATTGTAGAACATTTAGAATACCCTCTT
GCAGCACAAGTAACTCATGCCCTAGAGCGGCCCATTAGGAAAGGCTTGGAGAGGCTAGAG
GCAAGGCCTTTCATGTCTATCTACCAAGATGAAGCTTCACATAGTAAAGCTTTACTGAAG
TTTGCAAAGTTAGATTTCAACCTACTGCAGTCACTGTATAAGAAAGAGCTGAGTAATATC
TCGAGGTGGTGGAAAGACCTAGATTTCTCTTCAAAGCTACCTTTTGCCAGAGATCGATTG
GTAGAAGGGTACTTTTGGATAGCAACATGTTGTTTTGAGCCCCAGTATTCATATGCTAGA
AGAATACAGACCAAATTACATGCTCTGATAACAACTATGGATGATATGTTTGATGCATAT
GGAACATTTGAAGAACTGGAGCTCTTTACAGAGGCAATCGGGAGGTGGGATATAAACAGC
GTACATCAGCTTCCTGAATACATGAAACCATGCTATCAGGCAGTCTTAGATGTCTACAAA
GAAATTGAGGAGATGGAAAACACAGAAAGATCATACTGTGTCCACCACACAAAAGATGCA
ATTAAAAGCTTGGTCCAAGCTTACTTGGTTGAAGCCAAATGGTTGCATGGAAAATACATA
CCGACAATAGAAGAGTACATGGGTATCGCAATGGTAACAGTTGGTGTCCCCGTGTTAACA
ATCATGTCTTTTATTGGCATGAGAGAGACTGCAACCAAAGAAGTCTTTGATTGGCTGCTA
CAAAACCCTAAGATTGTTAGAGCTACCTACATAATCATTAGGCTCATGGATGACATGGCT
TCCCACAAGTTTGAGCAAGAGAGAGAGCATATTGCATCAAGCATCGAATGTTACATGAAG
CAACATGGTGTGTCGGAGCAGCAAGCATATGATGAGTTTCACAAGCAAACCGAGAATGCA
TGGAAGGATATAAATGAAGAGTGCCTCAGACCTACTACAGTGCCAATGCTTCTCCTTAGT
CGTCTTCTCAATTTTGCTCGATCAGGAGATGTGATGTACAAGAGCCACAAAGATATATTC
ACACATCCTGGAGAAGTGACGAAAAATAATATTTCAATGCTGCTCATAGACCCTGTGCCA
ATATGA

Peptide Sequence

PEP ID

VIT_18s0001g05240.t01
PEP Infomation

pep chromosome:12X:18_random:4217739:4219991:-1 gene:VIT_18s0001g05240 transcript:VIT_18s0001g05240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALILATSNGSSPAPVANSETTRRTANYQPSIWGNSFIVSNTPEDEITLAHKEQQLEDLK
EEVRRELIAAASNPSKQLKFIDAIQRLGVAYHFENEIEQALQSTYDNYHGIADINDDLYD
VALRFRLLRQQGFNISCDIFKRYKDEKGRFKKSLINDPYGLLGLYEAAHLRVWEEDILDE
ALPFTTTHLKSIVEHLEYPLAAQVTHALERPIRKGLERLEARPFMSIYQDEASHSKALLK
FAKLDFNLLQSLYKKELSNISRWWKDLDFSSKLPFARDRLVEGYFWIATCCFEPQYSYAR
RIQTKLHALITTMDDMFDAYGTFEELELFTEAIGRWDINSVHQLPEYMKPCYQAVLDVYK
EIEEMENTERSYCVHHTKDAIKSLVQAYLVEAKWLHGKYIPTIEEYMGIAMVTVGVPVLT
IMSFIGMRETATKEVFDWLLQNPKIVRATYIIIRLMDDMASHKFEQEREHIASSIECYMK
QHGVSEQQAYDEFHKQTENAWKDINEECLRPTTVPMLLLSRLLNFARSGDVMYKSHKDIF
THPGEVTKNNISMLLIDPVPI

Transcript Sequence

Transcript ID

VIT_18s0001g05240.t01
Transcript Infomation

cdna chromosome:12X:18_random:4217739:4219991:-1 gene:VIT_18s0001g05240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTTAATTCTCGCAACCAGCAACGGGTCTTCTCCAGCCCCAGTTGCTAATTCAGAG
ACTACTCGCCGAACTGCAAATTATCAGCCTAGCATTTGGGGCAATAGCTTCATCGTGAGC
AACACTCCTGAGGATGAGATAACTCTGGCCCATAAAGAGCAGCAGTTGGAAGATCTAAAG
GAGGAAGTTAGAAGAGAGCTGATAGCTGCAGCTAGTAACCCTTCGAAACAGCTGAAGTTT
ATCGATGCAATTCAACGGCTTGGGGTGGCATACCACTTTGAAAACGAGATAGAACAAGCA
TTACAAAGCACCTATGATAACTATCATGGCATTGCTGATATAAATGATGATCTCTATGAT
GTTGCACTTCGATTTCGACTACTAAGACAACAAGGCTTCAATATTTCATGTGATATATTC
AAGAGGTACAAAGATGAAAAGGGGAGGTTCAAGAAGTCTTTGATCAATGATCCATATGGC
CTACTAGGCTTGTATGAAGCTGCACATCTCAGGGTGTGGGAAGAAGATATACTAGATGAA
GCACTTCCTTTCACCACCACTCACCTCAAGTCTATTGTAGAACATTTAGAATACCCTCTT
GCAGCACAAGTAACTCATGCCCTAGAGCGGCCCATTAGGAAAGGCTTGGAGAGGCTAGAG
GCAAGGCCTTTCATGTCTATCTACCAAGATGAAGCTTCACATAGTAAAGCTTTACTGAAG
TTTGCAAAGTTAGATTTCAACCTACTGCAGTCACTGTATAAGAAAGAGCTGAGTAATATC
TCGAGGTGGTGGAAAGACCTAGATTTCTCTTCAAAGCTACCTTTTGCCAGAGATCGATTG
GTAGAAGGGTACTTTTGGATAGCAACATGTTGTTTTGAGCCCCAGTATTCATATGCTAGA
AGAATACAGACCAAATTACATGCTCTGATAACAACTATGGATGATATGTTTGATGCATAT
GGAACATTTGAAGAACTGGAGCTCTTTACAGAGGCAATCGGGAGGTGGGATATAAACAGC
GTACATCAGCTTCCTGAATACATGAAACCATGCTATCAGGCAGTCTTAGATGTCTACAAA
GAAATTGAGGAGATGGAAAACACAGAAAGATCATACTGTGTCCACCACACAAAAGATGCA
ATTAAAAGCTTGGTCCAAGCTTACTTGGTTGAAGCCAAATGGTTGCATGGAAAATACATA
CCGACAATAGAAGAGTACATGGGTATCGCAATGGTAACAGTTGGTGTCCCCGTGTTAACA
ATCATGTCTTTTATTGGCATGAGAGAGACTGCAACCAAAGAAGTCTTTGATTGGCTGCTA
CAAAACCCTAAGATTGTTAGAGCTACCTACATAATCATTAGGCTCATGGATGACATGGCT
TCCCACAAGTTTGAGCAAGAGAGAGAGCATATTGCATCAAGCATCGAATGTTACATGAAG
CAACATGGTGTGTCGGAGCAGCAAGCATATGATGAGTTTCACAAGCAAACCGAGAATGCA
TGGAAGGATATAAATGAAGAGTGCCTCAGACCTACTACAGTGCCAATGCTTCTCCTTAGT
CGTCTTCTCAATTTTGCTCGATCAGGAGATGTGATGTACAAGAGCCACAAAGATATATTC
ACACATCCTGGAGAAGTGACGAAAAATAATATTTCAATGCTGCTCATAGACCCTGTGCCA
ATATGA