Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05220.t01
CDS Infomation

cds chromosome:12X:18:4205002:4212978:1 gene:VIT_18s0001g05220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGAGTTTCAGAACCCTGATTTGGAATACGTTGTTGATGACTACTACGACATGACC
GATTTTGAAGAAGACTCTTTTTCTGAGACCGATCCACAGAGGAACAGTCCCTTTGAGGCT
TTCGACTCGGACGTTGAAGACAACTTTGAAATGAACAAGCCAAAGACTGATACCTCTGCT
CTGGAAGCTAGAAATGGGAAAGATATACAGGGAATTCCCTGGGAGAGGCTTAATTTTACT
AGAGATAAGTATCGGGAGACAAGATTGGAACAATACAAGAATTATGAGAACCTATCGCGC
CCTCGGGAAGAGCTTGAAAAGGACTGCAAGAAAATAGAGAAGGGAAGCACCTTCTATGAT
TTTCAGTTCAACACAAGGCTTGTCAAGTCAACCATTGTGCATTTCCAGCTGAGGAATTTG
TTATGGGCAACATCGAAGCATGATGTATACCTTATGCAGAACTACTCAGTAATGCACTGG
TCCTCATTGCTGAGGAGGGGTAAAGAAGTACTAAACGTGGCTAAACCAATTGTTTCCACA
CTGAAGTGCCCAGGATCTTTGGGGCAGTCACTCTCAAGAGTGCAGATAAGCACTATGACC
GTTAAAGAGAACTTAATGGTGGCAGGTGGTTTTCAGGGAGAGCTTATTTGCAAGAATTTG
AGTCAGCCTGGGGTTGCATTTTGTGCAAAATTAACCACAGATGATAATGCCATCACCAAT
GCGGTTGATGTATACCATAACCCCAATGGCTCGTTGAGGGTCATGGCTGCAAACAACGAC
GCTGAAGTTAGGATCTTTGATGCTGAGAACTTCGCTTGCCTTAATCGGTTCACCTACCCT
TGGTCTGTAAATAACACCTCTGTTAGCCCAGATGGAAAGCTGCTAGCTGTCCTTGGTGAT
AGTGCAGAGTGCTTGCTAGCTGATGCTCAGACAGGGAAAGTTGTTGCAACCCTTAAGGGG
CACTTGGACTATTCGTTTGCTTCAGCTTGGCACCCAGATGGACGAACATTGGCGACTGGA
AACCAGGACACAACATGTAGACTCTGGGACATACGGAACCTTTCCGAGTCTCAGGCGGTA
CTTAAGGGAAGGATGGGAGCAATACGAGCTGTGAGGTTCTCTTCAGATGGTCGATTTATG
GCTATGGCTGAGCCTGCAGACTTTGTCCATGTCTTTGACACGGAGTCAGGTTATGTGAAG
GGGCAGGAGATTGATCTTTTTGGCGAGATTGCTGGAATATCCTTCAGTCCTGACACAGAA
GCTCTTTTTGTTGGGATTGCGGATCGCACCTACGGTAGCTTATTAGAATTCAACAGGAGG
AGGTGTAATCAGTATTTGGATTCCATTATATAG

Peptide Sequence

PEP ID

VIT_18s0001g05220.t01
PEP Infomation

pep chromosome:12X:18:4205002:4212978:1 gene:VIT_18s0001g05220 transcript:VIT_18s0001g05220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEFQNPDLEYVVDDYYDMTDFEEDSFSETDPQRNSPFEAFDSDVEDNFEMNKPKTDTSA
LEARNGKDIQGIPWERLNFTRDKYRETRLEQYKNYENLSRPREELEKDCKKIEKGSTFYD
FQFNTRLVKSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLRRGKEVLNVAKPIVST
LKCPGSLGQSLSRVQISTMTVKENLMVAGGFQGELICKNLSQPGVAFCAKLTTDDNAITN
AVDVYHNPNGSLRVMAANNDAEVRIFDAENFACLNRFTYPWSVNNTSVSPDGKLLAVLGD
SAECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDTTCRLWDIRNLSESQAV
LKGRMGAIRAVRFSSDGRFMAMAEPADFVHVFDTESGYVKGQEIDLFGEIAGISFSPDTE
ALFVGIADRTYGSLLEFNRRRCNQYLDSII

Transcript Sequence

Transcript ID

VIT_18s0001g05220.t01
Transcript Infomation

cdna chromosome:12X:18:4205002:4212978:1 gene:VIT_18s0001g05220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTAGTTCTACACTCTTCTCTTCATTCTCTCCCTTCAGACCTTCCAAATCTGTCTTTTAA
GTTTACACATCTTCATTCCACGTTCACAAGCCACCATTTTCTTTCATTCAGACTGAGAGA
GAAACTCTTTACTCTGTTTCTTTCGTTTATCTGCTTCTTGATTCGGAGATCTTTGATTGT
TTACGATCTGTTCTGCTCCAGGCTTGGAAACCTTTTCTTGCCAGCATTCGAAGGATAATG
GCAGAGTTTCAGAACCCTGATTTGGAATACGTTGTTGATGACTACTACGACATGACCGAT
TTTGAAGAAGACTCTTTTTCTGAGACCGATCCACAGAGGAACAGTCCCTTTGAGGCTTTC
GACTCGGACGTTGAAGACAACTTTGAAATGAACAAGCCAAAGACTGATACCTCTGCTCTG
GAAGCTAGAAATGGGAAAGATATACAGGGAATTCCCTGGGAGAGGCTTAATTTTACTAGA
GATAAGTATCGGGAGACAAGATTGGAACAATACAAGAATTATGAGAACCTATCGCGCCCT
CGGGAAGAGCTTGAAAAGGACTGCAAGAAAATAGAGAAGGGAAGCACCTTCTATGATTTT
CAGTTCAACACAAGGCTTGTCAAGTCAACCATTGTGCATTTCCAGCTGAGGAATTTGTTA
TGGGCAACATCGAAGCATGATGTATACCTTATGCAGAACTACTCAGTAATGCACTGGTCC
TCATTGCTGAGGAGGGGTAAAGAAGTACTAAACGTGGCTAAACCAATTGTTTCCACACTG
AAGTGCCCAGGATCTTTGGGGCAGTCACTCTCAAGAGTGCAGATAAGCACTATGACCGTT
AAAGAGAACTTAATGGTGGCAGGTGGTTTTCAGGGAGAGCTTATTTGCAAGAATTTGAGT
CAGCCTGGGGTTGCATTTTGTGCAAAATTAACCACAGATGATAATGCCATCACCAATGCG
GTTGATGTATACCATAACCCCAATGGCTCGTTGAGGGTCATGGCTGCAAACAACGACGCT
GAAGTTAGGATCTTTGATGCTGAGAACTTCGCTTGCCTTAATCGGTTCACCTACCCTTGG
TCTGTAAATAACACCTCTGTTAGCCCAGATGGAAAGCTGCTAGCTGTCCTTGGTGATAGT
GCAGAGTGCTTGCTAGCTGATGCTCAGACAGGGAAAGTTGTTGCAACCCTTAAGGGGCAC
TTGGACTATTCGTTTGCTTCAGCTTGGCACCCAGATGGACGAACATTGGCGACTGGAAAC
CAGGACACAACATGTAGACTCTGGGACATACGGAACCTTTCCGAGTCTCAGGCGGTACTT
AAGGGAAGGATGGGAGCAATACGAGCTGTGAGGTTCTCTTCAGATGGTCGATTTATGGCT
ATGGCTGAGCCTGCAGACTTTGTCCATGTCTTTGACACGGAGTCAGGTTATGTGAAGGGG
CAGGAGATTGATCTTTTTGGCGAGATTGCTGGAATATCCTTCAGTCCTGACACAGAAGCT
CTTTTTGTTGGGATTGCGGATCGCACCTACGGTAGCTTATTAGAATTCAACAGGAGGAGG
TGTAATCAGTATTTGGATTCCATTATATAGTGGAATGGAAATCTGAAGTTGGCGGCTAAA
AATTGGGAATGAAGCATAATAATTTATTGGGTTGAGGTGGATGTGCATAGGTAGCATAGG
TTGGAGGCTTAGATTTTTGGCCTGTCGGCTTAAAGGTTGTTGTTTTCCAGTTTTTTGGAT
AACGGATTACATTTTGGCTGCCCAAGTGGAGAAAGCTAGAGGCATTTGGGAACTCTTTTT
CTTGTAAATGTGATTTCCTTTTCGAATCGGAAATGTGAGATAAATTTTTTCTGGTGTAAA
GAATGTTGATGTGATTTTAGTTTGTA