Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05180.t01
CDS Infomation

cds chromosome:12X:18:4185500:4189977:-1 gene:VIT_18s0001g05180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAACTCCACAGCTTGCTTCTCATAAACCTCATCTACGTTACTGTCATCCTGGTAGGA
GTTGAGTCCACTCAATCTCCTCCGTTCTCCTGTGATTCCTCTAACCCATCAACCAAATCA
TACCACTTCTGCAAAACCACATTACCCATACCTGACAGGGTCCGTGACCTGGTGTCTCGT
CTCACATTGGACGAGAAAATCTCCCAGCTTGTTAACTCCGCCCCGGCCATTCCACGCTTG
GGTATCCCCGCTTACGAATGGTGGTCGGAAGCGTTACACGGAGTGGCCGATGCTGGACCG
GGCATCAGGTTCAACGGCACCATTCGTTCCGCCACCAGCTTCCCTCAAGTCATCCTCACT
GCTGCCTCCTTCGATGTTCATCTCTGGTACCGCATCGGACGGGCGATCGGAGTGGAAGCT
AGAGCTGTGTACAATGCGGGACAAACTAAGGGTATGACATTCTGGGCACCAAATATAAAC
ATATTCAGGGACCCCAGATGGGGAAGAGGTCAAGAGACCCCCGGCGAAGATCCACTGGTC
ACGGGAAGCTATGCAGTGTCCTACGTCAGAGGGGTTCAAGGGGATTGTCTTCGAGGACTG
AAACGGTGTGGTGAGCTTCAGGCTTCGGCTTGTTGCAAACACTTCACCGCCTATGATTTG
GACGACTGGAAGGGCATCGATAGATTTAAGTTTGACGCCCGTGTGACAATGCAAGATTTG
GCAGATACATACCAACCACCATTCCACAGATGCATAGAGGAAGGGAGGGCGAGTGGGATA
ATGTGTGCTTACAACCGAGTGAATGGAGTCCCAAGCTGTGCCGATTTCAATCTCTTGACC
AATACTGCCAGGAAAAGATGGAACTTCCAAGGGTACATCACGTCCGACTGTGATGCTGTG
TCCCTCATTCATGATTCTTATGGATTTGCCAAAACACCCGAGGATGCAGTTGTGGATGTT
CTTAAGGCTGGCATGGACGTAAACTGTGGCACCTACTTGCTGAATCATACGAAATCAGCA
GTTATGCAGAAAAAACTGCCTGAATCTGAACTAGACAGAGCCCTTGAGAATCTCTTCGCT
GTGAGAATGAGGTTAGGTCTTTTCAATGGCAATCCCAAGGGACAACCTTACGGTGACATC
GGTCCAAACCAAGTCTGCTCGGTGGAGCATCAGACTCTGGCCCTGGATGCTGCTCGGGAC
GGCATTGTCCTTCTAAAGAACTCTCAGAGGCTCCTTCCACTTCCCAAAGGAAAAACCATG
TCCCTCGCTGTAATAGGCCCGAATGCCAATTCCCCAAAAACGCTAATTGGAAATTATGCA
GGGCCTCCCTGTAAATTCATCACACCATTGCAAGCACTGCAGAGCTATGTTAAGAGCACA
ATGTATCACCCAGGTTGCGATGCGGTTGCATGCTCTTCCCCATCAATAGAAAAGGCAGTG
GAGATAGCCCAAAAAGCTGATTATGTGGTTCTGGTTATGGGATTGGATCAAACTCAAGAG
AGGGAGGCCCATGATCGTTTGGACTTGGTGCTCCCAGGAAAGCAACAGCAACTCATCATC
TGTGTTGCGAACGCTGCAAAGAAGCCAGTTGTGTTGGTGCTTCTTAGCGGAGGCCCTGTG
GATATATCTTTTGCCAAATACAGCAACAACATTGGAAGCATCTTGTGGGCTGGTTATCCA
GGCGGAGCTGGTGGGGCTGCAATTGCAGAAACCATCTTCGGTGACCATAACCCAGGGGGG
AGATTGCCGGTTACTTGGTATCCACAAGATTTTACTAAAATACCAATGACAGACATGAGG
ATGCGGCCTGAATCAAATTCAGGCTATCCTGGGCGCACTTACAGATTCTACACAGGGGAA
AAGGTTTTTGAATTTGGCTATGGCCTCAGCTACTCAACCTATTCTTGTGAGACCATCCCT
GTCACCCGCAATAAGCTCTATTTCAATCAGTCCTCAACTGCTCACGTGTATGAGAACACA
GATTCCATCCGTTACACCTCAGTTGCAGAGCTGGGGAAAGAGTTATGTGATTCCAACAAC
ATATCGATCTCCATTAGAGTCAGAAATGATGGAGAGATGGCGGGTAAACATTCGGTGTTG
CTATTTGTAAGGCGTTTGAAGGCCAGTGCTGGGAGTCCCATAAAACAGCTGGTTGCATTT
CAGAGTGTGCATCTGAATGGGGGGGAAAGCGCTGATGTTGGGTTTTTGTTGAACCCTTGT
GAGCACTTCAGCGGACCCAACAAAGATGGGCTGATGGTGATAGAAGAAGGGACTCATTTC
TTGGTTGTAGGAGATCAGGAACATCCAGTTACCGTTGTAGTATGA

Peptide Sequence

PEP ID

VIT_18s0001g05180.t01
PEP Infomation

pep chromosome:12X:18:4185500:4189977:-1 gene:VIT_18s0001g05180 transcript:VIT_18s0001g05180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLHSLLLINLIYVTVILVGVESTQSPPFSCDSSNPSTKSYHFCKTTLPIPDRVRDLVSR
LTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVADAGPGIRFNGTIRSATSFPQVILT
AASFDVHLWYRIGRAIGVEARAVYNAGQTKGMTFWAPNINIFRDPRWGRGQETPGEDPLV
TGSYAVSYVRGVQGDCLRGLKRCGELQASACCKHFTAYDLDDWKGIDRFKFDARVTMQDL
ADTYQPPFHRCIEEGRASGIMCAYNRVNGVPSCADFNLLTNTARKRWNFQGYITSDCDAV
SLIHDSYGFAKTPEDAVVDVLKAGMDVNCGTYLLNHTKSAVMQKKLPESELDRALENLFA
VRMRLGLFNGNPKGQPYGDIGPNQVCSVEHQTLALDAARDGIVLLKNSQRLLPLPKGKTM
SLAVIGPNANSPKTLIGNYAGPPCKFITPLQALQSYVKSTMYHPGCDAVACSSPSIEKAV
EIAQKADYVVLVMGLDQTQEREAHDRLDLVLPGKQQQLIICVANAAKKPVVLVLLSGGPV
DISFAKYSNNIGSILWAGYPGGAGGAAIAETIFGDHNPGGRLPVTWYPQDFTKIPMTDMR
MRPESNSGYPGRTYRFYTGEKVFEFGYGLSYSTYSCETIPVTRNKLYFNQSSTAHVYENT
DSIRYTSVAELGKELCDSNNISISIRVRNDGEMAGKHSVLLFVRRLKASAGSPIKQLVAF
QSVHLNGGESADVGFLLNPCEHFSGPNKDGLMVIEEGTHFLVVGDQEHPVTVVV

Transcript Sequence

Transcript ID

VIT_18s0001g05180.t01
Transcript Infomation

cdna chromosome:12X:18:4185500:4189977:-1 gene:VIT_18s0001g05180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCCGAAATAGATGTGTGAACTTACTAATTAGGTGGGTGAAAAGTTAAAACAACAAAAG
CACAGCTGTAGTTGGTGAATTGAAGTACGGTCTAAGGTGTCATATATCAGTGAGAGCTTC
CAACGCTTTGAAGTTCATTTCTTCTTCTCCACCATTCCACATACCCACAAAATGAAACTC
CACAGCTTGCTTCTCATAAACCTCATCTACGTTACTGTCATCCTGGTAGGAGTTGAGTCC
ACTCAATCTCCTCCGTTCTCCTGTGATTCCTCTAACCCATCAACCAAATCATACCACTTC
TGCAAAACCACATTACCCATACCTGACAGGGTCCGTGACCTGGTGTCTCGTCTCACATTG
GACGAGAAAATCTCCCAGCTTGTTAACTCCGCCCCGGCCATTCCACGCTTGGGTATCCCC
GCTTACGAATGGTGGTCGGAAGCGTTACACGGAGTGGCCGATGCTGGACCGGGCATCAGG
TTCAACGGCACCATTCGTTCCGCCACCAGCTTCCCTCAAGTCATCCTCACTGCTGCCTCC
TTCGATGTTCATCTCTGGTACCGCATCGGACGGGCGATCGGAGTGGAAGCTAGAGCTGTG
TACAATGCGGGACAAACTAAGGGTATGACATTCTGGGCACCAAATATAAACATATTCAGG
GACCCCAGATGGGGAAGAGGTCAAGAGACCCCCGGCGAAGATCCACTGGTCACGGGAAGC
TATGCAGTGTCCTACGTCAGAGGGGTTCAAGGGGATTGTCTTCGAGGACTGAAACGGTGT
GGTGAGCTTCAGGCTTCGGCTTGTTGCAAACACTTCACCGCCTATGATTTGGACGACTGG
AAGGGCATCGATAGATTTAAGTTTGACGCCCGTGTGACAATGCAAGATTTGGCAGATACA
TACCAACCACCATTCCACAGATGCATAGAGGAAGGGAGGGCGAGTGGGATAATGTGTGCT
TACAACCGAGTGAATGGAGTCCCAAGCTGTGCCGATTTCAATCTCTTGACCAATACTGCC
AGGAAAAGATGGAACTTCCAAGGGTACATCACGTCCGACTGTGATGCTGTGTCCCTCATT
CATGATTCTTATGGATTTGCCAAAACACCCGAGGATGCAGTTGTGGATGTTCTTAAGGCT
GGCATGGACGTAAACTGTGGCACCTACTTGCTGAATCATACGAAATCAGCAGTTATGCAG
AAAAAACTGCCTGAATCTGAACTAGACAGAGCCCTTGAGAATCTCTTCGCTGTGAGAATG
AGGTTAGGTCTTTTCAATGGCAATCCCAAGGGACAACCTTACGGTGACATCGGTCCAAAC
CAAGTCTGCTCGGTGGAGCATCAGACTCTGGCCCTGGATGCTGCTCGGGACGGCATTGTC
CTTCTAAAGAACTCTCAGAGGCTCCTTCCACTTCCCAAAGGAAAAACCATGTCCCTCGCT
GTAATAGGCCCGAATGCCAATTCCCCAAAAACGCTAATTGGAAATTATGCAGGGCCTCCC
TGTAAATTCATCACACCATTGCAAGCACTGCAGAGCTATGTTAAGAGCACAATGTATCAC
CCAGGTTGCGATGCGGTTGCATGCTCTTCCCCATCAATAGAAAAGGCAGTGGAGATAGCC
CAAAAAGCTGATTATGTGGTTCTGGTTATGGGATTGGATCAAACTCAAGAGAGGGAGGCC
CATGATCGTTTGGACTTGGTGCTCCCAGGAAAGCAACAGCAACTCATCATCTGTGTTGCG
AACGCTGCAAAGAAGCCAGTTGTGTTGGTGCTTCTTAGCGGAGGCCCTGTGGATATATCT
TTTGCCAAATACAGCAACAACATTGGAAGCATCTTGTGGGCTGGTTATCCAGGCGGAGCT
GGTGGGGCTGCAATTGCAGAAACCATCTTCGGTGACCATAACCCAGGGGGGAGATTGCCG
GTTACTTGGTATCCACAAGATTTTACTAAAATACCAATGACAGACATGAGGATGCGGCCT
GAATCAAATTCAGGCTATCCTGGGCGCACTTACAGATTCTACACAGGGGAAAAGGTTTTT
GAATTTGGCTATGGCCTCAGCTACTCAACCTATTCTTGTGAGACCATCCCTGTCACCCGC
AATAAGCTCTATTTCAATCAGTCCTCAACTGCTCACGTGTATGAGAACACAGATTCCATC
CGTTACACCTCAGTTGCAGAGCTGGGGAAAGAGTTATGTGATTCCAACAACATATCGATC
TCCATTAGAGTCAGAAATGATGGAGAGATGGCGGGTAAACATTCGGTGTTGCTATTTGTA
AGGCGTTTGAAGGCCAGTGCTGGGAGTCCCATAAAACAGCTGGTTGCATTTCAGAGTGTG
CATCTGAATGGGGGGGAAAGCGCTGATGTTGGGTTTTTGTTGAACCCTTGTGAGCACTTC
AGCGGACCCAACAAAGATGGGCTGATGGTGATAGAAGAAGGGACTCATTTCTTGGTTGTA
GGAGATCAGGAACATCCAGTTACCGTTGTAGTATGATCTATACAAAGGATGGTTCCTCCT
TTGTATGCCTCATAAGACAGGCTCTGCCAGTCATCGATTTTAAAATTGATGTTTTCCTAA
GCCTACGTATATCAAACAAAATCTTAAATA