Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05080.t01
CDS Infomation

cds chromosome:12X:18:4148968:4155129:-1 gene:VIT_18s0001g05080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTACTGGTCTAAAGAAATCTCCTTCAAATGGCTATGAGAAACCTTCAACATCTAAA
GAACAGCAGGAGAAGATTAATGAGGTGAGAAGATTGATAGGGCCATTGCCAGATAGGTTG
TCTATTTACTGTTCTGATGCATCAATAGCCAGATACTTAACGGCACGAAACTGGAATGTC
AAGAAGGCAACTAAAATGCTGAAAGAAACTTTGAAATGGAGATCAGAATACAAACCAGAA
GAGATTCGCTGGGAAGACATTGCTCAAGAAGCAGAGACTGGAAAAATATACAGGGCAAAT
TATATTGACAAACATGGGAGAACAGTTCTTGTCATGAAACCAAGCTGCCAGAACTCGAAG
TCAACAAAAGGGCAAATTAAATATTTGGTGTATTGCATGGAGAATGCCATTTTAAATCTG
CCACCCAACCAAGAGCAGATGGTATGGATGATTGACTTTCAGGGTTTCAATTTGTCAAAT
ATTTCAGTGAAGTTGACTCGGGAAACAGCCCATGTTCTACAAGACCGTTACCCAGAACGG
TTGGGTCTAGCAATACTATACAACCCACCCAAGTTCTTTGAACCATTCTGGACGGTGGTA
AAACCGTTTCTGGAGCCGAAGACTTGTAAAAAAGTAAAGTTTGTGTACTCTGATGATCTC
AATGCCAAGAAGATAATGGAGGACCTATTTGATATGGACAAGCTTGAGTCTGCATTTGGT
GGGAATGATACCGTGGGTTTTAATATTAATAAATATTCTGAAAGCATGAGAGAAGACGAT
AAGAAGATGCCATCTTTTTGGACAAAAGATAGTCATCCTTCAGGAGCCGCCCTGCAACCA
GCCCTGGCAAATGACCCCACTTTGACTCCTATCAACCTACAGTCAGATTCTGATGCTTCA
GACAAAGAGAGAGCTGAGAATCCCCCCTCTTTGACTCATATTAACTTACAGTCAGATTCT
GATGCTTCAGACAAAGAGAGAGCAGAGAATTCCCCCTCTCATGGTGTAAATTCAGGAGAA
GGTCCTCTAGACAACAATGTGCTGGTGAGTGATGAAAGCAGAAATGGAGCGGTAGGTATA
CATTAA

Peptide Sequence

PEP ID

VIT_18s0001g05080.t01
PEP Infomation

pep chromosome:12X:18:4148968:4155129:-1 gene:VIT_18s0001g05080 transcript:VIT_18s0001g05080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSTGLKKSPSNGYEKPSTSKEQQEKINEVRRLIGPLPDRLSIYCSDASIARYLTARNWNV
KKATKMLKETLKWRSEYKPEEIRWEDIAQEAETGKIYRANYIDKHGRTVLVMKPSCQNSK
STKGQIKYLVYCMENAILNLPPNQEQMVWMIDFQGFNLSNISVKLTRETAHVLQDRYPER
LGLAILYNPPKFFEPFWTVVKPFLEPKTCKKVKFVYSDDLNAKKIMEDLFDMDKLESAFG
GNDTVGFNINKYSESMREDDKKMPSFWTKDSHPSGAALQPALANDPTLTPINLQSDSDAS
DKERAENPPSLTHINLQSDSDASDKERAENSPSHGVNSGEGPLDNNVLVSDESRNGAVGI
H

Transcript Sequence

Transcript ID

VIT_18s0001g05080.t01
Transcript Infomation

cdna chromosome:12X:18:4148968:4155129:-1 gene:VIT_18s0001g05080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCGATTCTGTTTCCTTGAAGACTTCTGGAGCGCACTCTTCACCCTAATCTCCTTCACT
CGATTCATCCGATTTCTGTGCTTCTGGGCTGTTGAGGAGGAGTTGTCAGGTTATCGTCTC
CTTTTCCTCGTTCAATCAGGGATTCTCATTTTGAAACAATGAGTACTGGTCTAAAGAAAT
CTCCTTCAAATGGCTATGAGAAACCTTCAACATCTAAAGAACAGCAGGAGAAGATTAATG
AGGTGAGAAGATTGATAGGGCCATTGCCAGATAGGTTGTCTATTTACTGTTCTGATGCAT
CAATAGCCAGATACTTAACGGCACGAAACTGGAATGTCAAGAAGGCAACTAAAATGCTGA
AAGAAACTTTGAAATGGAGATCAGAATACAAACCAGAAGAGATTCGCTGGGAAGACATTG
CTCAAGAAGCAGAGACTGGAAAAATATACAGGGCAAATTATATTGACAAACATGGGAGAA
CAGTTCTTGTCATGAAACCAAGCTGCCAGAACTCGAAGTCAACAAAAGGGCAAATTAAAT
ATTTGGTGTATTGCATGGAGAATGCCATTTTAAATCTGCCACCCAACCAAGAGCAGATGG
TATGGATGATTGACTTTCAGGGTTTCAATTTGTCAAATATTTCAGTGAAGTTGACTCGGG
AAACAGCCCATGTTCTACAAGACCGTTACCCAGAACGGTTGGGTCTAGCAATACTATACA
ACCCACCCAAGTTCTTTGAACCATTCTGGACGGTGGTAAAACCGTTTCTGGAGCCGAAGA
CTTGTAAAAAAGTAAAGTTTGTGTACTCTGATGATCTCAATGCCAAGAAGATAATGGAGG
ACCTATTTGATATGGACAAGCTTGAGTCTGCATTTGGTGGGAATGATACCGTGGGTTTTA
ATATTAATAAATATTCTGAAAGCATGAGAGAAGACGATAAGAAGATGCCATCTTTTTGGA
CAAAAGATAGTCATCCTTCAGGAGCCGCCCTGCAACCAGCCCTGGCAAATGACCCCACTT
TGACTCCTATCAACCTACAGTCAGATTCTGATGCTTCAGACAAAGAGAGAGCTGAGAATC
CCCCCTCTTTGACTCATATTAACTTACAGTCAGATTCTGATGCTTCAGACAAAGAGAGAG
CAGAGAATTCCCCCTCTCATGGTGTAAATTCAGGAGAAGGTCCTCTAGACAACAATGTGC
TGGTGAGTGATGAAAGCAGAAATGGAGCGGTAGGTATACATTAAGTTGAGTGAAATCATG
AACTATGAGCCTGATCTTGGTTAAGATAAGGTTATGGATTTAGACTTTCTGACTGCTTGA
CATTTAGTTAGCAACTCAAAATCAAGAGAATTTGTCAATAATTTTGTTGAGATGGTGGCA
AAACCTTTTGCCACCCAGAGTGAAGCAAATGGAGTTCAAACCAGGGATTTTTAAGGATTA
CATATTTTTTAAGTCCTCTTCTCATTGAGGACCTTCTCTC