Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05060.t01
CDS Infomation

cds chromosome:12X:18:4143615:4147853:1 gene:VIT_18s0001g05060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGCCATTGCATTTCATCAAACCGTTGGGACCCTGCATTCTCAAGGATATCTCAAT
AACTCTGGTTTTCACCATGAGTTTGGGAATGCTTCTGTGAAATTGATTCCAAGGGGTTCC
AAAGTCAATGTTGGATTATTGAAAAGAGGAAGTGGCAATTCTGGCAAGAGAAGTTTTGCT
GTAATTCAAGCCTCAACTGCTCATACATCAGTATCCGGTCCAGTGTCATCACCGTCAAGT
AACAGCACTAATGGGTCACCAAAGAAATCAAATGAAACTGCTTTGATCCTAATCCGACAC
GGTGAGTCTTTATGGAATGAAAAGAACCTGTTCACTGGTTGTGTTGATGTGCCCTTAACT
AGGAAGGGTGTAGAAGAGGCACTTGAAGCTGGAATGAGAATCAGCAACATTCCCATTGAC
ATGATCTATACATCTGCTTTAATTCGCTCACAGATGACTGCTATGCTAGCCATGACCCAG
CACCGTCGCAAGAAGGTGCCAATCATTATGCATAATGAGAGTGAACAGGCAAAAGCATGG
AGTCAAATTTACAGTGAAGACACCAAAAGGCAATCCATACCAGTTATAGCAGCTTGGCAA
TTGAATGAAAGAATGTATGGAGAATTACAGGGTCTCAATAAGCAGGAAACTGCAGATAGA
TATGGAAAGGAGCAGGTTCATGAGTGGCGTCGTAGTTATGATATACCTCCACCCAATGGC
GAGAGTTTGGAAATGTGCGCTGAAAGAGCTGTAGCTTATTTTAGAGAACATATTGAACCC
CAACTTCTGTCTGGAAAGCACATAATGATTGCTGCCCATGGGAATTCACTGAGGTCCATC
ATTATGTATCTGGACAAATTAACTTCTCAAGAGGTTATTAGCTTAGAACTATCAACAGGA
ATTCCCATGCTTTACATATTCAAAGAGGGAAAATTTATCAGGAGGGGAAGTCCTATAGGA
CCTGCTGAAGCTGGGGTTTATGCCTACACTAAGAGTTTGGCTCAATACAGGCAGAAGTTG
GATGATATGTTGCATTAA

Peptide Sequence

PEP ID

VIT_18s0001g05060.t01
PEP Infomation

pep chromosome:12X:18:4143615:4147853:1 gene:VIT_18s0001g05060 transcript:VIT_18s0001g05060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVAIAFHQTVGTLHSQGYLNNSGFHHEFGNASVKLIPRGSKVNVGLLKRGSGNSGKRSFA
VIQASTAHTSVSGPVSSPSSNSTNGSPKKSNETALILIRHGESLWNEKNLFTGCVDVPLT
RKGVEEALEAGMRISNIPIDMIYTSALIRSQMTAMLAMTQHRRKKVPIIMHNESEQAKAW
SQIYSEDTKRQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNG
ESLEMCAERAVAYFREHIEPQLLSGKHIMIAAHGNSLRSIIMYLDKLTSQEVISLELSTG
IPMLYIFKEGKFIRRGSPIGPAEAGVYAYTKSLAQYRQKLDDMLH

Transcript Sequence

Transcript ID

VIT_18s0001g05060.t01
Transcript Infomation

cdna chromosome:12X:18:4143615:4147853:1 gene:VIT_18s0001g05060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGGGAGAAGGGTTGTCATCATATGAGTTTGCAGTTGGATTGTATTTTGGGACAACGAT
TTCTTCGATAGTTCGTTTTTGGTTTTCTTATTTTATCATATTTGTCAGTTGAGAATAGAC
AGTCTGGTGCATCTCTGCGTTTTTTCTTACCTGCCTCGATCATTTTATTCTCCGTCAACC
CACATTTGCATCCCCTCTACCACCTCGGTTTCTCCGTTGCCGGAGGATCTTCATTTGCTT
ATTTATATTTGCATAAAGTGTTGGATTTTCAGAATGGTTGCCATTGCATTTCATCAAACC
GTTGGGACCCTGCATTCTCAAGGATATCTCAATAACTCTGGTTTTCACCATGAGTTTGGG
AATGCTTCTGTGAAATTGATTCCAAGGGGTTCCAAAGTCAATGTTGGATTATTGAAAAGA
GGAAGTGGCAATTCTGGCAAGAGAAGTTTTGCTGTAATTCAAGCCTCAACTGCTCATACA
TCAGTATCCGGTCCAGTGTCATCACCGTCAAGTAACAGCACTAATGGGTCACCAAAGAAA
TCAAATGAAACTGCTTTGATCCTAATCCGACACGGTGAGTCTTTATGGAATGAAAAGAAC
CTGTTCACTGGTTGTGTTGATGTGCCCTTAACTAGGAAGGGTGTAGAAGAGGCACTTGAA
GCTGGAATGAGAATCAGCAACATTCCCATTGACATGATCTATACATCTGCTTTAATTCGC
TCACAGATGACTGCTATGCTAGCCATGACCCAGCACCGTCGCAAGAAGGTGCCAATCATT
ATGCATAATGAGAGTGAACAGGCAAAAGCATGGAGTCAAATTTACAGTGAAGACACCAAA
AGGCAATCCATACCAGTTATAGCAGCTTGGCAATTGAATGAAAGAATGTATGGAGAATTA
CAGGGTCTCAATAAGCAGGAAACTGCAGATAGATATGGAAAGGAGCAGGTTCATGAGTGG
CGTCGTAGTTATGATATACCTCCACCCAATGGCGAGAGTTTGGAAATGTGCGCTGAAAGA
GCTGTAGCTTATTTTAGAGAACATATTGAACCCCAACTTCTGTCTGGAAAGCACATAATG
ATTGCTGCCCATGGGAATTCACTGAGGTCCATCATTATGTATCTGGACAAATTAACTTCT
CAAGAGGTTATTAGCTTAGAACTATCAACAGGAATTCCCATGCTTTACATATTCAAAGAG
GGAAAATTTATCAGGAGGGGAAGTCCTATAGGACCTGCTGAAGCTGGGGTTTATGCCTAC
ACTAAGAGTTTGGCTCAATACAGGCAGAAGTTGGATGATATGTTGCATTAAGATTTTCAA
GTACAGGGCCTTCAGTGCATTGCATTCACAATCTTTCATACTATTAGTTTCATATTTAGG
AGAACAAAGTAGCAGTTGTGCAAGAGCAAGTTGCTTGAACCATACAAGGAGTTAGGCGGC
TGTGTAATGCGTCAATGTAATTTTTATATGGGTTGATCAAGGCTAGTTGAAGTACCTGCC
ATGTTTGAGGTTAGGCGTATTATAGAGATGTGAAAATCTGTAGACTGAAATGATGAATGT
TTTTTTCTTTGCATTTTGGACTCTGGATTTTCCTGGTGTAAATCTTGGATGAATTACTGT
ATGGCTTTTACTTTGAATTGAGAAAGGATTGCCAAAGACACTTTACATTCTAAACGATTC