Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g05030.t01
CDS Infomation

cds chromosome:12X:18:4130541:4134290:-1 gene:VIT_18s0001g05030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGGGCACCTCAACAACTAAACTACTGAGCATTCTATGCGCAGCCTTTTCTTGTATA
CTGTCTCTTTCTTATGGGAGAGTAAATCCCAATTTTCAAGTTAAAGCGGTAAATCTTGGA
GGTTGGCTGGTTACAGAAGGTTGGATTAAGCCATCTCTCTTTGATGACATTCCCAACAAA
GATTTCCTGGATGGAACTGAACTCCAGTTCAAGTCAGTAACAATTGGGAAGTATCTCTGC
GCAGAGACGGGAGGTGGAACAATCATAGTTGTGAATCGAACAGCGGCCTCGGGCTGGGAA
ACATTTAGATTGTGGAGGATCAATGAAACCGCTTTCCATTTTAGAGTCTTCAACAAACAG
TTCATGGGACTAGACACTGCCGGCAATGGGATCGATATAGTAGCAGTTTCAAACACCCCT
GGTGGATCCGAAACATTCCAGATCGTGAAGAACCCAAATGATTCGAAGCGGGTGCGAATC
AAAGCACCTAATGGGTTCTTCTTACAGGCGAAGACAGAGGAGCTGGTGACAGCTGATTAT
GCAGGAGACGGTGGATGGGGTGATGATGATCCCACGGTGTTTGTGATGACCGTCAATGTA
GCCTTGGAAGGCGAGTTTCAAGTCACTAACGGCTATGGCCCAGACAAAGCTCCTCAAGTC
ATGAAGGAGCACTGGAGCACATTCATTGTGGAAGATGACTTCAAGTTCATATCAGAAAAT
GGATTGAATGCAGTGAGGATTCCTGTTGGATGGTGGATAGCATGTGATCCAACACCTCCA
TCTCCTTTTGTTGGAGGGTCTTTGTACGCCCTTGACAATGCCTTCACTTGGGCTCGGAAA
TATAAGGTGAATGTTATAATTGATCTACATGCAGCACCGGGTTCTCAGAACGGTTGGGAA
CATAGTGCTTCCAGAGACGGGTCTCAGGAATGGGGGAAGACTGACCAGAACATACAAAAG
ACCGTGGCCGTTATAGAATTCTTAACTGCCAGGTACGCCAACAACCCCAGCCTTTATGCA
GTTGAGCTGATAAATGAGCCTCTATCACCGGGAGCAACTCTAGAAATGGTTACCAAGTAC
TACAGGGCCGGTTATGAAGCTGTGCGGAAGCATTCTTTGACAGCTTATGTGGTCATGTCA
AACCGATTAGGACCAGCTGATTCGAGGGAGCTCTTTCCTCTCACCAGTGGCTTAAGTAGA
GCAGTCATTGACGTCCATTACTACAACCTCTTCGAAGATATGTTTGACCACATGACTGTC
CAACAGAATATTGATTTCGTCAACACCAACAGATCAGCACAATTGGGGCGTGTAACCACT
TCCAATGGGCCTCTCACTTTTGTTGGGGAATGGGTGGTAGAATGGAAAGTTGAGGGAGCT
ACAAAGAAGGACTACCAGAGATTCGCAAAGGCTCAATTGAAGGTGTTTGGGCGGGCAACT
TTTGGGTGGGCTTACTGGACTCTGAAGAACGTGAAGAACCATTGGAGCCTAGAGTGGATG
ATCAACAATGGTTACATCAAGCTTTAG

Peptide Sequence

PEP ID

VIT_18s0001g05030.t01
PEP Infomation

pep chromosome:12X:18:4130541:4134290:-1 gene:VIT_18s0001g05030 transcript:VIT_18s0001g05030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTGTSTTKLLSILCAAFSCILSLSYGRVNPNFQVKAVNLGGWLVTEGWIKPSLFDDIPNK
DFLDGTELQFKSVTIGKYLCAETGGGTIIVVNRTAASGWETFRLWRINETAFHFRVFNKQ
FMGLDTAGNGIDIVAVSNTPGGSETFQIVKNPNDSKRVRIKAPNGFFLQAKTEELVTADY
AGDGGWGDDDPTVFVMTVNVALEGEFQVTNGYGPDKAPQVMKEHWSTFIVEDDFKFISEN
GLNAVRIPVGWWIACDPTPPSPFVGGSLYALDNAFTWARKYKVNVIIDLHAAPGSQNGWE
HSASRDGSQEWGKTDQNIQKTVAVIEFLTARYANNPSLYAVELINEPLSPGATLEMVTKY
YRAGYEAVRKHSLTAYVVMSNRLGPADSRELFPLTSGLSRAVIDVHYYNLFEDMFDHMTV
QQNIDFVNTNRSAQLGRVTTSNGPLTFVGEWVVEWKVEGATKKDYQRFAKAQLKVFGRAT
FGWAYWTLKNVKNHWSLEWMINNGYIKL

Transcript Sequence

Transcript ID

VIT_18s0001g05030.t01
Transcript Infomation

cdna chromosome:12X:18:4130541:4134290:-1 gene:VIT_18s0001g05030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCAGTAGTGAAAACCCAAAAGAAAGATCATATGACGGGCACCTCAACAACTAAACTAC
TGAGCATTCTATGCGCAGCCTTTTCTTGTATACTGTCTCTTTCTTATGGGAGAGTAAATC
CCAATTTTCAAGTTAAAGCGGTAAATCTTGGAGGTTGGCTGGTTACAGAAGGTTGGATTA
AGCCATCTCTCTTTGATGACATTCCCAACAAAGATTTCCTGGATGGAACTGAACTCCAGT
TCAAGTCAGTAACAATTGGGAAGTATCTCTGCGCAGAGACGGGAGGTGGAACAATCATAG
TTGTGAATCGAACAGCGGCCTCGGGCTGGGAAACATTTAGATTGTGGAGGATCAATGAAA
CCGCTTTCCATTTTAGAGTCTTCAACAAACAGTTCATGGGACTAGACACTGCCGGCAATG
GGATCGATATAGTAGCAGTTTCAAACACCCCTGGTGGATCCGAAACATTCCAGATCGTGA
AGAACCCAAATGATTCGAAGCGGGTGCGAATCAAAGCACCTAATGGGTTCTTCTTACAGG
CGAAGACAGAGGAGCTGGTGACAGCTGATTATGCAGGAGACGGTGGATGGGGTGATGATG
ATCCCACGGTGTTTGTGATGACCGTCAATGTAGCCTTGGAAGGCGAGTTTCAAGTCACTA
ACGGCTATGGCCCAGACAAAGCTCCTCAAGTCATGAAGGAGCACTGGAGCACATTCATTG
TGGAAGATGACTTCAAGTTCATATCAGAAAATGGATTGAATGCAGTGAGGATTCCTGTTG
GATGGTGGATAGCATGTGATCCAACACCTCCATCTCCTTTTGTTGGAGGGTCTTTGTACG
CCCTTGACAATGCCTTCACTTGGGCTCGGAAATATAAGGTGAATGTTATAATTGATCTAC
ATGCAGCACCGGGTTCTCAGAACGGTTGGGAACATAGTGCTTCCAGAGACGGGTCTCAGG
AATGGGGGAAGACTGACCAGAACATACAAAAGACCGTGGCCGTTATAGAATTCTTAACTG
CCAGGTACGCCAACAACCCCAGCCTTTATGCAGTTGAGCTGATAAATGAGCCTCTATCAC
CGGGAGCAACTCTAGAAATGGTTACCAAGTACTACAGGGCCGGTTATGAAGCTGTGCGGA
AGCATTCTTTGACAGCTTATGTGGTCATGTCAAACCGATTAGGACCAGCTGATTCGAGGG
AGCTCTTTCCTCTCACCAGTGGCTTAAGTAGAGCAGTCATTGACGTCCATTACTACAACC
TCTTCGAAGATATGTTTGACCACATGACTGTCCAACAGAATATTGATTTCGTCAACACCA
ACAGATCAGCACAATTGGGGCGTGTAACCACTTCCAATGGGCCTCTCACTTTTGTTGGGG
AATGGGTGGTAGAATGGAAAGTTGAGGGAGCTACAAAGAAGGACTACCAGAGATTCGCAA
AGGCTCAATTGAAGGTGTTTGGGCGGGCAACTTTTGGGTGGGCTTACTGGACTCTGAAGA
ACGTGAAGAACCATTGGAGCCTAGAGTGGATGATCAACAATGGTTACATCAAGCTTTAGA
CTTCAACACCATTATCAATTTACATTTGCAGTTTTTGTGTTATTACCATTGGAAAGAAGA
AAAGGGCATATCTGCAACATGCTCAAGGACAATTAATGGAGTATGGACTACTAAACACTG
TGACAGACTCATGAATATAAAATAATGGTCTCCATTAATTTTCAAATA