Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04970.t01
CDS Infomation

cds chromosome:12X:18:4087210:4096302:1 gene:VIT_18s0001g04970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCATCTTCCAGCAATCCGGCATCTCATCAGTCATCTCCACATGTCTCCAAGGCTC
TCCTCATCATCACCAACCACAAGATCCTCTTTACAACCGCTCTTTTCCATCCCTACTTTT
CAAAAACTATATTCCTTCTTCCCTCCCTCTCTTAAACCCTACCACACTCACTCCAAAACC
CTAGTACCCCATCTCCACCTCACCCCCAATGATACTACGCTGGTTCTGAAGAAAGATGAG
CGGTTGGGGTCGCGTTCCGTTAATCAGGAGCATATTGAGGGCACTAGCACGACCACAATT
GCAGCCATTGTGACTTCATTGGGGGGTCCTCCTAGTGCCGTGGGAATTGTCCGGTTATCG
GGACCAGAAGCAGTGGCCATCGTTGCCCGTGTATTCCGTCCCGCTCGGAGGAACAAAGGC
AAGACTTTGGGTTCGGGTTCGGGTTCGTGGCGGCCCACCAGTCATGTGGTGGAGTACGGT
GTCGTTTTGGACCACCACGGGAATGTGGTGGACGAGGTTCTAGCCATACCAATGTTGGCC
CCAAGATCCTACACTCGTGAAGATGTGGTTGAGCTTCAGTGTCATGGCAGTGAAGTGTGT
TTACGCCGTGTGTTGAGAGCTTGCTTGGAATCTGGGGCAAGGCTTGCAGAACCAGGCGAG
TTCACCCTTCGTGCTTTTCTTAATGGTCGATTAGATCTCTCCCAAGCTGAAAATGTGGGA
AAACTAATTTCAGCCAAGTCCATTGCTGCTGCAGATGCAGCACTTGCAGGAATTCAGGGA
GGTTTCTCATCTTTGGTTAGATCACTTAGAATACAGTGCATCGAGTTGCTTACTGAAATT
GAAGCTCGATTAGATTTTGATGACGAGATGCCACCATTGGACTTGAATCTCATTATGGAT
AAAATACATTCCATGTCACAAGATGTGGAGAATGCATTGGAGACTGCCAATTATGACCAG
CTACTGCAATCTGGACTACAGATAGCAATTATTGGTCGTCCAAATGTTGGGAAGTCCAGC
CTTCTTAATGCATGGAGCAAAAGTGAGAGAGCAATAGTTACAGAGATAGCTGGAACCACA
CGGGATGTGGTGGAAGCCAGTGTTTCCATTCATGGCATCCCTGTCACCCTCCTTGATACA
GCAGGTATTAGGGAAACAGATGACATTGTGGAGAAGATTGGTGTAGAGAGATCCGAAGCA
GTTGCTATCAGTGCAGATGTCATTATCATGACGATAAGTGCATTAGACGGGTGGACATCA
CAAGATACCAAACTTTTTAACAGGATTATATCCAATAAGAAATTCGTTGAATCTTCTACT
CCAGTGATCCTTGTAGTCAACAAAATAGATTGTGCTCCATCTGCATGCACCGAATTGTTT
ATGGAGGGAAACTCTTTCAGTAAGCACATTTTCACTTGTGCAGTCACCGGCCAAGGAATA
TCAGACTTGGAGTCAGCAATAATAGAGATTGTTGGTCTCAACAAGATTCCTGCAGGGGGG
CGCAGATGGACTGTAAACCAGAGACAATGTGAACAACTTGTTCGGACCAAGGAAGCTCTT
GCAAGGTTGATATCCTCTATAGAGGAGGAAATGCCTCTTGACTTCTGGACAATTGATTTG
AGGGAAGCCGCATTGGCCCTTGGCCAGATAAGTGGAGAAGATATCTCTGAAGAAGTTTTG
ACCAACATCTTTGGCAAGTTCTGTATTGGTAAGTAG

Peptide Sequence

PEP ID

VIT_18s0001g04970.t01
PEP Infomation

pep chromosome:12X:18:4087210:4096302:1 gene:VIT_18s0001g04970 transcript:VIT_18s0001g04970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGHLPAIRHLISHLHMSPRLSSSSPTTRSSLQPLFSIPTFQKLYSFFPPSLKPYHTHSKT
LVPHLHLTPNDTTLVLKKDERLGSRSVNQEHIEGTSTTTIAAIVTSLGGPPSAVGIVRLS
GPEAVAIVARVFRPARRNKGKTLGSGSGSWRPTSHVVEYGVVLDHHGNVVDEVLAIPMLA
PRSYTREDVVELQCHGSEVCLRRVLRACLESGARLAEPGEFTLRAFLNGRLDLSQAENVG
KLISAKSIAAADAALAGIQGGFSSLVRSLRIQCIELLTEIEARLDFDDEMPPLDLNLIMD
KIHSMSQDVENALETANYDQLLQSGLQIAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTT
RDVVEASVSIHGIPVTLLDTAGIRETDDIVEKIGVERSEAVAISADVIIMTISALDGWTS
QDTKLFNRIISNKKFVESSTPVILVVNKIDCAPSACTELFMEGNSFSKHIFTCAVTGQGI
SDLESAIIEIVGLNKIPAGGRRWTVNQRQCEQLVRTKEALARLISSIEEEMPLDFWTIDL
REAALALGQISGEDISEEVLTNIFGKFCIGK

Transcript Sequence

Transcript ID

VIT_18s0001g04970.t01
Transcript Infomation

cdna chromosome:12X:18:4087210:4096302:1 gene:VIT_18s0001g04970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTAAGGCAAAAATGGGGCATCTTCCAGCAATCCGGCATCTCATCAGTCATCTCCACAT
GTCTCCAAGGCTCTCCTCATCATCACCAACCACAAGATCCTCTTTACAACCGCTCTTTTC
CATCCCTACTTTTCAAAAACTATATTCCTTCTTCCCTCCCTCTCTTAAACCCTACCACAC
TCACTCCAAAACCCTAGTACCCCATCTCCACCTCACCCCCAATGATACTACGCTGGTTCT
GAAGAAAGATGAGCGGTTGGGGTCGCGTTCCGTTAATCAGGAGCATATTGAGGGCACTAG
CACGACCACAATTGCAGCCATTGTGACTTCATTGGGGGGTCCTCCTAGTGCCGTGGGAAT
TGTCCGGTTATCGGGACCAGAAGCAGTGGCCATCGTTGCCCGTGTATTCCGTCCCGCTCG
GAGGAACAAAGGCAAGACTTTGGGTTCGGGTTCGGGTTCGTGGCGGCCCACCAGTCATGT
GGTGGAGTACGGTGTCGTTTTGGACCACCACGGGAATGTGGTGGACGAGGTTCTAGCCAT
ACCAATGTTGGCCCCAAGATCCTACACTCGTGAAGATGTGGTTGAGCTTCAGTGTCATGG
CAGTGAAGTGTGTTTACGCCGTGTGTTGAGAGCTTGCTTGGAATCTGGGGCAAGGCTTGC
AGAACCAGGCGAGTTCACCCTTCGTGCTTTTCTTAATGGTCGATTAGATCTCTCCCAAGC
TGAAAATGTGGGAAAACTAATTTCAGCCAAGTCCATTGCTGCTGCAGATGCAGCACTTGC
AGGAATTCAGGGAGGTTTCTCATCTTTGGTTAGATCACTTAGAATACAGTGCATCGAGTT
GCTTACTGAAATTGAAGCTCGATTAGATTTTGATGACGAGATGCCACCATTGGACTTGAA
TCTCATTATGGATAAAATACATTCCATGTCACAAGATGTGGAGAATGCATTGGAGACTGC
CAATTATGACCAGCTACTGCAATCTGGACTACAGATAGCAATTATTGGTCGTCCAAATGT
TGGGAAGTCCAGCCTTCTTAATGCATGGAGCAAAAGTGAGAGAGCAATAGTTACAGAGAT
AGCTGGAACCACACGGGATGTGGTGGAAGCCAGTGTTTCCATTCATGGCATCCCTGTCAC
CCTCCTTGATACAGCAGGTATTAGGGAAACAGATGACATTGTGGAGAAGATTGGTGTAGA
GAGATCCGAAGCAGTTGCTATCAGTGCAGATGTCATTATCATGACGATAAGTGCATTAGA
CGGGTGGACATCACAAGATACCAAACTTTTTAACAGGATTATATCCAATAAGAAATTCGT
TGAATCTTCTACTCCAGTGATCCTTGTAGTCAACAAAATAGATTGTGCTCCATCTGCATG
CACCGAATTGTTTATGGAGGGAAACTCTTTCAGTAAGCACATTTTCACTTGTGCAGTCAC
CGGCCAAGGAATATCAGACTTGGAGTCAGCAATAATAGAGATTGTTGGTCTCAACAAGAT
TCCTGCAGGGGGGCGCAGATGGACTGTAAACCAGAGACAATGTGAACAACTTGTTCGGAC
CAAGGAAGCTCTTGCAAGGTTGATATCCTCTATAGAGGAGGAAATGCCTCTTGACTTCTG
GACAATTGATTTGAGGGAAGCCGCATTGGCCCTTGGCCAGATAAGTGGAGAAGATATCTC
TGAAGAAGTTTTGACCAACATCTTTGGCAAGTTCTGTATTGGTAAGTAGACATTGATTGA
CAATTTGTGCACGACACTTAGTCAATTATTTTATATAAATTGCAAGATCCTGTCTGTATA
TTACTTTCGAGGGTTGATTTTGGCAGTATGACTTTCTC