Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04870.t01
CDS Infomation

cds chromosome:12X:18_random:4039550:4041786:1 gene:VIT_18s0001g04870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGGGTCAAGTCTTAGCAAGCCCTCTAGGCCAATTTCCTGATCTGGAAAATCGTCCA
GTGGTCAAGTATCACCCTAACATTTGGGGTGACCAGTTCTTATCCCACACTCCCGAAGAC
GAGGTAACACGTGCCTGCAAAGAGAAGCAGCTTGAAGATCTGAAAGAGGAAATTCGAAGG
AAGCTAATGAATACAGCTGGTAACACTTCCCAACAACTAAAATTTATCGATGCTGTGCAA
CGTCTTGGGCTGGCATACCACTTTGAAAGAGAGATAGAAGAAGTGTTACAACATATTTAT
GATAGCTATCCTAATGGTGATGATATGGAAGGTGATATCTATAATGTTGCTCTTCAATTT
CGGTTACTAAGACAAGCTGGGTTCAATATTTCATGTGGCTTGTTCAATGAGTTCAAGGAT
GAAAAGGGTAACTTCAAGAAAGCTTTGATCAGTGATGTAAGAGGCATGCTAGGCTTGTAT
GAGGCTGCACATCTCAGAGTTCGTGGAGAAGACATACTGGATGAAGCACTTGCTTTCACC
ACCACCCATCTTAGGTCCATGGTAGAACATTTAGAATATCCTTTTGCAGAACAAGTTGTT
CATGCCTTGAAGCAGCCCATTAGAAGAGGTTTAGAGAGGCTAGAGGCAAGGTGGTATATA
TCTATCTACCAGGATGAAACTTCGCATGACAGAACTCTACTAAAGCTGGCCAAGTTAGAT
TTCAATCTAGTGCAGTCCCTACACAAGGAGGAGCTAAGCAATATTTCTAGGTGGTGGAAA
AAATTAGACTTTGCTACAAAGCTACCTTTTGCGCGAGATAGATTGGTGGAATGCTACTTC
TGGATACTTGGGTTTTACTTTGAGCCTCAATATGTCTGGGCTAGACGAATTCTAACCAAA
ACAATTGCCTTGACATCCACTATGGATGATATATATGACGCATATGGCACATTTGAAGAA
CTCAAGCTCTTCACCGCGGCCATTGAGAGGTGGGATATTAACAGCATAGATCACCTTCCA
GAATACATGAAACACTTTTATGTGGCACTCTTAGATGTGTACAAAGAAATTGAGGAAGAG
ATGGAGAAAGAAGGAAACCAATATCGGGTTCAATATGCCATAGAAGCAATGAAAAACCAA
GCTAGAGCTTATTTTCATGAGGCTAAATGGCTCCATGAAGGACGCATACCAACAGTGGAA
GAGTATATGAGTGTAGCACAGGTAAGCTCAGGTGACTCCATGCTTACAATCACGTCTTTC
ATTGGTATGGGAAAAATCGTAACAAAGGAGGCCTTTGATTGGGTGATCACTAACCCCAAG
ATTGTCACTGCATCATCTGTAATTTCTAGGCTTATGGATGACATCACTTCACATAAGTTT
GAGCAAAAGAGAGGACATGTTGCCTCAGGCGTTGAATGTTACATGAAGCAATACGGTGCC
TCTGAGGAAGAGGTATACGATAAGTTTCAGAAGCAAGTTGAGGATGCATGCAAGGATATT
AATGAGGAGTTCCTACGACCTACGGCTGTTCCGATGCCTCTCCTTATGCGTGTGCTTAAT
CTTTCTCGAGTGATGTATGTGATCTACACGGGGGGAGATGGGTACACTCATGTTGGAAAA
GTGATGAAGAATAATGTTGCATCACTGCTCATTCACCCTATCGCATGA

Peptide Sequence

PEP ID

VIT_18s0001g04870.t01
PEP Infomation

pep chromosome:12X:18_random:4039550:4041786:1 gene:VIT_18s0001g04870 transcript:VIT_18s0001g04870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGQVLASPLGQFPDLENRPVVKYHPNIWGDQFLSHTPEDEVTRACKEKQLEDLKEEIRR
KLMNTAGNTSQQLKFIDAVQRLGLAYHFEREIEEVLQHIYDSYPNGDDMEGDIYNVALQF
RLLRQAGFNISCGLFNEFKDEKGNFKKALISDVRGMLGLYEAAHLRVRGEDILDEALAFT
TTHLRSMVEHLEYPFAEQVVHALKQPIRRGLERLEARWYISIYQDETSHDRTLLKLAKLD
FNLVQSLHKEELSNISRWWKKLDFATKLPFARDRLVECYFWILGFYFEPQYVWARRILTK
TIALTSTMDDIYDAYGTFEELKLFTAAIERWDINSIDHLPEYMKHFYVALLDVYKEIEEE
MEKEGNQYRVQYAIEAMKNQARAYFHEAKWLHEGRIPTVEEYMSVAQVSSGDSMLTITSF
IGMGKIVTKEAFDWVITNPKIVTASSVISRLMDDITSHKFEQKRGHVASGVECYMKQYGA
SEEEVYDKFQKQVEDACKDINEEFLRPTAVPMPLLMRVLNLSRVMYVIYTGGDGYTHVGK
VMKNNVASLLIHPIA

Transcript Sequence

Transcript ID

VIT_18s0001g04870.t01
Transcript Infomation

cdna chromosome:12X:18_random:4039550:4041786:1 gene:VIT_18s0001g04870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGTCAGTTTTCAAAGAAGTGTTCTACTACCATTCCAAAAAATTAACATGTCGGGTCAAG
TCTTAGCAAGCCCTCTAGGCCAATTTCCTGATCTGGAAAATCGTCCAGTGGTCAAGTATC
ACCCTAACATTTGGGGTGACCAGTTCTTATCCCACACTCCCGAAGACGAGGTAACACGTG
CCTGCAAAGAGAAGCAGCTTGAAGATCTGAAAGAGGAAATTCGAAGGAAGCTAATGAATA
CAGCTGGTAACACTTCCCAACAACTAAAATTTATCGATGCTGTGCAACGTCTTGGGCTGG
CATACCACTTTGAAAGAGAGATAGAAGAAGTGTTACAACATATTTATGATAGCTATCCTA
ATGGTGATGATATGGAAGGTGATATCTATAATGTTGCTCTTCAATTTCGGTTACTAAGAC
AAGCTGGGTTCAATATTTCATGTGGCTTGTTCAATGAGTTCAAGGATGAAAAGGGTAACT
TCAAGAAAGCTTTGATCAGTGATGTAAGAGGCATGCTAGGCTTGTATGAGGCTGCACATC
TCAGAGTTCGTGGAGAAGACATACTGGATGAAGCACTTGCTTTCACCACCACCCATCTTA
GGTCCATGGTAGAACATTTAGAATATCCTTTTGCAGAACAAGTTGTTCATGCCTTGAAGC
AGCCCATTAGAAGAGGTTTAGAGAGGCTAGAGGCAAGGTGGTATATATCTATCTACCAGG
ATGAAACTTCGCATGACAGAACTCTACTAAAGCTGGCCAAGTTAGATTTCAATCTAGTGC
AGTCCCTACACAAGGAGGAGCTAAGCAATATTTCTAGGTGGTGGAAAAAATTAGACTTTG
CTACAAAGCTACCTTTTGCGCGAGATAGATTGGTGGAATGCTACTTCTGGATACTTGGGT
TTTACTTTGAGCCTCAATATGTCTGGGCTAGACGAATTCTAACCAAAACAATTGCCTTGA
CATCCACTATGGATGATATATATGACGCATATGGCACATTTGAAGAACTCAAGCTCTTCA
CCGCGGCCATTGAGAGGTGGGATATTAACAGCATAGATCACCTTCCAGAATACATGAAAC
ACTTTTATGTGGCACTCTTAGATGTGTACAAAGAAATTGAGGAAGAGATGGAGAAAGAAG
GAAACCAATATCGGGTTCAATATGCCATAGAAGCAATGAAAAACCAAGCTAGAGCTTATT
TTCATGAGGCTAAATGGCTCCATGAAGGACGCATACCAACAGTGGAAGAGTATATGAGTG
TAGCACAGGTAAGCTCAGGTGACTCCATGCTTACAATCACGTCTTTCATTGGTATGGGAA
AAATCGTAACAAAGGAGGCCTTTGATTGGGTGATCACTAACCCCAAGATTGTCACTGCAT
CATCTGTAATTTCTAGGCTTATGGATGACATCACTTCACATAAGTTTGAGCAAAAGAGAG
GACATGTTGCCTCAGGCGTTGAATGTTACATGAAGCAATACGGTGCCTCTGAGGAAGAGG
TATACGATAAGTTTCAGAAGCAAGTTGAGGATGCATGCAAGGATATTAATGAGGAGTTCC
TACGACCTACGGCTGTTCCGATGCCTCTCCTTATGCGTGTGCTTAATCTTTCTCGAGTGA
TGTATGTGATCTACACGGGGGGAGATGGGTACACTCATGTTGGAAAAGTGATGAAGAATA
ATGTTGCATCACTGCTCATTCACCCTATCGCATGA