Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04790.t01
CDS Infomation

cds chromosome:12X:18:3994178:4000375:1 gene:VIT_18s0001g04790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTACCTCCTCGTCGTCGATGCTGCCATTGCTGTCACATTTTCGTCAAAGCTCATT
CATCGCTTCTCCGACGAGGCCAAGGCGTTTTTCGTTTCCAGGAACGGCAATATCTTTGCT
GATTCGTGGCCGAAGAAGAGGAGCTTTGATTACTACAGGTTGCTTCTGAGTAGCGACTTG
AAGCGCCAGAAGTTGAAGCTGGGAGCGGAATATCAGCTCTTGTTTCCATCTGAAGGAAGC
GACGCTCTGTTCTTGGGTAATGAATTTGGCTGGTTACATTACACTTGGATTGATATAGGA
ACACCGAATGTCTCTTTTCTTGTTGCATTGGATGCTGGGAGCGATTTGCTTTGGGTTCCT
TGTGATTGTATGCAATGTGCTCCCTTGTCTGCCAGCTACTATGATAGATTGGGTAGAGAT
CTGAATGAGTATAGCCCATCTTTATCAAGCACCAGCAAGCCCCTATCTTGCAATGATCAA
TTATGTGAACTGGGTTCAGACTGCAAAAGTTCAAAGGACCCTTGCCCTTACCTTGCTAGC
TACTATTCAGAGAATACCTCAAGTTCTGGTTTGCTGATCGAGGACCGACTACATTTGGCA
CCATTCAGTGAACATGCATCCCGAAGTTCGGTGTGGGCTTCAGTCATTATAGGCTGTGGT
AGGAAACAAAGTGGTGCTTTTTCAGATGGAGCGGCTCCTGATGGTCTTATGGGATTGGGA
CCTGGGGACCTTTCAGTTCCTAGTTTGCTAGCAAAAGCAGGATTGGTTCGAAATACTTTC
TCAATTTGTTTTGACGATAATCATTCTGGGACAATTTTGTTTGGTGACCAAGGACTTGTG
ACCCAAAAATCTACATCATTTGTGCCTTTAGAAGGAAAATTTGTTACCTATCTTATTGAG
GTGGAGGGTTACCTCGTTGGGAGTTCTTCTCTTAAGACAGCAGGATTTCAAGCTCTGGTT
GACAGTGGAACATCATTCACATTTCTTCCATATGAAATTTATGAAAAAATTGTTGTGGAG
TTTGACAAACAAGTGAATGCTACAAGGTCCAGCTTCAAAGGGTCCCCCTGGAAGTACTGT
TATAATTCTAGTTCACAGGAATTGCTCAACATTCCTACTGTGACACTTGTGTTTGCTATG
AACCAAAGTTTTATAGTACATAATCCTGTTATTAAGTTAATCTCGGAGAATGAGGAATTC
AATGTTTTCTGTTTACCTATCCAGCCTATACATGAAGAATTTGGCATCATTGGCCAAAAC
TTCATGTGGGGTTATCGCATGGTGTTCGATAGGGAAAATTTGAAGCTGGGTTGGTCTACT
TCCAATTGTCAAGATATAACCGATGGTAAAATAATGCATTTAACACCACCTCCAAATGAT
AGATCTCCAAACCCACTGCCAACCAATCAGCAACAGATGACCCCTAGTAGGCATGCTGTT
GCTCCTGCTGTTGCTGGAAGGACTCCCGCAAAATCTGCTGCAGTGTCACCTCTTGCTTTT
CCCTACTGGCTCTGTTTGATGAATTTGCTGCTAGTGTTGATGCGTTTGTTTGTTCTAGAT
GTCTAA

Peptide Sequence

PEP ID

VIT_18s0001g04790.t01
PEP Infomation

pep chromosome:12X:18:3994178:4000375:1 gene:VIT_18s0001g04790 transcript:VIT_18s0001g04790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAYLLVVDAAIAVTFSSKLIHRFSDEAKAFFVSRNGNIFADSWPKKRSFDYYRLLLSSDL
KRQKLKLGAEYQLLFPSEGSDALFLGNEFGWLHYTWIDIGTPNVSFLVALDAGSDLLWVP
CDCMQCAPLSASYYDRLGRDLNEYSPSLSSTSKPLSCNDQLCELGSDCKSSKDPCPYLAS
YYSENTSSSGLLIEDRLHLAPFSEHASRSSVWASVIIGCGRKQSGAFSDGAAPDGLMGLG
PGDLSVPSLLAKAGLVRNTFSICFDDNHSGTILFGDQGLVTQKSTSFVPLEGKFVTYLIE
VEGYLVGSSSLKTAGFQALVDSGTSFTFLPYEIYEKIVVEFDKQVNATRSSFKGSPWKYC
YNSSSQELLNIPTVTLVFAMNQSFIVHNPVIKLISENEEFNVFCLPIQPIHEEFGIIGQN
FMWGYRMVFDRENLKLGWSTSNCQDITDGKIMHLTPPPNDRSPNPLPTNQQQMTPSRHAV
APAVAGRTPAKSAAVSPLAFPYWLCLMNLLLVLMRLFVLDV

Transcript Sequence

Transcript ID

VIT_18s0001g04790.t01
Transcript Infomation

cdna chromosome:12X:18:3994178:4000375:1 gene:VIT_18s0001g04790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGTCACACTGCTCTGCTACTCGCACACCAGCTCCCTTTCTTTGTCTTTTGGAGTTCTT
TCTCATGGCGATTCGATCCTTGATTCCTCTCTTAATGGCGTACCTCCTCGTCGTCGATGC
TGCCATTGCTGTCACATTTTCGTCAAAGCTCATTCATCGCTTCTCCGACGAGGCCAAGGC
GTTTTTCGTTTCCAGGAACGGCAATATCTTTGCTGATTCGTGGCCGAAGAAGAGGAGCTT
TGATTACTACAGGTTGCTTCTGAGTAGCGACTTGAAGCGCCAGAAGTTGAAGCTGGGAGC
GGAATATCAGCTCTTGTTTCCATCTGAAGGAAGCGACGCTCTGTTCTTGGGTAATGAATT
TGGCTGGTTACATTACACTTGGATTGATATAGGAACACCGAATGTCTCTTTTCTTGTTGC
ATTGGATGCTGGGAGCGATTTGCTTTGGGTTCCTTGTGATTGTATGCAATGTGCTCCCTT
GTCTGCCAGCTACTATGATAGATTGGGTAGAGATCTGAATGAGTATAGCCCATCTTTATC
AAGCACCAGCAAGCCCCTATCTTGCAATGATCAATTATGTGAACTGGGTTCAGACTGCAA
AAGTTCAAAGGACCCTTGCCCTTACCTTGCTAGCTACTATTCAGAGAATACCTCAAGTTC
TGGTTTGCTGATCGAGGACCGACTACATTTGGCACCATTCAGTGAACATGCATCCCGAAG
TTCGGTGTGGGCTTCAGTCATTATAGGCTGTGGTAGGAAACAAAGTGGTGCTTTTTCAGA
TGGAGCGGCTCCTGATGGTCTTATGGGATTGGGACCTGGGGACCTTTCAGTTCCTAGTTT
GCTAGCAAAAGCAGGATTGGTTCGAAATACTTTCTCAATTTGTTTTGACGATAATCATTC
TGGGACAATTTTGTTTGGTGACCAAGGACTTGTGACCCAAAAATCTACATCATTTGTGCC
TTTAGAAGGAAAATTTGTTACCTATCTTATTGAGGTGGAGGGTTACCTCGTTGGGAGTTC
TTCTCTTAAGACAGCAGGATTTCAAGCTCTGGTTGACAGTGGAACATCATTCACATTTCT
TCCATATGAAATTTATGAAAAAATTGTTGTGGAGTTTGACAAACAAGTGAATGCTACAAG
GTCCAGCTTCAAAGGGTCCCCCTGGAAGTACTGTTATAATTCTAGTTCACAGGAATTGCT
CAACATTCCTACTGTGACACTTGTGTTTGCTATGAACCAAAGTTTTATAGTACATAATCC
TGTTATTAAGTTAATCTCGGAGAATGAGGAATTCAATGTTTTCTGTTTACCTATCCAGCC
TATACATGAAGAATTTGGCATCATTGGCCAAAACTTCATGTGGGGTTATCGCATGGTGTT
CGATAGGGAAAATTTGAAGCTGGGTTGGTCTACTTCCAATTGTCAAGATATAACCGATGG
TAAAATAATGCATTTAACACCACCTCCAAATGATAGATCTCCAAACCCACTGCCAACCAA
TCAGCAACAGATGACCCCTAGTAGGCATGCTGTTGCTCCTGCTGTTGCTGGAAGGACTCC
CGCAAAATCTGCTGCAGTGTCACCTCTTGCTTTTCCCTACTGGCTCTGTTTGATGAATTT
GCTGCTAGTGTTGATGCGTTTGTTTGTTCTAGATGTCTAATA