Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04610.t01
CDS Infomation

cds chromosome:12X:18:3918203:3923636:-1 gene:VIT_18s0001g04610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTCTTCAATGCTGCAAGATTAAAGAAATGCTTTTGTCAATCTTTTGGAGCCTTTACC
CTACCCATTACTTTTACTGATACTACCTGTTATCCAGGAATTTTCAAAACCAGGAGAGAA
GGTAAAGTAGATATGGCCTCAAGTTTGTGCACTCTTGTATCTGATGGAGAATCACATACC
CAGCCTTCTCTAATAGTCAGCCAGGACCAGATATGTCCAGTCTCAAATGTTCAATCCACT
CCAGAAATTGAAAAGAAATATGTCCACCATGTTTATGATGCAATTGCTCCACATTTCAGT
TCTACCCGCTTTGCCAAGTGGCCAAAAGTTGCCACCTTTTTGAAATCCCTGCCTTCTGGA
TCTCTTGTCTTGGATGCAGGATGTGGAAATGGGAAGTATTTGGGTTTAAGTCCAGATTGC
TTTTTTATAGGATGTGATATAAGTGCTCCTCTTATCAATATATGTGCTGATAGGGATCAT
GAAGTTGTGGTTGCTGATGCTGTAAATCTTCCTTATAGAACTGGTTTTGGTGATGCAGCA
ATCTCTATCGCTGTGTTACATCACCTAAGTACAGAGAGTAGGAGAAAGAAGGCAATCCAA
GAATTAGTCAGAGTTGTTAAAAAGGGTGGGTTAGTTCTAATAACGGTTTGGGCTGTGGAG
CAAGAGGATAGATCATTGGTTACCAAATGGACTCCTCTTTCTCCGAAGTATGTGGAGGAG
TGGATAGGACCAAGTAGTCCCCGCATTCGTAGTCCTTCATCCTTCACTCTGGAAAGTATC
CCTGAAACAGAAGAGAATGGTTCAGGAGAGCACTTAAAAGATTTGAAGGAGATTTCCAAT
GAGAACTTGCAGGATACTATGCATTCAACCTGTCAAACTGAAGATGATTCAATGACTTTT
AAAATTAAAAAAAATATTGAGAGCCATCAGGAATATTTTGTCCCTTGGCACCTACCTTAC
CATCGTGCAGAAGTCAGTGGTGCTTCTGCTTGTGCTCTTGCAAATGGCCTGGCAAAGAAA
GATGATAAAAAGGGTGCCGTAGTTTACAATAGATATTACCACGTGTTCAGTGAAGGCGAA
CTTGAAAGGTTGGTATCTGGTATGGACAATGCAGTCATTGTTGACCAATTTTTTGACAAA
TCAAATTGGTGTATTATCCTTGAGAAAACATTATGA

Peptide Sequence

PEP ID

VIT_18s0001g04610.t01
PEP Infomation

pep chromosome:12X:18:3918203:3923636:-1 gene:VIT_18s0001g04610 transcript:VIT_18s0001g04610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVFNAARLKKCFCQSFGAFTLPITFTDTTCYPGIFKTRREGKVDMASSLCTLVSDGESHT
QPSLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVATFLKSLPSG
SLVLDAGCGNGKYLGLSPDCFFIGCDISAPLINICADRDHEVVVADAVNLPYRTGFGDAA
ISIAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVWAVEQEDRSLVTKWTPLSPKYVEE
WIGPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKEISNENLQDTMHSTCQTEDDSMTF
KIKKNIESHQEYFVPWHLPYHRAEVSGASACALANGLAKKDDKKGAVVYNRYYHVFSEGE
LERLVSGMDNAVIVDQFFDKSNWCIILEKTL

Transcript Sequence

Transcript ID

VIT_18s0001g04610.t01
Transcript Infomation

cdna chromosome:12X:18:3918203:3923636:-1 gene:VIT_18s0001g04610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAAGGATGCCAACACACTAGGTCTTCCCCGGAACAAAATTGAAAAGTCTCTGTCAAAACC
CTAGTTTGCATCCCTGAGCCACCCTCGACTGCTGAATCCGCTTGTTCATTGAATCAGGTG
ATGTCTGATTAGGTCATATGGTTCAACCTGATGGTCTTCAATGCTGCAAGATTAAAGAAA
TGCTTTTGTCAATCTTTTGGAGCCTTTACCCTACCCATTACTTTTACTGATACTACCTGT
TATCCAGGAATTTTCAAAACCAGGAGAGAAGGTAAAGTAGATATGGCCTCAAGTTTGTGC
ACTCTTGTATCTGATGGAGAATCACATACCCAGCCTTCTCTAATAGTCAGCCAGGACCAG
ATATGTCCAGTCTCAAATGTTCAATCCACTCCAGAAATTGAAAAGAAATATGTCCACCAT
GTTTATGATGCAATTGCTCCACATTTCAGTTCTACCCGCTTTGCCAAGTGGCCAAAAGTT
GCCACCTTTTTGAAATCCCTGCCTTCTGGATCTCTTGTCTTGGATGCAGGATGTGGAAAT
GGGAAGTATTTGGGTTTAAGTCCAGATTGCTTTTTTATAGGATGTGATATAAGTGCTCCT
CTTATCAATATATGTGCTGATAGGGATCATGAAGTTGTGGTTGCTGATGCTGTAAATCTT
CCTTATAGAACTGGTTTTGGTGATGCAGCAATCTCTATCGCTGTGTTACATCACCTAAGT
ACAGAGAGTAGGAGAAAGAAGGCAATCCAAGAATTAGTCAGAGTTGTTAAAAAGGGTGGG
TTAGTTCTAATAACGGTTTGGGCTGTGGAGCAAGAGGATAGATCATTGGTTACCAAATGG
ACTCCTCTTTCTCCGAAGTATGTGGAGGAGTGGATAGGACCAAGTAGTCCCCGCATTCGT
AGTCCTTCATCCTTCACTCTGGAAAGTATCCCTGAAACAGAAGAGAATGGTTCAGGAGAG
CACTTAAAAGATTTGAAGGAGATTTCCAATGAGAACTTGCAGGATACTATGCATTCAACC
TGTCAAACTGAAGATGATTCAATGACTTTTAAAATTAAAAAAAATATTGAGAGCCATCAG
GAATATTTTGTCCCTTGGCACCTACCTTACCATCGTGCAGAAGTCAGTGGTGCTTCTGCT
TGTGCTCTTGCAAATGGCCTGGCAAAGAAAGATGATAAAAAGGGTGCCGTAGTTTACAAT
AGATATTACCACGTGTTCAGTGAAGGCGAACTTGAAAGGTTGGTATCTGGTATGGACAAT
GCAGTCATTGTTGACCAATTTTTTGACAAATCAAATTGGTGTATTATCCTTGAGAAAACA
TTATGACAAACCAAATTTGTGGTACATCAACCAATCTGAGTGTAATTCATACAGAAGATG
GTGATGATCCAGTTGATAGTTGCAGGCACTGCAAAATCTTCACTTTCAGAAGTAGCTTCC
CATAGGAAGCCCACATGTTTCAGTAACACAGGTGAGGATGCTGAATGCCTTGTTTCCAAA
GTTTGTGAGAGGGTCTTCACCTTTATTGTTTCCTGATTTAGCGGGGTTTGCTTCTAGGTA
CAGTTGCCTTGTGCCTCAACCTTTAAACAGTCAGCCCCCCAACTCCACCTAAAAAGGCAA
GCACACTGAGACACAATTAGATATGATTCTACTTGTTCCCAATGTATCATGCATTGGTCC
TACAGGTCAAAGGTCACTGAATATAGGTATTTCTTAGCCAGGGGCTTTATTTGCATTTGT
GTGATCGATGTTGGAGTCAAAACTGTTCTATGCCATTTGATCGATTTTGTCAACTTGTTT
ATTGTCCAATAAAGATCCAACAGACTAGGGCTGTTTCATTCTCC