Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04600.t01
CDS Infomation

cds chromosome:12X:18:3913481:3917327:1 gene:VIT_18s0001g04600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCTAGCAGGAGTATGTCTACCCGTCCTTTGGATCTTGACACAGAAACACAAGGT
TCTGCTTGGCCTGAGAAGGCTGTAGCACTTAAAAACTTTGTCAAGGAGAAAGGTACAGTT
GCAGTCTCTAGTGTTTTGCGTGTCCTTTCGGGGAAAACAGAGGAGGATGTACATGCTGCT
CAGGATGATGAAGATAAGAATAAAACTGGTGTTAAGGAGGTTGTAGATTCCCCCAAAGAA
GGTGAAGCCAAAGAAGCATCTCAAAAACCAGTGGAACGGTCTGCATGGAATCCCCTAAAC
TATATTAAGATTTCGCGAGAAGTTGATGCAGAAAACAAAACCGAACAGAAGGAGGAAATC
ATTGAAGAACCTGCACGTCCAGTGGGTATGAAAGGAAGAATTATACTGTATACAAGATTA
GGATGCCAGGAAAGTAAAGAGGTTCGGCGATTTCTACTTCAGAGAAGACTCAGATATGTT
GAAATTAACATTGATGTGTACCCTAGCAGAAAGCTAGAGCTAGAAAAAATTGCAGGGTCT
TGTGCTGTTCCGAAGTTGTTTTTTAATGAAGTCCTTATAGGGGGATTGAATGAGGTAAAG
GGCCTTGATGAGTCTGGCAAGCTTGATGAGAAGATTAATTATGTGATTTCTGAAGCACCA
TCATTTGAAGCTCCTTTGCCACCACTTTCTGGTGAAGATGACTTGTCCAGTAGTGGGGCA
ATTGATGAACTAGCTGCTATTGTCCTCAAAATGAAAGAATCTATTGTTGTTAAGGACCGT
TTTTATCGAATGCGCAGGTTCACCAACTGCTTTCTGGGCTCAGAAGCTGTGGATTTTATA
TCAGAAGATCAATACTTGGAAAGGGAAGAGGCTATTGAATTTGGGCGAAAACTTGCAAGT
AAACACTTCTTCCAAAACGTTCTTGATGAGAATGATTTTGAGGATGGCAACCATTTGTAC
CGGTTCTTGGACCATGATCCTGTAGTGTCGTCTCAGTGTCACAATTTCCTGAGGGGCATA
CTTGATGTGAAGCCAAAGCCTATAATAGAAATTGCATCAAGGCTTAGATTTTTGTCTTAT
GCTATCTTTGAAGCTTACACATCAGAAGATGGAAAGCATGTTGATTACAGAAGTATCCAT
GGGAGTGAGGAATTTGCTAGGTATTTGAGAATAGTTGAGGAGCTCCAAAGAGTAGATTTG
CAGGATATGCCAAGGGAAGAGAAGCTTGCTTTCTTTATAAATCTCTACAACATGATGGCC
ATCCATGGAATATTGGTGTGGGGTTTTCCAGTTGGACCACTTGAGAGAAGGAAGCTTCTT
GGAGAATTTAAATATGTTGTTGGTGGGTGCACCTATTCACTTTCTGTTATTGCAAATGGC
ATCTTAAGGGGCAACCAGCGACCGCCATACAACCTCATTAAGCCATTTGGAATGAGAGAC
AGACGTGCCAAGGTGGCTCTTCCTTACCCGGAGCCTCTTATCCACTTTGCACTGGTTTTT
GGTACCCGATCTGGCCCTCCTCTCAAATGCTACTCACCTGGGAACATTGATCAAGAATTG
GTGGAAGCAGCCCGTAATTTTGTAAGAAGTGGAGGATTAATTCTAGATGTTAATGCAAAG
GTCGTATCAGCCAGTAAGCTCCTAAAATGGTATAGTGTAGATTTTGGCAAGAACGAAGTT
GAGGTATTAAAGCATGCAGCAAACTACTTGGAGCCACCCATCTCCGAAGAGTTACTGGAG
GTGCTTGCTACCGGCCAGTTGAAAGTGATATATCAGCCTTATGACTGGGGATTGAACTGC
TAG

Peptide Sequence

PEP ID

VIT_18s0001g04600.t01
PEP Infomation

pep chromosome:12X:18:3913481:3917327:1 gene:VIT_18s0001g04600 transcript:VIT_18s0001g04600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEASRSMSTRPLDLDTETQGSAWPEKAVALKNFVKEKGTVAVSSVLRVLSGKTEEDVHAA
QDDEDKNKTGVKEVVDSPKEGEAKEASQKPVERSAWNPLNYIKISREVDAENKTEQKEEI
IEEPARPVGMKGRIILYTRLGCQESKEVRRFLLQRRLRYVEINIDVYPSRKLELEKIAGS
CAVPKLFFNEVLIGGLNEVKGLDESGKLDEKINYVISEAPSFEAPLPPLSGEDDLSSSGA
IDELAAIVLKMKESIVVKDRFYRMRRFTNCFLGSEAVDFISEDQYLEREEAIEFGRKLAS
KHFFQNVLDENDFEDGNHLYRFLDHDPVVSSQCHNFLRGILDVKPKPIIEIASRLRFLSY
AIFEAYTSEDGKHVDYRSIHGSEEFARYLRIVEELQRVDLQDMPREEKLAFFINLYNMMA
IHGILVWGFPVGPLERRKLLGEFKYVVGGCTYSLSVIANGILRGNQRPPYNLIKPFGMRD
RRAKVALPYPEPLIHFALVFGTRSGPPLKCYSPGNIDQELVEAARNFVRSGGLILDVNAK
VVSASKLLKWYSVDFGKNEVEVLKHAANYLEPPISEELLEVLATGQLKVIYQPYDWGLNC

Transcript Sequence

Transcript ID

VIT_18s0001g04600.t01
Transcript Infomation

cdna chromosome:12X:18:3913481:3917327:1 gene:VIT_18s0001g04600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACAAGGTGGATGATAGGAAGGAATTGGGGTCTGAAAATAAAAAAGAAATGAATCAGGAT
GACTTGAATAACCAGGTTGATGAAAGTAAGGAATTGGAGTCTGAAAATAAAAGCGAAACA
TATCAGGATATCAAGGAAAATCTTAGTGAGGAGAAGGAACCAGAGCCTGTCTTTGATGGA
ACTGAGATTCCTGGGATGGAAGCTAGCAGGAGTATGTCTACCCGTCCTTTGGATCTTGAC
ACAGAAACACAAGGTTCTGCTTGGCCTGAGAAGGCTGTAGCACTTAAAAACTTTGTCAAG
GAGAAAGGTACAGTTGCAGTCTCTAGTGTTTTGCGTGTCCTTTCGGGGAAAACAGAGGAG
GATGTACATGCTGCTCAGGATGATGAAGATAAGAATAAAACTGGTGTTAAGGAGGTTGTA
GATTCCCCCAAAGAAGGTGAAGCCAAAGAAGCATCTCAAAAACCAGTGGAACGGTCTGCA
TGGAATCCCCTAAACTATATTAAGATTTCGCGAGAAGTTGATGCAGAAAACAAAACCGAA
CAGAAGGAGGAAATCATTGAAGAACCTGCACGTCCAGTGGGTATGAAAGGAAGAATTATA
CTGTATACAAGATTAGGATGCCAGGAAAGTAAAGAGGTTCGGCGATTTCTACTTCAGAGA
AGACTCAGATATGTTGAAATTAACATTGATGTGTACCCTAGCAGAAAGCTAGAGCTAGAA
AAAATTGCAGGGTCTTGTGCTGTTCCGAAGTTGTTTTTTAATGAAGTCCTTATAGGGGGA
TTGAATGAGGTAAAGGGCCTTGATGAGTCTGGCAAGCTTGATGAGAAGATTAATTATGTG
ATTTCTGAAGCACCATCATTTGAAGCTCCTTTGCCACCACTTTCTGGTGAAGATGACTTG
TCCAGTAGTGGGGCAATTGATGAACTAGCTGCTATTGTCCTCAAAATGAAAGAATCTATT
GTTGTTAAGGACCGTTTTTATCGAATGCGCAGGTTCACCAACTGCTTTCTGGGCTCAGAA
GCTGTGGATTTTATATCAGAAGATCAATACTTGGAAAGGGAAGAGGCTATTGAATTTGGG
CGAAAACTTGCAAGTAAACACTTCTTCCAAAACGTTCTTGATGAGAATGATTTTGAGGAT
GGCAACCATTTGTACCGGTTCTTGGACCATGATCCTGTAGTGTCGTCTCAGTGTCACAAT
TTCCTGAGGGGCATACTTGATGTGAAGCCAAAGCCTATAATAGAAATTGCATCAAGGCTT
AGATTTTTGTCTTATGCTATCTTTGAAGCTTACACATCAGAAGATGGAAAGCATGTTGAT
TACAGAAGTATCCATGGGAGTGAGGAATTTGCTAGGTATTTGAGAATAGTTGAGGAGCTC
CAAAGAGTAGATTTGCAGGATATGCCAAGGGAAGAGAAGCTTGCTTTCTTTATAAATCTC
TACAACATGATGGCCATCCATGGAATATTGGTGTGGGGTTTTCCAGTTGGACCACTTGAG
AGAAGGAAGCTTCTTGGAGAATTTAAATATGTTGTTGGTGGGTGCACCTATTCACTTTCT
GTTATTGCAAATGGCATCTTAAGGGGCAACCAGCGACCGCCATACAACCTCATTAAGCCA
TTTGGAATGAGAGACAGACGTGCCAAGGTGGCTCTTCCTTACCCGGAGCCTCTTATCCAC
TTTGCACTGGTTTTTGGTACCCGATCTGGCCCTCCTCTCAAATGCTACTCACCTGGGAAC
ATTGATCAAGAATTGGTGGAAGCAGCCCGTAATTTTGTAAGAAGTGGAGGATTAATTCTA
GATGTTAATGCAAAGGTCGTATCAGCCAGTAAGCTCCTAAAATGGTATAGTGTAGATTTT
GGCAAGAACGAAGTTGAGGTATTAAAGCATGCAGCAAACTACTTGGAGCCACCCATCTCC
GAAGAGTTACTGGAGGTGCTTGCTACCGGCCAGTTGAAAGTGATATATCAGCCTTATGAC
TGGGGATTGAACTGCTAGCATTAGTTTTCAGCTACCGTACATGCCAAAAGCAGATTTATA
CCGCTTCCCTGTTTTATCATGGGCCCTGCAATAGGGAAGTATCGATAATTGTGCCATTAA
TGATTTTCTTTTGATTCCATCTATCTGTCATCATTGGCAATGGCACCTAGGGTTCGTAGT
GAATACTGGAGAACTGTCTTAGCATATAAACTTTTGACCTTTGATGAACTTGTTTCAAAG
CACAAGGGAAAATCATTCAATTCACCATTTTTATTCCTTTCTCCTA