Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04540.t01
CDS Infomation

cds chromosome:12X:18:3883733:3898683:-1 gene:VIT_18s0001g04540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTAGAAAAACCAGCAGCTGTAGTATTTGTGAGAAATCGAATCTTGCTTCTATTTGC
GCCGTTTGCGTCAATTACAGATTAAATGAATATAATACTTCATTGAAATCATCGAAGGGT
CGTCGGGACTCCCTTTACTTGAGATTGAGTGAAGTTCTTGTGGCAAAGGGGAAGGCAGAT
GATCAAATAAATTGGAGAGTACTTCAAAATGAGAAGCTGGCCAGGCTGAGGGAGAAGCTT
CGTCATAGAAAAGAACAATATTTGGATGGGAAGGCTAAAGTTGAGAAGATGTCTAATGAT
TTGAAACTCAAATATGGGCTGCTTGAATCAGCCATGTCCATGTTGGAAAAAAATCGCGTG
GAACAACTGGAGAAGTTCTATCCTAACCTTATTTGCACACAGAACTTAGGGCTTATGGCA
ATAACCTCTGAACGTTTTCATAAGCAGTCGGTGGTTATAAAACAGATATGCAAATTATTC
CCTCAACGTCGGGTGAATATTGATGGAGAGAAGAAAGATGGATCTAGTAGGCCATATGAC
CAAATTTGTAATGTACGCTTACCGAGAGTACTTGATCCTCATTCTGTCCCATCAGATGAG
CTTGCTGCCTCATTGGGGTACATGGTGCAACTTCTAAATCTTGTGGTTTACAACTTGGCT
GCTCCTGCCCTTCATAACTCAGGTTTTGCGGGTTCATGCTCTAGAATATGGCAGCGAGAG
TCTTATTGGAATCCACGGCCGTCTTCCAGAAGCAATGAATATCCCCTGTTTATACCGCGA
CAAAATCTTTGCTCCACTAATGGGGAAAATTCATGGTCTGAAAGAAGCTCGAGTAATTTT
GGCATTGCTTCAATGGAATCTGACAGGAAGCCTCGTCTAGAATCCTCAGGAAGTAGTAGT
TTTAACTATTCTTCAGCTTCTCTGCATTCTGTTGAAACTCACAAGGACCTGCAGAAAGGA
ATTTCACTTCTTAAAAAAAGTGTGGCATGCTTAACCACATACTGTTATAGCTCATTATGT
TTAGATGTTCCTACTGAGGCTTCTACATTTGAAGCATTTGCAAAGTTGTTGGCCATACTA
TCTTCTTCCAAGGAAGTTCGATCTGTTTTCTCCTTGAAAATGGCTTGCTCAAGGTCATGT
AAACAAGTTCAACAATTGAACAAATCCATATGGAACATGAATTCAGCAATTTCATCAAGC
ACTTTACTGGAGAGTGCGCATACACTGCCTATGACGAGGAATATTTTCGATAATAACCTT
CCAAATTCTGCTGCTAGTTTCCTTTATACCACTGAGATGTCTGATATTGGAAAGAATGAA
AGCCTTATTGAAGAATGGGATCTTGTGGAGCATGCCAATTTTCCACCTCCACCGTCACAA
ACCGAGGACATTGAGCACTGGACTCGAGCCATGATAATTGATGCTACAAAAAAATGA

Peptide Sequence

PEP ID

VIT_18s0001g04540.t01
PEP Infomation

pep chromosome:12X:18:3883733:3898683:-1 gene:VIT_18s0001g04540 transcript:VIT_18s0001g04540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTRKTSSCSICEKSNLASICAVCVNYRLNEYNTSLKSSKGRRDSLYLRLSEVLVAKGKAD
DQINWRVLQNEKLARLREKLRHRKEQYLDGKAKVEKMSNDLKLKYGLLESAMSMLEKNRV
EQLEKFYPNLICTQNLGLMAITSERFHKQSVVIKQICKLFPQRRVNIDGEKKDGSSRPYD
QICNVRLPRVLDPHSVPSDELAASLGYMVQLLNLVVYNLAAPALHNSGFAGSCSRIWQRE
SYWNPRPSSRSNEYPLFIPRQNLCSTNGENSWSERSSSNFGIASMESDRKPRLESSGSSS
FNYSSASLHSVETHKDLQKGISLLKKSVACLTTYCYSSLCLDVPTEASTFEAFAKLLAIL
SSSKEVRSVFSLKMACSRSCKQVQQLNKSIWNMNSAISSSTLLESAHTLPMTRNIFDNNL
PNSAASFLYTTEMSDIGKNESLIEEWDLVEHANFPPPPSQTEDIEHWTRAMIIDATKK

Transcript Sequence

Transcript ID

VIT_18s0001g04540.t01
Transcript Infomation

cdna chromosome:12X:18:3883733:3898683:-1 gene:VIT_18s0001g04540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAACAACGCTCCCGTTGGGAGCTCGATTGCTCGGAACGAAAGACGCTCACTATAACTAAT
CACGAATTCTGCCGGATTTGATATAAAACCCTAGATTCAACCTTTTCAACGGCCACAAGC
TCTTGTGATCTCTGATCCTCCGTTCGCACCGACTTTACTTCCGGCTAGGGTTTTAAAGAT
TGGCAGTGTGATCGTTGTTGAAAAGCGAAACCATGACTAGAAAAACCAGCAGCTGTAGTA
TTTGTGAGAAATCGAATCTTGCTTCTATTTGCGCCGTTTGCGTCAATTACAGATTAAATG
AATATAATACTTCATTGAAATCATCGAAGGGTCGTCGGGACTCCCTTTACTTGAGATTGA
GTGAAGTTCTTGTGGCAAAGGGGAAGGCAGATGATCAAATAAATTGGAGAGTACTTCAAA
ATGAGAAGCTGGCCAGGCTGAGGGAGAAGCTTCGTCATAGAAAAGAACAATATTTGGATG
GGAAGGCTAAAGTTGAGAAGATGTCTAATGATTTGAAACTCAAATATGGGCTGCTTGAAT
CAGCCATGTCCATGTTGGAAAAAAATCGCGTGGAACAACTGGAGAAGTTCTATCCTAACC
TTATTTGCACACAGAACTTAGGGCTTATGGCAATAACCTCTGAACGTTTTCATAAGCAGT
CGGTGGTTATAAAACAGATATGCAAATTATTCCCTCAACGTCGGGTGAATATTGATGGAG
AGAAGAAAGATGGATCTAGTAGGCCATATGACCAAATTTGTAATGTACGCTTACCGAGAG
TACTTGATCCTCATTCTGTCCCATCAGATGAGCTTGCTGCCTCATTGGGGTACATGGTGC
AACTTCTAAATCTTGTGGTTTACAACTTGGCTGCTCCTGCCCTTCATAACTCAGGTTTTG
CGGGTTCATGCTCTAGAATATGGCAGCGAGAGTCTTATTGGAATCCACGGCCGTCTTCCA
GAAGCAATGAATATCCCCTGTTTATACCGCGACAAAATCTTTGCTCCACTAATGGGGAAA
ATTCATGGTCTGAAAGAAGCTCGAGTAATTTTGGCATTGCTTCAATGGAATCTGACAGGA
AGCCTCGTCTAGAATCCTCAGGAAGTAGTAGTTTTAACTATTCTTCAGCTTCTCTGCATT
CTGTTGAAACTCACAAGGACCTGCAGAAAGGAATTTCACTTCTTAAAAAAAGTGTGGCAT
GCTTAACCACATACTGTTATAGCTCATTATGTTTAGATGTTCCTACTGAGGCTTCTACAT
TTGAAGCATTTGCAAAGTTGTTGGCCATACTATCTTCTTCCAAGGAAGTTCGATCTGTTT
TCTCCTTGAAAATGGCTTGCTCAAGGTCATGTAAACAAGTTCAACAATTGAACAAATCCA
TATGGAACATGAATTCAGCAATTTCATCAAGCACTTTACTGGAGAGTGCGCATACACTGC
CTATGACGAGGAATATTTTCGATAATAACCTTCCAAATTCTGCTGCTAGTTTCCTTTATA
CCACTGAGATGTCTGATATTGGAAAGAATGAAAGCCTTATTGAAGAATGGGATCTTGTGG
AGCATGCCAATTTTCCACCTCCACCGTCACAAACCGAGGACATTGAGCACTGGACTCGAG
CCATGATAATTGATGCTACAAAAAAATGACCGGCGCTCCTGCTGGTTGCTACTTTTTTGT
TCCAGAGACTACGCTTATTAAAGGACAAGACTCAGGAGCAAATTGTAAATTTTTCTACAA
TATTCTTAGTCATTATCTTGTTATACTTGTAAATAAAGATTATCTCAATGAGTGTGCATA
GGTAGATTTGGGATTTTTCTTTTGTTTTCTACTTGTTATATATTCCTTGCAGTTAATCCT
TAATGCAACCTCAGAAGAAGAGGGAAAATGAATTATGTAGTATTTTTACTCAGAATTAAA
ATACCAAAAA