Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g04400.t01
CDS Infomation	cds chromosome:12X:18:3842548:3845101:-1 gene:VIT_18s0001g04400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:E0CRE2]
Sequence	ATGGCAGAGCAAACCCAGATAGAAATCAAACCTCCACAACCCGCTCACCATTCCGATGCC GGTGATGATCAAGTGCTAGAGCAGCAGGTTCGGTTCTTCAAGTCTGGCACTCGAAAGAGA GAGGACAGCTGGGTCATCTCCCTCTTCGTGGTCCTCCACATTGTAGCCTTCGCAGCCACC ATGTTTGTCAATGATTGTTGGCAAAACTCTCACCGTGATTGCGCCATCAAAGTTCTTGGA CGCCTGTCCTTTCAGCCACTTTGGGAGAATCCGCTGCTCGGTCCTTCCTCGTCCACTCTA GATGAAATGGGGGCTCTTCAACAGACATTTTTGGCAAATCATCATCAAACTTGGCGTCTT TTCACGTGCCTATGGCTGCATGCTGGAGCAATTCACCTTATTATTAACCTTTCTAGTGTT ATTTTTGTTGGAATTCACTTGGAACAAGAGTTTGGACCACTGAGGATTGGTATGGTATAC ATACTATCTGCTTTTTTCGGTAGTTTGGTAGCTACCCTTTTTCTTCAAAAGAGCCCTGCA GTTGGTTCATCTGGTGCTCTGTTTGGACTACTAGGCTCCATGCTTTCCGGTCTTATATGT AACTGGAAAGTTTACACTGATAAGCTTGCAGCTCTGTCTGCACTTCTCCTTGTAGCCGTG ATCAATTTTGCACTTGGCTTGCTACCTTATGTTGACAACTTTTCAAACTTGGGAGGGTTT ATATCAGGGGTCCTTCTAGGATTTGTTCTCCTATTCAGCCCTAGGCTTCCAAGAATGGCT GAAAAAAAAGGTGGCTTCTTTGATTACAGTGTCAAAAAATCCATCAGATTAAAGCAGAAA TTGGACAGGCCGGTGCTGAGGAGTGTTTCTTTTGTTCTCTTTGGTCTTGTATTAGCAGGA GCCATTGTTGCTGTTCTTCATGGCATAGACATGAACAAATACTGCAGTTGGTGTCAGTAT ATCAATTGTGTCCCTTCCAACAGGTGGAGCTGCAATACCAAAGTAACAGCTTGTCAGGTA GAGTTGTGA

Peptide Sequence

PEP ID	VIT_18s0001g04400.t01
PEP Infomation	pep chromosome:12X:18:3842548:3845101:-1 gene:VIT_18s0001g04400 transcript:VIT_18s0001g04400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:E0CRE2]
Sequence	MAEQTQIEIKPPQPAHHSDAGDDQVLEQQVRFFKSGTRKREDSWVISLFVVLHIVAFAAT MFVNDCWQNSHRDCAIKVLGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTWRL FTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGMVYILSAFFGSLVATLFLQKSPA VGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLVAVINFALGLLPYVDNFSNLGGF ISGVLLGFVLLFSPRLPRMAEKKGGFFDYSVKKSIRLKQKLDRPVLRSVSFVLFGLVLAG AIVAVLHGIDMNKYCSWCQYINCVPSNRWSCNTKVTACQVEL

Transcript Sequence

Transcript ID	VIT_18s0001g04400.t01
Transcript Infomation	cdna chromosome:12X:18:3842548:3845101:-1 gene:VIT_18s0001g04400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:E0CRE2]
Sequence	ATGGCAGAGCAAACCCAGATAGAAATCAAACCTCCACAACCCGCTCACCATTCCGATGCC GGTGATGATCAAGTGCTAGAGCAGCAGGTTCGGTTCTTCAAGTCTGGCACTCGAAAGAGA GAGGACAGCTGGGTCATCTCCCTCTTCGTGGTCCTCCACATTGTAGCCTTCGCAGCCACC ATGTTTGTCAATGATTGTTGGCAAAACTCTCACCGTGATTGCGCCATCAAAGTTCTTGGA CGCCTGTCCTTTCAGCCACTTTGGGAGAATCCGCTGCTCGGTCCTTCCTCGTCCACTCTA GATGAAATGGGGGCTCTTCAACAGACATTTTTGGCAAATCATCATCAAACTTGGCGTCTT TTCACGTGCCTATGGCTGCATGCTGGAGCAATTCACCTTATTATTAACCTTTCTAGTGTT ATTTTTGTTGGAATTCACTTGGAACAAGAGTTTGGACCACTGAGGATTGGTATGGTATAC ATACTATCTGCTTTTTTCGGTAGTTTGGTAGCTACCCTTTTTCTTCAAAAGAGCCCTGCA GTTGGTTCATCTGGTGCTCTGTTTGGACTACTAGGCTCCATGCTTTCCGGTCTTATATGT AACTGGAAAGTTTACACTGATAAGCTTGCAGCTCTGTCTGCACTTCTCCTTGTAGCCGTG ATCAATTTTGCACTTGGCTTGCTACCTTATGTTGACAACTTTTCAAACTTGGGAGGGTTT ATATCAGGGGTCCTTCTAGGATTTGTTCTCCTATTCAGCCCTAGGCTTCCAAGAATGGCT GAAAAAAAAGGTGGCTTCTTTGATTACAGTGTCAAAAAATCCATCAGATTAAAGCAGAAA TTGGACAGGCCGGTGCTGAGGAGTGTTTCTTTTGTTCTCTTTGGTCTTGTATTAGCAGGA GCCATTGTTGCTGTTCTTCATGGCATAGACATGAACAAATACTGCAGTTGGTGTCAGTAT ATCAATTGTGTCCCTTCCAACAGGTGGAGCTGCAATACCAAAGTAACAGCTTGTCAGGTA GAGTTGTGA