Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04340.t01
CDS Infomation

cds chromosome:12X:18:3822948:3829597:1 gene:VIT_18s0001g04340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCGTCTCATGCTCAGTCGGGTCTCTCTCTAGGGTTTCATTCGCATTCATCGCTA
GCTCCCATGACGCCGCTCGCTGACGATTCGGTGAAGCTGCAGATTGCTTCGGATTTTAGC
AGTCTGGGGAATCCTATTCAATCCGTTCCACTGCAATTGTTTGAGCAAAGATGCGAGAAA
TTTTCTAATGGAAGTGGAGGACAGTCTGAAGACGGAGAGGATGAGGAGTTTCATATTTTG
GGGCATCCCATGTGTTTGAAGAGGCCGAGAGACGAGCAATTTTCGAGGTCTTCTAGCCCT
TCTAAGGTGGCTTTGGTTGAGTCCGGGCTTGAGCAGAGGCGAGTAGCGGTGAGGGCTTGG
GGAAACCAGCCGCTTAGTGTTGCTGATCCTGATGTTTTCCAAATAATGGAGAAGGAGAAG
AAGAGGCAGTTTAAAGGAATTGAGCTTATAGCTTCTGAGAATTTTGTGTGTAGGGCTGTG
ATGGAAGCCCTTGGGAGCCATTTGACAAACAAATATTCAGAAGGAATGCCAGGTGCAAGA
TATTACACGGGTAATGACTACATTGATCAGATTGAATTACTTTGCTGCAGGCGTGCCTTG
GCGGCTTTTCATCTTGATTCTGAGAAATGGGGTGTAAATGTCCAGCCATATTCGTGTACA
TCAGCTAATTTTGCTGTGTACACTGGGCTTTTACTTCCCAAGGATCGGATTATGGGTTTG
GATTCGCCCTCTGGTGGTCATCTGAGTCATGGGTATTACATGCCAAGCGGGAAAAAGGTT
TCAGGTACATCAATATTTTTTGAGAGTCTCCCTTATAAAGTGAACCCACAAACTGGGTAT
ATTGATTATGATAAACTAGAGGAGAAGGCTCTTGATTTCCGTCCCAAGATACTTATTTGT
GGTGGGAGTTCATATCCACGGGAGTGGAATTACGCAAGGTTCAGGCAGATTGCAGATAAA
TGTGGCGCAGTATTAATGTGTGACATGGCTCAGATTAGCGGTATTGTGGCGGCTAAGGAG
TGTGCAAGTCCGTTTGATTATTGTGATATTGTTACCTCGACAACTCACAAAAATCTCCGA
GGTCCTAGGGGAGGTATTATTTTTTACAGAAAAGGTGCAAAGGCAAGGAAGCCTGGCATG
CTTCTTAGCCAAGGAGATGATAGTAACCAATATGATTTTGAGGAGAGGATAAACTTTGCT
GTCTTCCCTTCATTACAAGGGGGCCCTCACAATAATCACATAGCTGCTCTTGCCATAGCC
TTAAAACAAGTGGCCACACCAGAGTACAAAGCATATATGCAACAGGTGAAAAAAAATGCT
CAGGCTTTAGCAGCTGCTTTGCTCAGAAAAAGTTGCAAATTGGTGACAGAAGGTACTGAC
AACCATTTGTTGCTCTGGGATCTTACAGATCTACACATAACAGGCAAGAACTATGAGAAG
GTCTGTGAGCTGTGCCACATTACTCTCAATAAAACTGCTATATATGGTGACAATGGTGCC
ATTTCCCCTGGAGGGGTAAGGATCGGTTCTCCTGCCATGACAACAAGAGGTTGTCTGGAG
GCTGATTTTGAGACAATTGCAGAGTTTCTCTACAGAGCAGCTGTGATTACAAGTGCAGTT
GTTACACAAAGAGAACTTAGAAAGTTTCCGCGAGATTTTTTCAAGTGTCTCCAGAACAAC
AAGGATATTGTTGAGCTCCGAAATCAAGTGGAGACATTTGCTTCCCAGTTTGCAATGCCA
GGGTTTGACATTTGA

Peptide Sequence

PEP ID

VIT_18s0001g04340.t01
PEP Infomation

pep chromosome:12X:18:3822948:3829597:1 gene:VIT_18s0001g04340 transcript:VIT_18s0001g04340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDASHAQSGLSLGFHSHSSLAPMTPLADDSVKLQIASDFSSLGNPIQSVPLQLFEQRCEK
FSNGSGGQSEDGEDEEFHILGHPMCLKRPRDEQFSRSSSPSKVALVESGLEQRRVAVRAW
GNQPLSVADPDVFQIMEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAR
YYTGNDYIDQIELLCCRRALAAFHLDSEKWGVNVQPYSCTSANFAVYTGLLLPKDRIMGL
DSPSGGHLSHGYYMPSGKKVSGTSIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC
GGSSYPREWNYARFRQIADKCGAVLMCDMAQISGIVAAKECASPFDYCDIVTSTTHKNLR
GPRGGIIFYRKGAKARKPGMLLSQGDDSNQYDFEERINFAVFPSLQGGPHNNHIAALAIA
LKQVATPEYKAYMQQVKKNAQALAAALLRKSCKLVTEGTDNHLLLWDLTDLHITGKNYEK
VCELCHITLNKTAIYGDNGAISPGGVRIGSPAMTTRGCLEADFETIAEFLYRAAVITSAV
VTQRELRKFPRDFFKCLQNNKDIVELRNQVETFASQFAMPGFDI

Transcript Sequence

Transcript ID

VIT_18s0001g04340.t01
Transcript Infomation

cdna chromosome:12X:18:3822948:3829597:1 gene:VIT_18s0001g04340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACGATCGCTTCACCTATCTGTCGTTCTCCTCCCGTGTAGGGTTTGTGGCACCTTCATGG
AAACCCCTGTAAATCCTTCAAATTCTCGCAGTAATCGATCGCCTCTTCGCTACTTGTATT
GCAGTTGCTTTCGGCGTTGTTGTCGTTGTTTTTGTTGTTGCTATTCTTATCCTTAGCGCC
CAATTTTCATTTGTTTTTCGAGGGTTTTATGGATGCGTCTCATGCTCAGTCGGGTCTCTC
TCTAGGGTTTCATTCGCATTCATCGCTAGCTCCCATGACGCCGCTCGCTGACGATTCGGT
GAAGCTGCAGATTGCTTCGGATTTTAGCAGTCTGGGGAATCCTATTCAATCCGTTCCACT
GCAATTGTTTGAGCAAAGATGCGAGAAATTTTCTAATGGAAGTGGAGGACAGTCTGAAGA
CGGAGAGGATGAGGAGTTTCATATTTTGGGGCATCCCATGTGTTTGAAGAGGCCGAGAGA
CGAGCAATTTTCGAGGTCTTCTAGCCCTTCTAAGGTGGCTTTGGTTGAGTCCGGGCTTGA
GCAGAGGCGAGTAGCGGTGAGGGCTTGGGGAAACCAGCCGCTTAGTGTTGCTGATCCTGA
TGTTTTCCAAATAATGGAGAAGGAGAAGAAGAGGCAGTTTAAAGGAATTGAGCTTATAGC
TTCTGAGAATTTTGTGTGTAGGGCTGTGATGGAAGCCCTTGGGAGCCATTTGACAAACAA
ATATTCAGAAGGAATGCCAGGTGCAAGATATTACACGGGTAATGACTACATTGATCAGAT
TGAATTACTTTGCTGCAGGCGTGCCTTGGCGGCTTTTCATCTTGATTCTGAGAAATGGGG
TGTAAATGTCCAGCCATATTCGTGTACATCAGCTAATTTTGCTGTGTACACTGGGCTTTT
ACTTCCCAAGGATCGGATTATGGGTTTGGATTCGCCCTCTGGTGGTCATCTGAGTCATGG
GTATTACATGCCAAGCGGGAAAAAGGTTTCAGGTACATCAATATTTTTTGAGAGTCTCCC
TTATAAAGTGAACCCACAAACTGGGTATATTGATTATGATAAACTAGAGGAGAAGGCTCT
TGATTTCCGTCCCAAGATACTTATTTGTGGTGGGAGTTCATATCCACGGGAGTGGAATTA
CGCAAGGTTCAGGCAGATTGCAGATAAATGTGGCGCAGTATTAATGTGTGACATGGCTCA
GATTAGCGGTATTGTGGCGGCTAAGGAGTGTGCAAGTCCGTTTGATTATTGTGATATTGT
TACCTCGACAACTCACAAAAATCTCCGAGGTCCTAGGGGAGGTATTATTTTTTACAGAAA
AGGTGCAAAGGCAAGGAAGCCTGGCATGCTTCTTAGCCAAGGAGATGATAGTAACCAATA
TGATTTTGAGGAGAGGATAAACTTTGCTGTCTTCCCTTCATTACAAGGGGGCCCTCACAA
TAATCACATAGCTGCTCTTGCCATAGCCTTAAAACAAGTGGCCACACCAGAGTACAAAGC
ATATATGCAACAGGTGAAAAAAAATGCTCAGGCTTTAGCAGCTGCTTTGCTCAGAAAAAG
TTGCAAATTGGTGACAGAAGGTACTGACAACCATTTGTTGCTCTGGGATCTTACAGATCT
ACACATAACAGGCAAGAACTATGAGAAGGTCTGTGAGCTGTGCCACATTACTCTCAATAA
AACTGCTATATATGGTGACAATGGTGCCATTTCCCCTGGAGGGGTAAGGATCGGTTCTCC
TGCCATGACAACAAGAGGTTGTCTGGAGGCTGATTTTGAGACAATTGCAGAGTTTCTCTA
CAGAGCAGCTGTGATTACAAGTGCAGTTGTTACACAAAGAGAACTTAGAAAGTTTCCGCG
AGATTTTTTCAAGTGTCTCCAGAACAACAAGGATATTGTTGAGCTCCGAAATCAAGTGGA
GACATTTGCTTCCCAGTTTGCAATGCCAGGGTTTGACATTTGAATTTGTTAACAGAAGCA
ACATCACCATTTTGCTTCAGGGGATTACTACCACTTTGCTTGGTGACCCATCCTTTTTGG
TTAATCCCTTCCACTGTTCAACCCCATTCATCTACGTTCTATTACTGCAGAACCAGTTTA
TACACTAGAATAGTGCTGAGATGTTACGATCATCGTTCACCCTCACCCAAATGCTTGCCA
ACTTGTTTAAGGTTTTGTAAAAATTATATAGAGAGGGCTTCATCCATTTTTTTCTTATAT
ATATTTTTGTGTAAAATGCCACAGGAAACTTGGAATTTGGACAGGTCTGTGACCATGACC
TGTATTGTTTACCGTTTTGAATACATGT