Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04190.t01
CDS Infomation

cds chromosome:12X:18:3759293:3763520:1 gene:VIT_18s0001g04190 gene_biotype:protein_coding transcript_biotype:protein_coding description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:E0CRD7]
Sequence

ATGGCCTTTTCTCTCTCTAACCACCTCCTCTTCACCCCAAAACCCTCTAAAACCCTTGCT
CTTCATCCTCCTCATCCCTCTAAACCCATTCTAGGGTTTCGTCTCTCTACTTCCTCCCCA
ATTCTCAGACGTTCCTTCAAGCCTTTTCTCGCTCTCCAAGATTCTACTCCCTATACAAAC
AATGAAGAGGAGGGTAGTCGGTATGATGTTAAAACATCAAAAAGTGAAGCAGATCAGAAA
CCTCTGTCTGTTTTGAAGTCGCTTATTAAAGCATACAAAGATGCTGTTTTAGATGGAGAT
GAAAAGGCTGTATCTGAAATTGAAGCAATGATAGACACGATTGAAAGTGAGAAGGCTGAA
TTGGCACAGAAAGTTTCTGCTTTATCAGCAGAAATAACATCTGGGAAGGAGAAATATATT
CGTTTACAAGCAGATTTTGATAATTTTAGGAAAAGATCAGAGAAGGAAAGGCTTACAGTA
AGAACTGATGCTCAAGGAGAAGTAGTTGAGAGCCTTTTGCCCATGATTGACAATTTTGAG
AGAGCCAAACAACAAATCAAACCTGAAACTGAAAAGGAGAAAAAAATTGATACAAGCTAT
CAGGGTATATACAAGCAATTTGTGGAGATCATGAGGAGTTGTCATGTGGCTGCTGTAGCA
ACAGTGGGAAAGCCATTTGATCCTGCACTGCATGAGGCCATTGCCCGTGAGGAGTCTCAA
GAATTCAAGGAAGGGATTATAATTCAAGAAATTCGCCGGGGCTTCCTCCTTGGTGATCGA
CTTCTAAGACCAGCAATGGTTAAAGTCTCCACAGGCCCTGGTAGGAAGAAAACTTCTGCT
GTTGCTGATAAATCTACAGGCCAACCTGCAACAGCTGCTGGAGTAGATGAACGATAG

Peptide Sequence

PEP ID

VIT_18s0001g04190.t01
PEP Infomation

pep chromosome:12X:18:3759293:3763520:1 gene:VIT_18s0001g04190 transcript:VIT_18s0001g04190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:E0CRD7]
Sequence

MAFSLSNHLLFTPKPSKTLALHPPHPSKPILGFRLSTSSPILRRSFKPFLALQDSTPYTN
NEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLDGDEKAVSEIEAMIDTIESEKAE
LAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRTDAQGEVVESLLPMIDNFE
RAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATVGKPFDPALHEAIAREESQ
EFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSAVADKSTGQPATAAGVDER

Transcript Sequence

Transcript ID

VIT_18s0001g04190.t01
Transcript Infomation

cdna chromosome:12X:18:3759293:3763520:1 gene:VIT_18s0001g04190 gene_biotype:protein_coding transcript_biotype:protein_coding description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:E0CRD7]
Sequence

AAGAGAGGGCCGATAAAATCCGAGAAGCATTAACCAACATACTGTTGTTAGGACAAGGAA
GAAAGTGCAAAAGGATGGCCTTTTCTCTCTCTAACCACCTCCTCTTCACCCCAAAACCCT
CTAAAACCCTTGCTCTTCATCCTCCTCATCCCTCTAAACCCATTCTAGGGTTTCGTCTCT
CTACTTCCTCCCCAATTCTCAGACGTTCCTTCAAGCCTTTTCTCGCTCTCCAAGATTCTA
CTCCCTATACAAACAATGAAGAGGAGGGTAGTCGGTATGATGTTAAAACATCAAAAAGTG
AAGCAGATCAGAAACCTCTGTCTGTTTTGAAGTCGCTTATTAAAGCATACAAAGATGCTG
TTTTAGATGGAGATGAAAAGGCTGTATCTGAAATTGAAGCAATGATAGACACGATTGAAA
GTGAGAAGGCTGAATTGGCACAGAAAGTTTCTGCTTTATCAGCAGAAATAACATCTGGGA
AGGAGAAATATATTCGTTTACAAGCAGATTTTGATAATTTTAGGAAAAGATCAGAGAAGG
AAAGGCTTACAGTAAGAACTGATGCTCAAGGAGAAGTAGTTGAGAGCCTTTTGCCCATGA
TTGACAATTTTGAGAGAGCCAAACAACAAATCAAACCTGAAACTGAAAAGGAGAAAAAAA
TTGATACAAGCTATCAGGGTATATACAAGCAATTTGTGGAGATCATGAGGAGTTGTCATG
TGGCTGCTGTAGCAACAGTGGGAAAGCCATTTGATCCTGCACTGCATGAGGCCATTGCCC
GTGAGGAGTCTCAAGAATTCAAGGAAGGGATTATAATTCAAGAAATTCGCCGGGGCTTCC
TCCTTGGTGATCGACTTCTAAGACCAGCAATGGTTAAAGTCTCCACAGGCCCTGGTAGGA
AGAAAACTTCTGCTGTTGCTGATAAATCTACAGGCCAACCTGCAACAGCTGCTGGAGTAG
ATGAACGATAGTTCAGTTGCACAAACATGAGTTGAAATTTTCAAGTGAGAATTTTCACTT
GCGGTGACCACCCTGGTATCCATTTCCTATTGAAGTTTTTGTTCAATATTTTCTTTCATT
TTCTACACAGACTAGCACAATCCCTCAGGCAAATTTACTTCTGCCTTGCATTCAACTACT
ACATATACTGTTGTTTCCATTGTAGGAAAAAAAACGAAACTGGAAGACAACAACTCAATT
TAACTGCTCTGGTTTATTTGTCCCGCGGTTGGGAAAGAATGGGCGATCATTTTCGAG