Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g04140.t01
CDS Infomation

cds chromosome:12X:18:3725171:3732449:-1 gene:VIT_18s0001g04140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAACGCCGACCCGTTCGCCTCATCGACCGCGCCACTGACCTGGCATGACTTTCTG
GAGCGCATGCGACAACCCTCCGCCGCTGATTTCGTCAAAGCAATCAAAAGTTTTATCGTG
TCATTCTCAAACAATGCACCAGATCCTGAACGGGACAGTGCTGCTGTGCAAGAGTTTCTT
GCCAACATGGAAATGGCTTTCAGGGCTCATCCGCTTTGGGCTGGTTGCTCTGAGGAGGAG
CTGGAGAGTGCTGGTGAAGGGTTGGAGAAGTATGTCATGACAAAGTTATATACTCGCGTA
TTTGCTTCGGTCCCAGATGATTCAAAGTTAGATGAACAACTTTTTGAGAAGATCGGTTTA
GTTCAACAGTTCATTCGTCCAGAACAATTGGATATTAAAACAACCTTTCAAAATGAAACA
TCATGGCTGCTTGCACAGAAAGAGCTACAAAAGATCAATATGTACAAGGCACCAAGAGAT
AAACTTGTCTGTATTCTCAATTGTTGCAAGGTCATCAATAATTTGTTGCTTAATGCTTCT
ATTGCTTCGAATGAGGATCCTCCTGGAGCTGATGAGTTTCTTCCTGTCCTAATTTATGTT
ACCTTAAAGGCAAACCCTCCACAACTGCACTCAAATTTGTTGTATATACTACGGTACAGG
CGTCAATCCAGAATGGTTGCAGAAGCAGCTTACTTTTTCACAAACATGCTCTCTGCAGAG
TCATTCATCTCAAACATCAATGCAGAATCCCTTTCAATGGATGAAAGAGAGTTTGAAATG
AACATGGAATCTGCTCGAGCACTTCTATCTGGCCTCTCGTCTGATTTGGATGGTGTGTTG
AAGGAACCTCAACAAAAATCTTTGTACTCTACGAAGGAAAAGGACCCTTCAATAGGATCT
GATCTATCATTGCTATCATCTGAAGCAACATCTGGGGCAAAGTTGGAACCTCATGCAAAA
GATCAGTTAATAACAAAAGTTCCATCCATTTCTGATTTGGAGAATAAAGGGGCAGCTATG
CTTCTGAAAGAGGATCAGGCTAGCCTAGCCTTCCGGGAGTACCCATACTTGTATGCCAAT
GTTGGTGACCTAACAGTCAATGATGTAGAAGATCTACTAAATCATTATAAACAACTTGTT
TTCAAGCATGTTTGCCTTTCCAAAGGATTGGGTGTCCCTGCTCCACCCCTTCCATTGTCC
ATTTCACAAACTCAAGCCCAAAAGCATGCTGAAACCATGAAGGACTCTGCAGACACCCGA
GCTGCTGAAGTGAAGGACAACACCCTTAACGATATTGGTAGCACCAATGATGTTTCAAAT
CAAGTTTCACTTTTTGAAGTGGAAACCTCTGAATCCAAGTTACCACAAGAGGAAGCAGTT
GTACCCCAATAA

Peptide Sequence

PEP ID

VIT_18s0001g04140.t01
PEP Infomation

pep chromosome:12X:18:3725171:3732449:-1 gene:VIT_18s0001g04140 transcript:VIT_18s0001g04140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENADPFASSTAPLTWHDFLERMRQPSAADFVKAIKSFIVSFSNNAPDPERDSAAVQEFL
ANMEMAFRAHPLWAGCSEEELESAGEGLEKYVMTKLYTRVFASVPDDSKLDEQLFEKIGL
VQQFIRPEQLDIKTTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNAS
IASNEDPPGADEFLPVLIYVTLKANPPQLHSNLLYILRYRRQSRMVAEAAYFFTNMLSAE
SFISNINAESLSMDEREFEMNMESARALLSGLSSDLDGVLKEPQQKSLYSTKEKDPSIGS
DLSLLSSEATSGAKLEPHAKDQLITKVPSISDLENKGAAMLLKEDQASLAFREYPYLYAN
VGDLTVNDVEDLLNHYKQLVFKHVCLSKGLGVPAPPLPLSISQTQAQKHAETMKDSADTR
AAEVKDNTLNDIGSTNDVSNQVSLFEVETSESKLPQEEAVVPQ

Transcript Sequence

Transcript ID

VIT_18s0001g04140.t01
Transcript Infomation

cdna chromosome:12X:18:3725171:3732449:-1 gene:VIT_18s0001g04140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGACCTTGGTGTTGAGGGTTGTATAGCAAAAGCTGGGCCTGCGGGGGCCCATTAAGAAA
TGGGCTTGGCGGGTTTCAGGACAGTTTTGACGGACATACTTCTCTTTCTCTCTCTTTCGG
CTTCCAAATTTGTCTCTGATCCAACGTCAGTCAGTCCCATTCCCCGGCTAGTTCATCCCG
CTTGCGTCCCCTCGGAAGCTCAGACTCAACAAATTCCTGCAACGGAGGATGGAGAACGCC
GACCCGTTCGCCTCATCGACCGCGCCACTGACCTGGCATGACTTTCTGGAGCGCATGCGA
CAACCCTCCGCCGCTGATTTCGTCAAAGCAATCAAAAGTTTTATCGTGTCATTCTCAAAC
AATGCACCAGATCCTGAACGGGACAGTGCTGCTGTGCAAGAGTTTCTTGCCAACATGGAA
ATGGCTTTCAGGGCTCATCCGCTTTGGGCTGGTTGCTCTGAGGAGGAGCTGGAGAGTGCT
GGTGAAGGGTTGGAGAAGTATGTCATGACAAAGTTATATACTCGCGTATTTGCTTCGGTC
CCAGATGATTCAAAGTTAGATGAACAACTTTTTGAGAAGATCGGTTTAGTTCAACAGTTC
ATTCGTCCAGAACAATTGGATATTAAAACAACCTTTCAAAATGAAACATCATGGCTGCTT
GCACAGAAAGAGCTACAAAAGATCAATATGTACAAGGCACCAAGAGATAAACTTGTCTGT
ATTCTCAATTGTTGCAAGGTCATCAATAATTTGTTGCTTAATGCTTCTATTGCTTCGAAT
GAGGATCCTCCTGGAGCTGATGAGTTTCTTCCTGTCCTAATTTATGTTACCTTAAAGGCA
AACCCTCCACAACTGCACTCAAATTTGTTGTATATACTACGGTACAGGCGTCAATCCAGA
ATGGTTGCAGAAGCAGCTTACTTTTTCACAAACATGCTCTCTGCAGAGTCATTCATCTCA
AACATCAATGCAGAATCCCTTTCAATGGATGAAAGAGAGTTTGAAATGAACATGGAATCT
GCTCGAGCACTTCTATCTGGCCTCTCGTCTGATTTGGATGGTGTGTTGAAGGAACCTCAA
CAAAAATCTTTGTACTCTACGAAGGAAAAGGACCCTTCAATAGGATCTGATCTATCATTG
CTATCATCTGAAGCAACATCTGGGGCAAAGTTGGAACCTCATGCAAAAGATCAGTTAATA
ACAAAAGTTCCATCCATTTCTGATTTGGAGAATAAAGGGGCAGCTATGCTTCTGAAAGAG
GATCAGGCTAGCCTAGCCTTCCGGGAGTACCCATACTTGTATGCCAATGTTGGTGACCTA
ACAGTCAATGATGTAGAAGATCTACTAAATCATTATAAACAACTTGTTTTCAAGCATGTT
TGCCTTTCCAAAGGATTGGGTGTCCCTGCTCCACCCCTTCCATTGTCCATTTCACAAACT
CAAGCCCAAAAGCATGCTGAAACCATGAAGGACTCTGCAGACACCCGAGCTGCTGAAGTG
AAGGACAACACCCTTAACGATATTGGTAGCACCAATGATGTTTCAAATCAAGTTTCACTT
TTTGAAGTGGAAACCTCTGAATCCAAGTTACCACAAGAGGAAGCAGTTGTACCCCAATAA
CTGGTATTCATGTTTAATTTAGGAGTTTATTAATTTTGAATGGTGGTCCTCTGGGCAATT
TTTGGTTTTTTACCCATTGTAACTGTACTATGGATTTCACTGTATTTCAATTTATTTTCA
AATGCAAGAAGCAATACAGTTGAAGTATCTTTTCCATGAAGAGGAGATCCTGTTATACAA
GATGCAGGTGCGCATAGAGAAGAACATCAAGAGAATTCATTCTTGATGAAACTGCAATTC
TATTTCCTCCCGAAGGTAGGCTTTTC