Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03990.t01
CDS Infomation

cds chromosome:12X:18:3638981:3646405:1 gene:VIT_18s0001g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAGAAGTGAACCCACGTTAGTTCCAGAATGGTTGAGAAGTACTGGAAGTGTTACT
GGGGGTGGCAACTCAGCCCACCATTTTGCTACATCATCTTCGCACACAGATATTTCTCCA
CGCTCCACAAGAAATAGATCTTCTAAGAATACAAGTGATTATGAAAGCCCTCGTTCGGCA
TTTTTAGACCGGACCTCCTCATCCAATTCACGGAGGAATTTGGTCAGTAATGGTTTTCCA
AAGCATGACAAGGAATCTAATGCTCGCGCATATAGTAGTTTCTCCAGAAGTCACCGTGAT
AAGGACCGTGATAGGGAGAAAGATAGGTTAGTCATTGAAGACCAATGGGATCATGGCAGT
TCTCATCCTTTGGCAAACATCTTAATCAATAGGGTTGAAAAGGATGTGCTGAGGCGATCT
CATTCAGTGGTATCAAGGAAGCAGGTTGACGTGTTGCCTCGAAGAGTTGCATCAGACTCA
AGAAATGGCGATAGCAACAAACACAACAATGTCAATGGCATGGTTTCTGGGGCCAGTATC
ATTGGTGGCATCCACAAGGCTGTGTTTGATAAGGATTTCCCTTCACTTGGAACTGAACCT
GATATTGGAAGAGTTCCATCACCTGGGTTGAGCATGGCTGTTCAGAGTTTGCCCATTGGT
AATTCATCTTTGATTGGTGGGGAGGGATGGACTTCAGCTCTGGCAGAGGTGCCCATGATA
ACTGGAAGCAATAGCACAGGATCCTCATCTGTTCAACAGACTGTTGTTTCTGCTCCAGCA
TCTGGGCTTCCAAGTACTACAGCTGGTCTTAATATGGCTGAAGCATTGGCACAGGCCCCA
TCACGGGCTCGCACTACACCACAGCTATCTGTTAACACACAGCGACTTGAGGAATTGGCA
ATTAAGCAATCTAGGCAACTAATACCTGTGACACCTTCAATGCCTAAATCTTCGGTTCTC
AATTCTTCTGATAAATCAAAGCCCAAAACTGTAGTCAGAACCAGTGACATGATTGCTGCT
TCCAAGACTGGGCAGCAGCAGCCCTCTTCATCACACCTTGCTAACCATTCTCTTCGAGGA
CATGTGAGATCTGATCCTCCAACAACATCTCATGGGAAGTTTCTTGTTCTCAAACCAGCA
CGAGAGAATGGTGCCTCTCCTACATCAAGGGATGTTTCCAGTCCAACAAATAATGCTAGC
AGCCGAGTAGCAAGCATTCAGCTTGGTGTTGCTCATTCAGTTGCATCTGCTCCTTCGATT
AGTCCAAACTACCCAAAGCTTTCTACCATGGAGCGCAAGGCAGCTGCTTTGTCTCTGAAT
TCTGGACCTACCGCAGAAAAGAGACCTTCCTTTTCTCAAGCCCAGAGCCGTCATGATTTT
TTCAATTTGATGAGGAAGAAAACCTCTGTGAACAGTTCTGCTGTGCTCCCAGATTCAGGC
CCTGCGATTTCATCTTCCAACACAGAGAGTGAAGTGTCCAGTGCTCCTGTGAAATCTCAT
GCTATTGAGAATGGTGGCCAGGTAACTGGCAATGGTGGCAACACCTGTGAGGAGGTTGAG
AGTCCTGCTGTTGGAGAGAAGCATTTGGGTACCAATGCATCAATTTGTCCGGATGAGGAA
GAGGCTGCATTCCTAAGGTCCCTTGGGTGGGAGGAAAGTGCTGGAGATGATGAAGGCCTT
ACAGAAGAGGAGATAAATGCTTTCTATCAGGAGTATATGAAATTGAAGCCATCTTTGAAA
CTGCAGCAAGGCATGCAAGCAAAGCTTTTGATGCTGCATGGATCTCGTACAACTAGTTTG
GGTGGAGCTTCTTCCAAATTGAGCTCATCTGACTCAGAATCTGAAGCTTGA

Peptide Sequence

PEP ID

VIT_18s0001g03990.t01
PEP Infomation

pep chromosome:12X:18:3638981:3646405:1 gene:VIT_18s0001g03990 transcript:VIT_18s0001g03990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERSEPTLVPEWLRSTGSVTGGGNSAHHFATSSSHTDISPRSTRNRSSKNTSDYESPRSA
FLDRTSSSNSRRNLVSNGFPKHDKESNARAYSSFSRSHRDKDRDREKDRLVIEDQWDHGS
SHPLANILINRVEKDVLRRSHSVVSRKQVDVLPRRVASDSRNGDSNKHNNVNGMVSGASI
IGGIHKAVFDKDFPSLGTEPDIGRVPSPGLSMAVQSLPIGNSSLIGGEGWTSALAEVPMI
TGSNSTGSSSVQQTVVSAPASGLPSTTAGLNMAEALAQAPSRARTTPQLSVNTQRLEELA
IKQSRQLIPVTPSMPKSSVLNSSDKSKPKTVVRTSDMIAASKTGQQQPSSSHLANHSLRG
HVRSDPPTTSHGKFLVLKPARENGASPTSRDVSSPTNNASSRVASIQLGVAHSVASAPSI
SPNYPKLSTMERKAAALSLNSGPTAEKRPSFSQAQSRHDFFNLMRKKTSVNSSAVLPDSG
PAISSSNTESEVSSAPVKSHAIENGGQVTGNGGNTCEEVESPAVGEKHLGTNASICPDEE
EAAFLRSLGWEESAGDDEGLTEEEINAFYQEYMKLKPSLKLQQGMQAKLLMLHGSRTTSL
GGASSKLSSSDSESEA

Transcript Sequence

Transcript ID

VIT_18s0001g03990.t01
Transcript Infomation

cdna chromosome:12X:18:3638981:3646405:1 gene:VIT_18s0001g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATAAAACTAGGGTTAGGGTTATGCATCATTAACATTGGGTGGAAGCCCAGTGATTTTG
TAGAGAAAGGGGTGGAGAGAGTAAAGAAAGATAAGTAGTGTTTTTCTTTTATATCTGATG
ATGTGCAACACTCCTTATGGAAAGAAGTGAACCCACGTTAGTTCCAGAATGGTTGAGAAG
TACTGGAAGTGTTACTGGGGGTGGCAACTCAGCCCACCATTTTGCTACATCATCTTCGCA
CACAGATATTTCTCCACGCTCCACAAGAAATAGATCTTCTAAGAATACAAGTGATTATGA
AAGCCCTCGTTCGGCATTTTTAGACCGGACCTCCTCATCCAATTCACGGAGGAATTTGGT
CAGTAATGGTTTTCCAAAGCATGACAAGGAATCTAATGCTCGCGCATATAGTAGTTTCTC
CAGAAGTCACCGTGATAAGGACCGTGATAGGGAGAAAGATAGGTTAGTCATTGAAGACCA
ATGGGATCATGGCAGTTCTCATCCTTTGGCAAACATCTTAATCAATAGGGTTGAAAAGGA
TGTGCTGAGGCGATCTCATTCAGTGGTATCAAGGAAGCAGGTTGACGTGTTGCCTCGAAG
AGTTGCATCAGACTCAAGAAATGGCGATAGCAACAAACACAACAATGTCAATGGCATGGT
TTCTGGGGCCAGTATCATTGGTGGCATCCACAAGGCTGTGTTTGATAAGGATTTCCCTTC
ACTTGGAACTGAACCTGATATTGGAAGAGTTCCATCACCTGGGTTGAGCATGGCTGTTCA
GAGTTTGCCCATTGGTAATTCATCTTTGATTGGTGGGGAGGGATGGACTTCAGCTCTGGC
AGAGGTGCCCATGATAACTGGAAGCAATAGCACAGGATCCTCATCTGTTCAACAGACTGT
TGTTTCTGCTCCAGCATCTGGGCTTCCAAGTACTACAGCTGGTCTTAATATGGCTGAAGC
ATTGGCACAGGCCCCATCACGGGCTCGCACTACACCACAGCTATCTGTTAACACACAGCG
ACTTGAGGAATTGGCAATTAAGCAATCTAGGCAACTAATACCTGTGACACCTTCAATGCC
TAAATCTTCGGTTCTCAATTCTTCTGATAAATCAAAGCCCAAAACTGTAGTCAGAACCAG
TGACATGATTGCTGCTTCCAAGACTGGGCAGCAGCAGCCCTCTTCATCACACCTTGCTAA
CCATTCTCTTCGAGGACATGTGAGATCTGATCCTCCAACAACATCTCATGGGAAGTTTCT
TGTTCTCAAACCAGCACGAGAGAATGGTGCCTCTCCTACATCAAGGGATGTTTCCAGTCC
AACAAATAATGCTAGCAGCCGAGTAGCAAGCATTCAGCTTGGTGTTGCTCATTCAGTTGC
ATCTGCTCCTTCGATTAGTCCAAACTACCCAAAGCTTTCTACCATGGAGCGCAAGGCAGC
TGCTTTGTCTCTGAATTCTGGACCTACCGCAGAAAAGAGACCTTCCTTTTCTCAAGCCCA
GAGCCGTCATGATTTTTTCAATTTGATGAGGAAGAAAACCTCTGTGAACAGTTCTGCTGT
GCTCCCAGATTCAGGCCCTGCGATTTCATCTTCCAACACAGAGAGTGAAGTGTCCAGTGC
TCCTGTGAAATCTCATGCTATTGAGAATGGTGGCCAGGTAACTGGCAATGGTGGCAACAC
CTGTGAGGAGGTTGAGAGTCCTGCTGTTGGAGAGAAGCATTTGGGTACCAATGCATCAAT
TTGTCCGGATGAGGAAGAGGCTGCATTCCTAAGGTCCCTTGGGTGGGAGGAAAGTGCTGG
AGATGATGAAGGCCTTACAGAAGAGGAGATAAATGCTTTCTATCAGGAGTATATGAAATT
GAAGCCATCTTTGAAACTGCAGCAAGGCATGCAAGCAAAGCTTTTGATGCTGCATGGATC
TCGTACAACTAGTTTGGGTGGAGCTTCTTCCAAATTGAGCTCATCTGACTCAGAATCTGA
AGCTTGATTTACCAGTCCTTAACATGCTGGATCTGAGAAGTTCCAATTTTTGAAGGCGAT
TGGTTTGTTTCTTTTTTTCTTTTCCTGGTCCTTTTATTTTGAAGGAAAAGTGATGAGTTG
GGTATGGAAAAAGAGGGTGGGTTTGGTTGAACTCTGCATTTTGCAGTGAAATAAATTACA
GGTATTTTACACCCGCCTGTCTGCCTGCCCAAGATGGGATTTTCTGAGGTTAATGAGGTT
GGTTGGGAGATGGTTGGATTGGTGATATTTTGGTCCACAGTGGAAGATTCTTGCAAAATT
GCATCTTTAGAGATAATTTTCTTCTTTTCTTTTTCTTTCTAGAGGGTTCAATTCAACAGG
AAAAAGCTTATGATGTTTTTGATCAATTTTACGGGGAAAAAGAAATCAAAAGTTTTTATT
TTTAGTTTACTACATTCTGTTACTTATATTACTGTTTTACATTTGGCTTTATTTGATTTT
GTATAGAGTAGTTCATGTTGATAGCTGAAGGCACTAATCTGGCACAAATAAGAAGGAAAT
GTAAGAAATTTAGTTCACAAATTAACTCTCTGTAATAGCATTGCATATCTGCTTT