Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03960.t01
CDS Infomation

cds chromosome:12X:18:3596240:3606771:-1 gene:VIT_18s0001g03960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATCACCTGCCTCGACTCTTCGATTATAGCAAGAGATCCAAAGGGATGTTTCCAAAG
CAGAAGCCACGGAAGCCCAAGCTCGAGCGTCGCAATGCCTTGAGGCACATCGACTACGAC
GCCTCCGCTTCGTCGTCGTCGTCGTCGTTCGATGACTCCTTGGCTCTCCATACTCAATCG
TTGGATCTGTCGGACCGAAGCAGCTTCCGAATTCATGGAACAGAAGGGGAAGTTGACGAG
ATTTGCCGGAGTTTAGGGCTTTCGGGACCGGACGAATTATCGATTCCGGAGGCGGCGTGG
GAGGCGTGGAAGGTTCGATCGAATTCGGATGTTTTGCCGAGGACGAGATTTAACAGATTG
CATAGTTCCAAGAGAAAGGAATCGGAAGTGAAGGTGGATGATGGGGTGGTAGATGATTTG
GCAGATGGGTTTGAGGATAGTGTTAGCTGTAGTGATGCAATCGGGAGACGGAGAGAGACT
TCCGAGCTGAGTAGTTCTAGGATTGTTGGTGGTGTTGGCGGCTGTGGCGGAGGAATTAAG
GGTGTTAGGCCTCCTTTTCTTTCACCGCCGCCTTTAATGTCGCTTCCTGTGATTAGTGAC
GGGTGTTCCACTTGGGATATTTTGAAATCTTTTGGGCCGGATGCTGATGGGGGTTCTTCT
GTTGTGGTAGAAGGAGGGTCTAGTTCCGAGGACGACGAATTTGATGCGGCACTTGTTAAG
GGAGAGGACGTGAATGGGTTGAGGAACGACGAGATTGCTCTTCTATCCGAGTCATATTCA
TTTACCACGACGTCCAATGATGATGACTCCTCAAGCACTACCACGGAGCCCATGTCAAAC
ATCTCGCCAAATGGCAGCTTGAGACCCAGTTTCACAAATTGGATGAAGGGTGCGTTTCTG
GGAAGTGGATCCTTTGGAACGGTGTATGAAGGGATGTCCGAGGATGGAATATTTTTTGCT
GTAAAGGAAGTTTCATTGCTTGATCAAGGAAGCCAGGGCAAGCAAAGTCTTTACCAACTT
GAGCAGGAAATTGATCTTTTAAGTCAATTTCAACATGAGAACATAGTTCAATATCATGGC
ACAGCTAAGGATGAATCAAAGCTCTATATCTTTCTTGAACTTGTAACTAAAGGATCACTT
GCAAGTCTCTATCAGAGATATAATCTTGGAGATTCCCAAGCCTCAGCATACACAAGACAA
ATTCTGCATGGTTTGAATTATCTTCATGAGCGAAATGTGATTCACAGGGACATCAAATGT
GCAAACATATTGGTGGGTGCCAATGGGTCTGTGAAACTTTCAGATTTTGGGTTGGCAAAG
GCAACCCAATTGAATGATGCTAAATCTTGCAAGGGAACTCCATTCTGGATGGCCCCTGAG
GTTGTCAATGGGAAGGGCCAAGGGTACGGGCTTGCAGCTGATATTTGGAGCCTCGGGTGC
ACCGTGTTAGAAATGCTAACCCGTGAGGTTCCATACTCTCATTTGGAATCTATGCAGGCT
TTGTTTAGGATTGGAAAGGGTGAGCCACCACCTGTTCCTGACTCTCTCTCCCCAGATGCA
CGGGATTTTATCCTGAAATGCCTTCAAGTTATTCCAGATGATCGTCCCACAGCAGCTCAG
CTCTTAAACCATCAATTTGTGAAGAGGCCACCACCCACTTCTTCAGGCTCAGCATCGCCT
CTCTATCATGGAAGACGGTCTTAA

Peptide Sequence

PEP ID

VIT_18s0001g03960.t01
PEP Infomation

pep chromosome:12X:18:3596240:3606771:-1 gene:VIT_18s0001g03960 transcript:VIT_18s0001g03960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHHLPRLFDYSKRSKGMFPKQKPRKPKLERRNALRHIDYDASASSSSSSFDDSLALHTQS
LDLSDRSSFRIHGTEGEVDEICRSLGLSGPDELSIPEAAWEAWKVRSNSDVLPRTRFNRL
HSSKRKESEVKVDDGVVDDLADGFEDSVSCSDAIGRRRETSELSSSRIVGGVGGCGGGIK
GVRPPFLSPPPLMSLPVISDGCSTWDILKSFGPDADGGSSVVVEGGSSSEDDEFDAALVK
GEDVNGLRNDEIALLSESYSFTTTSNDDDSSSTTTEPMSNISPNGSLRPSFTNWMKGAFL
GSGSFGTVYEGMSEDGIFFAVKEVSLLDQGSQGKQSLYQLEQEIDLLSQFQHENIVQYHG
TAKDESKLYIFLELVTKGSLASLYQRYNLGDSQASAYTRQILHGLNYLHERNVIHRDIKC
ANILVGANGSVKLSDFGLAKATQLNDAKSCKGTPFWMAPEVVNGKGQGYGLAADIWSLGC
TVLEMLTREVPYSHLESMQALFRIGKGEPPPVPDSLSPDARDFILKCLQVIPDDRPTAAQ
LLNHQFVKRPPPTSSGSASPLYHGRRS

Transcript Sequence

Transcript ID

VIT_18s0001g03960.t01
Transcript Infomation

cdna chromosome:12X:18:3596240:3606771:-1 gene:VIT_18s0001g03960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTCCATGTTTCACCATTGGCGACGGCCTTTACCAGTCTTCGCCATAGTCTCTCACTCT
CTCTCCTTTCAACCATTTCGACTCTACTTGGTCAGATATTTTCTTCCGCACCAAAGTCCT
CTCCCTCCGAGCACATCTTGCTCGAATTTTCTTGGCTACTGATTGTTCCATCTTCAAGTC
GCAGAGAGATAATTCTCTTGTTATTTGATTTTTTATTTTCTTTTTAATTTCTATTTTATT
AGGATTCCTTTTGGAAGGTTAGAATCTTAGAGAAACGGGAGCACATGGTACTTGGATTTC
TGTGATTAAATTCATGTGAATACAGTTAAGAGGGAGAAAACAGGGAGGGAGAGCTTCTTG
TATCTTTTTTTTCCAATATTTTTTTGCGGGGTTTCAGTCTCTACAAAAACCCTAGTTTGG
ACGTTAATGGGTCGAGAATGAAATGCATCACCTGCCTCGACTCTTCGATTATAGCAAGAG
ATCCAAAGGGATGTTTCCAAAGCAGAAGCCACGGAAGCCCAAGCTCGAGCGTCGCAATGC
CTTGAGGCACATCGACTACGACGCCTCCGCTTCGTCGTCGTCGTCGTCGTTCGATGACTC
CTTGGCTCTCCATACTCAATCGTTGGATCTGTCGGACCGAAGCAGCTTCCGAATTCATGG
AACAGAAGGGGAAGTTGACGAGATTTGCCGGAGTTTAGGGCTTTCGGGACCGGACGAATT
ATCGATTCCGGAGGCGGCGTGGGAGGCGTGGAAGGTTCGATCGAATTCGGATGTTTTGCC
GAGGACGAGATTTAACAGATTGCATAGTTCCAAGAGAAAGGAATCGGAAGTGAAGGTGGA
TGATGGGGTGGTAGATGATTTGGCAGATGGGTTTGAGGATAGTGTTAGCTGTAGTGATGC
AATCGGGAGACGGAGAGAGACTTCCGAGCTGAGTAGTTCTAGGATTGTTGGTGGTGTTGG
CGGCTGTGGCGGAGGAATTAAGGGTGTTAGGCCTCCTTTTCTTTCACCGCCGCCTTTAAT
GTCGCTTCCTGTGATTAGTGACGGGTGTTCCACTTGGGATATTTTGAAATCTTTTGGGCC
GGATGCTGATGGGGGTTCTTCTGTTGTGGTAGAAGGAGGGTCTAGTTCCGAGGACGACGA
ATTTGATGCGGCACTTGTTAAGGGAGAGGACGTGAATGGGTTGAGGAACGACGAGATTGC
TCTTCTATCCGAGTCATATTCATTTACCACGACGTCCAATGATGATGACTCCTCAAGCAC
TACCACGGAGCCCATGTCAAACATCTCGCCAAATGGCAGCTTGAGACCCAGTTTCACAAA
TTGGATGAAGGGTGCGTTTCTGGGAAGTGGATCCTTTGGAACGGTGTATGAAGGGATGTC
CGAGGATGGAATATTTTTTGCTGTAAAGGAAGTTTCATTGCTTGATCAAGGAAGCCAGGG
CAAGCAAAGTCTTTACCAACTTGAGCAGGAAATTGATCTTTTAAGTCAATTTCAACATGA
GAACATAGTTCAATATCATGGCACAGCTAAGGATGAATCAAAGCTCTATATCTTTCTTGA
ACTTGTAACTAAAGGATCACTTGCAAGTCTCTATCAGAGATATAATCTTGGAGATTCCCA
AGCCTCAGCATACACAAGACAAATTCTGCATGGTTTGAATTATCTTCATGAGCGAAATGT
GATTCACAGGGACATCAAATGTGCAAACATATTGGTGGGTGCCAATGGGTCTGTGAAACT
TTCAGATTTTGGGTTGGCAAAGGCAACCCAATTGAATGATGCTAAATCTTGCAAGGGAAC
TCCATTCTGGATGGCCCCTGAGGTTGTCAATGGGAAGGGCCAAGGGTACGGGCTTGCAGC
TGATATTTGGAGCCTCGGGTGCACCGTGTTAGAAATGCTAACCCGTGAGGTTCCATACTC
TCATTTGGAATCTATGCAGGCTTTGTTTAGGATTGGAAAGGGTGAGCCACCACCTGTTCC
TGACTCTCTCTCCCCAGATGCACGGGATTTTATCCTGAAATGCCTTCAAGTTATTCCAGA
TGATCGTCCCACAGCAGCTCAGCTCTTAAACCATCAATTTGTGAAGAGGCCACCACCCAC
TTCTTCAGGCTCAGCATCGCCTCTCTATCATGGAAGACGGTCTTAA