Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03950.t01
CDS Infomation

cds chromosome:12X:18:3587990:3596239:-1 gene:VIT_18s0001g03950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATATATGTTACGTTACTTCCTGAAGGGTGGAACCCCACACCCCTAACCCACCACCCT
TACGCAACCATCGTTCGTCCTTCCTTTCTCTCTCCCTCTCTTCTTTCTTCCTCTTCGCTC
CCAGCCCTACCGGATTCACCTGATTTTAAATTTCAAACCCTAGCCATCTTTGCCGCAAGA
CAGTTTGACTTGAAAATGGCAAGGGTTAACAAAGTGAGACGAAAGGCTAATTCCCGACTT
CACAGGGCAACCCCATTCCCATTATCATCTCACCCTCGCAAGGTTCTGAAAGATGTTCAT
CTGAAGAAGAAACACTCTAAAGCATTGGCAAAAAAAGACTGGGAAGATGCAACCTGCTCA
GTTTGTATGGAGTTCCCTCACAATGCTGTACTACTCCTTTGCTCCTCCTATGAGAAAGGT
TGCCGCCCTTACATGTGTGCTACTAGTTGTCGTTACTCCAACTGTCTTGATCAGTACAAG
AAAGCCTATACTAAAGTTACTTCAACCGAAAGTTCACCACAATCACAAGGTTCAACTGAG
AATTTAAGTCTTGGTTCTCATTCAGGTCTTCCTAATGAAAAGATGGAAGTGTCAGAGCTT
CTGTGTCCACTCTGCCGAGGACAGGTGAAAGGTTGGACAGTGGTGGAACCAGCACGTAAG
TATCTCAATGCCAAGAAGAGAACATGCATGCAGGATAACTGCTCATATGTTGGAACATAC
AAACAACTCAGGAAGCATGTTAGAGCAGAGCACCCACTGGCACGACCTCGTGAAGTGGAC
CCTTCACTTGAAGAGAAATGGAAGAGGCTTGAAGGTGAAAGAGAACGGAATGATGTGCTC
AGTACAATTAGATCATCAATGCCAGGTGCATTGATTCTGGGGGATTATGTGATAGAGGGT
AACTATCATGGGTTTTATAGAGATTATGCTGAGTATGATGCAGAAGCATATTTTGATGAT
GCTCTTTTCTCTTTGGATTCTTTTGGTAGAGGGCGGAGGGGAGGTATCCACTTGGGTAGC
AGATTTAACAGAACATATGATTTATTGGATGAGGAAGACCATGAGATGCGTCGCCATGTG
GCTGCACCTGGACGTGGTCTCCACAGGTTGCTGTATGGGAGGTCAAGAAGGCGACAAAGG
CACAGAGAAGCTAATGGAGAACGTTAA

Peptide Sequence

PEP ID

VIT_18s0001g03950.t01
PEP Infomation

pep chromosome:12X:18:3587990:3596239:-1 gene:VIT_18s0001g03950 transcript:VIT_18s0001g03950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIYVTLLPEGWNPTPLTHHPYATIVRPSFLSPSLLSSSSLPALPDSPDFKFQTLAIFAAR
QFDLKMARVNKVRRKANSRLHRATPFPLSSHPRKVLKDVHLKKKHSKALAKKDWEDATCS
VCMEFPHNAVLLLCSSYEKGCRPYMCATSCRYSNCLDQYKKAYTKVTSTESSPQSQGSTE
NLSLGSHSGLPNEKMEVSELLCPLCRGQVKGWTVVEPARKYLNAKKRTCMQDNCSYVGTY
KQLRKHVRAEHPLARPREVDPSLEEKWKRLEGERERNDVLSTIRSSMPGALILGDYVIEG
NYHGFYRDYAEYDAEAYFDDALFSLDSFGRGRRGGIHLGSRFNRTYDLLDEEDHEMRRHV
AAPGRGLHRLLYGRSRRRQRHREANGER

Transcript Sequence

Transcript ID

VIT_18s0001g03950.t01
Transcript Infomation

cdna chromosome:12X:18:3587990:3596239:-1 gene:VIT_18s0001g03950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTTTTCTTCGGTTTGAACAGTAAATATAATGAGCTCCATCCATAAATATGGAGAAACCT
TCATGTGGATCATCGACATTTTCTTCCACGGTACACACTCAAAGGCATCAGGTTCTTTGA
ACTGGAATGATCCTGAAGCGTTTCAAGGATTTGATATTTACTCATAACTGGGGGAGTGAA
CAAGCATTCTTTGATGACGGTGCCCCTCTCCAAAATTCTCCACACTAGAGAGCAAACTGC
ATTCGAATTGCCAGTCATGGGAAATTTATTGTTTGGCAGCAACAGTTTGGTGTCTAATAT
TGAGAGACTGTTTTCCTTCACATTGTATTTGTATATATATTTATTTTTATAGATGTAATA
TTCTTTTTGTTTTTTGAAAGAAGAGTCTTATATTAGGTGTTTGTATATACCTACATATTT
GACCCTAAAAAAAAATAATTCTGAGTTAATAATATTTAGATGTTGGTTAACGAATGATAT
ATGTTACGTTACTTCCTGAAGGGTGGAACCCCACACCCCTAACCCACCACCCTTACGCAA
CCATCGTTCGTCCTTCCTTTCTCTCTCCCTCTCTTCTTTCTTCCTCTTCGCTCCCAGCCC
TACCGGATTCACCTGATTTTAAATTTCAAACCCTAGCCATCTTTGCCGCAAGACAGTTTG
ACTTGAAAATGGCAAGGGTTAACAAAGTGAGACGAAAGGCTAATTCCCGACTTCACAGGG
CAACCCCATTCCCATTATCATCTCACCCTCGCAAGGTTCTGAAAGATGTTCATCTGAAGA
AGAAACACTCTAAAGCATTGGCAAAAAAAGACTGGGAAGATGCAACCTGCTCAGTTTGTA
TGGAGTTCCCTCACAATGCTGTACTACTCCTTTGCTCCTCCTATGAGAAAGGTTGCCGCC
CTTACATGTGTGCTACTAGTTGTCGTTACTCCAACTGTCTTGATCAGTACAAGAAAGCCT
ATACTAAAGTTACTTCAACCGAAAGTTCACCACAATCACAAGGTTCAACTGAGAATTTAA
GTCTTGGTTCTCATTCAGGTCTTCCTAATGAAAAGATGGAAGTGTCAGAGCTTCTGTGTC
CACTCTGCCGAGGACAGGTGAAAGGTTGGACAGTGGTGGAACCAGCACGTAAGTATCTCA
ATGCCAAGAAGAGAACATGCATGCAGGATAACTGCTCATATGTTGGAACATACAAACAAC
TCAGGAAGCATGTTAGAGCAGAGCACCCACTGGCACGACCTCGTGAAGTGGACCCTTCAC
TTGAAGAGAAATGGAAGAGGCTTGAAGGTGAAAGAGAACGGAATGATGTGCTCAGTACAA
TTAGATCATCAATGCCAGGTGCATTGATTCTGGGGGATTATGTGATAGAGGGTAACTATC
ATGGGTTTTATAGAGATTATGCTGAGTATGATGCAGAAGCATATTTTGATGATGCTCTTT
TCTCTTTGGATTCTTTTGGTAGAGGGCGGAGGGGAGGTATCCACTTGGGTAGCAGATTTA
ACAGAACATATGATTTATTGGATGAGGAAGACCATGAGATGCGTCGCCATGTGGCTGCAC
CTGGACGTGGTCTCCACAGGTTGCTGTATGGGAGGTCAAGAAGGCGACAAAGGCACAGAG
AAGCTAATGGAGAACGTTAATATATGTGCTGTGTGCTGAACAAGGGGAAGAAAAGGGGAG
GGGGCTGGGTGGTGTTGTGGTTGTGGTGGTGGGGTTTTGATTTGCTTCTGGCAGTTGGTT
ACGGTAGTTAGCTTTTTGTTTTGGGTTGGATTTGGTTTTAGTAGGGTTTGGGTTTGGGTG
ATGAAGGACTGGCCTCCTGCTCTTCTACAATTGAATTTTTTTACTTTTCTGTGATTTCAT
CGCATGGGCACCATATAGTAATGGTCCACGAGGACATAGCCATCATTTCATTGGACAATT
ATAGTAGAGGAATTGCAGAATCGGTAGCAGCAGATTATCGAGTTGTGTGGCACCCAGGTA
AGTATTCTCTTAGGGATAGTAAAATACCATTTTAGAGGGGCCTTGCCTCTGTTTAGGGGT
GGTGAACCAAGCTATTTTAATGGTTGGTTCCCACTAGGATCTGACTCTCATTTGATTATG
CAGAGTGGTCATTTGAACAGGATAGACTGTGGTAAAAGAAAAAAAAAAAAAAAAAATCTT
TTTTTTCTCTTTCTTTGGGCTTTTCGGTTTAAGTTTCCCTTTCCCCTCTTGTTCCATGGG
TGGCCCTTGTTTCCCTAACAGTTTAATCCATGTACAGTTTGAAGGGTGGTTTGTGAAAAG
AATTTTATTTGCTAGTGATTGTAAAGTTGTGGGTGACTAACGGCTGAAAAAAGTGTGCCT
CTAAAACTAGGCCTTGATTATTTCCAGGTGCATTGACTCGAGCTAGTTTGCTTCTCCCCT
GAATTACTGAATCTGGTTCCCCTTAGTGTACACAGGTTTGTCTACGCTTCAGATCCGGTG
GAGTACAAAGTTTACTCTTGATTTTATTTTTCCAGCGGAAAACCTTGTTTGTGTATCCGG
GCGCCAGACCTTAATAATGGTTATATTTCTTGAAGCCAGCTTTTGTTTGAGGATTGTGAT
GTTATGTGGATTTCATGGAGCCAACATTTTC