Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03900.t01
CDS Infomation

cds chromosome:12X:18_random:3572096:3579471:-1 gene:VIT_18s0001g03900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATCTGTTGATTCTACTTTTGCCCCTCAATGGAAGTACGATGTCTTCTTGAGTTTT
AGAGGAGAAGACACCGGAAAAACTTTTACCGATCATCTCTATACAGCTTTGGATGAGAAT
GGATTTTATGCCTTCAGAGACGATGAAAAACATGAGAAACGGGAAGAAATTGCGCCAGAA
TTCTTGACAGCTATTGAAGAATCAAAGATTTCCATCCTTGTATTTTCGAAGAACTATGCT
TCTTCGAGGTGGTGTTTAGATGAGCTGGAAACCATAATTAAGTCTATGAAAAAACCGGGT
CGAATGGTTATGCCGGTGTTCTACCATGTTGATCCATCAGAAGTGCGAGATCAGATCGGA
AGTTGTGAAGTATTTTTGAGTCATGAAAGAGATGCCGAGGAGACGAAGGAGAAGGTGAAT
AGATGGAGGGCCGCCTTGAGGGAAGCATCCAATCTAGTGGGATGGCGTCTTCACAATCAG
TATGAGTCACAGCTTATCAAGGAAATTATCACTGATATTCTTAGAAGATTGAATTGTGAG
CTTCTGCAAGTTGATTATGACACAGTTGGAATGGAATTTCGTTTGAAAAAATTGTTGTCG
TTGATAAATCTTAAGTTGGATAAGGTTCTCATGATTGGGATAAATGGAATCAGTGGAATT
GGGAAGACTACCATTGCCAAGGCTATTTACAATAAAATCTCATATCATTTCCAGAGTACC
ATCTTTCTTACAAATGTTGGAGAGAATTCAAGAGGTCATCATCTCAATCTACCACAATTT
CAGCAGCTACTTGATGATGCATCAATAGGAACATATGGAAGAACAAAAAATAAAAGGGTT
CTTCTTGTTGTTGATGATGTTGATCGGTTGAGTCAAGTAGAATACTTAGTTAAATTACGT
GATTCGTTTAGCCTCCGAAGTAGAATTATCTTTACAACTAGAGATAGACATTTGCTAAAT
GTGGCTAAATTAGATGCATCATATGAATCTAAAGGATTAACTCATGAGGAAGCTATTCAC
CTCTTCAGTTGGCATGCCTTTAAACAAACCTTTCCAAAAGAAGATTATGTGGGCCTTGTG
AACCATGTTGTAGGATATGTTAAGGGTCATCCTTTAGCTCTTAAAGTGTTGGGTTCTTCT
CTTTTTGGCAAGACAATAACCGAATGGAAATGCATATTGCATAAACTAAGAAAAAACACT
CATGGCGAAATTTACAATGAATTAAAAGTAAGTTTTGATGGACTAACTCCTACAGAGCAG
GAGATTTTTCTTAAGGTTGTATGCCTTTTAAAGGGGAAAGATGAGGAATCTGTTTCAACA
ATACTTGACAGTCTTGGGTTGGGCTCAGAAAGTGGAATTCAAGTTCTTCATGATATGTGT
CTTGCAACAATTTCAAACAATAAGTTATACATGCATGATTTATTACAACAAATGGGTCAA
AAACTTATTGATGAAAATAATCCCCATGAGCCTAGTAAAAGGAGCAGATTGCAGGACTCC
AAGGATGTGTATCCTCGATTGACAAGGAATACGGGGACAGAAGAAATTCAAAAGATACAG
TTCAGCAGTGCAGGTTTCCTGAAAATGCCCAAATTATATTCCCTAATGCATCTTCCTTTG
AAATCTTTGCCACCAAATTTTCCTGGAGATAGCCTTATTTTTCTTGACTGGAGTCGTAGC
AACATAAGACAGCTCTGGAAGGATGAGTATCCTCGATTGACAAGGAATACGGGGACAGAA
GCAATTCAAAAATTACTTTCCCCAATGCATCTTCCTTTGAAATCTTTGCCACCAAATTTT
CCTGGAGATAGCCTTATTTTACTCGACTTGAGTCGTAGCAACATAAGACAGCTCTGGAAG
GGGAATAAGAGTCTTGGAAACTTGAAGGTCATGAATCTCAGTTATTGTCAAAATCTCGTA
AAAATCTCAAAATTTCCATCTATGCCAGCATTGAAGATTCTAAGGCTTAAAGGGTGCAAA
AAGCTTAGGAGTCTTCCAAGTAGCATCTGTGAGTTGAAATGCCTTGAATGTCTCTGGTGC
TCTGGCTGTTCAAACCTAGAGGCGTTTCCAGAGATCACAGAAAAGATGGAAAATTTGAAA
GAGCTTCATTTGGATGAGACAGCTATAAAAGAGCTACCTTCATCAATTTACCATCTGACA
GCACTTGAATTTTTGAATTTGGAACATTGCAAAAACCTTGTAGTATTAGTAAGTTGCAAC
ACCTCAAAAGTCTCTGTCACACTCACTGTTGAAACCTAG

Peptide Sequence

PEP ID

VIT_18s0001g03900.t01
PEP Infomation

pep chromosome:12X:18_random:3572096:3579471:-1 gene:VIT_18s0001g03900 transcript:VIT_18s0001g03900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASVDSTFAPQWKYDVFLSFRGEDTGKTFTDHLYTALDENGFYAFRDDEKHEKREEIAPE
FLTAIEESKISILVFSKNYASSRWCLDELETIIKSMKKPGRMVMPVFYHVDPSEVRDQIG
SCEVFLSHERDAEETKEKVNRWRAALREASNLVGWRLHNQYESQLIKEIITDILRRLNCE
LLQVDYDTVGMEFRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKISYHFQST
IFLTNVGENSRGHHLNLPQFQQLLDDASIGTYGRTKNKRVLLVVDDVDRLSQVEYLVKLR
DSFSLRSRIIFTTRDRHLLNVAKLDASYESKGLTHEEAIHLFSWHAFKQTFPKEDYVGLV
NHVVGYVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEIYNELKVSFDGLTPTEQ
EIFLKVVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATISNNKLYMHDLLQQMGQ
KLIDENNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQKIQFSSAGFLKMPKLYSLMHLPL
KSLPPNFPGDSLIFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQKLLSPMHLPLKSLPPNF
PGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMPALKILRLKGCK
KLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELPSSIYHLT
ALEFLNLEHCKNLVVLVSCNTSKVSVTLTVET

Transcript Sequence

Transcript ID

VIT_18s0001g03900.t01
Transcript Infomation

cdna chromosome:12X:18_random:3572096:3579471:-1 gene:VIT_18s0001g03900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATCTGTTGATTCTACTTTTGCCCCTCAATGGAAGTACGATGTCTTCTTGAGTTTT
AGAGGAGAAGACACCGGAAAAACTTTTACCGATCATCTCTATACAGCTTTGGATGAGAAT
GGATTTTATGCCTTCAGAGACGATGAAAAACATGAGAAACGGGAAGAAATTGCGCCAGAA
TTCTTGACAGCTATTGAAGAATCAAAGATTTCCATCCTTGTATTTTCGAAGAACTATGCT
TCTTCGAGGTGGTGTTTAGATGAGCTGGAAACCATAATTAAGTCTATGAAAAAACCGGGT
CGAATGGTTATGCCGGTGTTCTACCATGTTGATCCATCAGAAGTGCGAGATCAGATCGGA
AGTTGTGAAGTATTTTTGAGTCATGAAAGAGATGCCGAGGAGACGAAGGAGAAGGTGAAT
AGATGGAGGGCCGCCTTGAGGGAAGCATCCAATCTAGTGGGATGGCGTCTTCACAATCAG
TATGAGTCACAGCTTATCAAGGAAATTATCACTGATATTCTTAGAAGATTGAATTGTGAG
CTTCTGCAAGTTGATTATGACACAGTTGGAATGGAATTTCGTTTGAAAAAATTGTTGTCG
TTGATAAATCTTAAGTTGGATAAGGTTCTCATGATTGGGATAAATGGAATCAGTGGAATT
GGGAAGACTACCATTGCCAAGGCTATTTACAATAAAATCTCATATCATTTCCAGAGTACC
ATCTTTCTTACAAATGTTGGAGAGAATTCAAGAGGTCATCATCTCAATCTACCACAATTT
CAGCAGCTACTTGATGATGCATCAATAGGAACATATGGAAGAACAAAAAATAAAAGGGTT
CTTCTTGTTGTTGATGATGTTGATCGGTTGAGTCAAGTAGAATACTTAGTTAAATTACGT
GATTCGTTTAGCCTCCGAAGTAGAATTATCTTTACAACTAGAGATAGACATTTGCTAAAT
GTGGCTAAATTAGATGCATCATATGAATCTAAAGGATTAACTCATGAGGAAGCTATTCAC
CTCTTCAGTTGGCATGCCTTTAAACAAACCTTTCCAAAAGAAGATTATGTGGGCCTTGTG
AACCATGTTGTAGGATATGTTAAGGGTCATCCTTTAGCTCTTAAAGTGTTGGGTTCTTCT
CTTTTTGGCAAGACAATAACCGAATGGAAATGCATATTGCATAAACTAAGAAAAAACACT
CATGGCGAAATTTACAATGAATTAAAAGTAAGTTTTGATGGACTAACTCCTACAGAGCAG
GAGATTTTTCTTAAGGTTGTATGCCTTTTAAAGGGGAAAGATGAGGAATCTGTTTCAACA
ATACTTGACAGTCTTGGGTTGGGCTCAGAAAGTGGAATTCAAGTTCTTCATGATATGTGT
CTTGCAACAATTTCAAACAATAAGTTATACATGCATGATTTATTACAACAAATGGGTCAA
AAACTTATTGATGAAAATAATCCCCATGAGCCTAGTAAAAGGAGCAGATTGCAGGACTCC
AAGGATGTGTATCCTCGATTGACAAGGAATACGGGGACAGAAGAAATTCAAAAGATACAG
TTCAGCAGTGCAGGTTTCCTGAAAATGCCCAAATTATATTCCCTAATGCATCTTCCTTTG
AAATCTTTGCCACCAAATTTTCCTGGAGATAGCCTTATTTTTCTTGACTGGAGTCGTAGC
AACATAAGACAGCTCTGGAAGGATGAGTATCCTCGATTGACAAGGAATACGGGGACAGAA
GCAATTCAAAAATTACTTTCCCCAATGCATCTTCCTTTGAAATCTTTGCCACCAAATTTT
CCTGGAGATAGCCTTATTTTACTCGACTTGAGTCGTAGCAACATAAGACAGCTCTGGAAG
GGGAATAAGAGTCTTGGAAACTTGAAGGTCATGAATCTCAGTTATTGTCAAAATCTCGTA
AAAATCTCAAAATTTCCATCTATGCCAGCATTGAAGATTCTAAGGCTTAAAGGGTGCAAA
AAGCTTAGGAGTCTTCCAAGTAGCATCTGTGAGTTGAAATGCCTTGAATGTCTCTGGTGC
TCTGGCTGTTCAAACCTAGAGGCGTTTCCAGAGATCACAGAAAAGATGGAAAATTTGAAA
GAGCTTCATTTGGATGAGACAGCTATAAAAGAGCTACCTTCATCAATTTACCATCTGACA
GCACTTGAATTTTTGAATTTGGAACATTGCAAAAACCTTGTAGTATTAGTAAGTTGCAAC
ACCTCAAAAGTCTCTGTCACACTCACTGTTGAAACCTAGGGAGGTTTCCAGAAATTACAG
GGAAGATGGAAATTTTGAAAAAGCTTTATTTGGATAAGATAACTATAGAAGAGTTACATG
CATCAATTGATATCTGGAAGGACAGTGATATCGGTTCTCATGGGACTCTTGGTATCAAAT
GCCGTTCAAAACGCAAACCTCTATTCTTTAAGAATACAACGAGCAATCTGGGGTGATTTG
TCTAAGATTCCTCAGTTTGAGCCTCTGCAAGAGGCTTCAAATCCTCCCAGAGCTTCCATC
AAGTAGAAACTGTGTAGATGCACACCACTGCATCTGCCTGAAGACTTTGTCGATTCCATC
ATTGTCACCATGGAGGAGGCAGTCACGGCCTTTTCTTTTCAATAACTTCAAATGGGAAAT
TCAGATATGATTTTCATGGAACACAACTATTAATCTAG