Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03730.t01
CDS Infomation

cds chromosome:12X:18:3445960:3490992:-1 gene:VIT_18s0001g03730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGATTTGCAAGCTGATCTCTCAGCTAATGGTTTAACCGTTTCCACCACCCCAGAG
AAAGGTCGATGTCTCTTATCGATCAAAGATTTCTCTCCAGGAGAGGTGATCATAAGCCAA
GAGCCTTATGTCTCTGTGCCAAACAACTCTGCAGTTCACTCAAGATGTGAGGGATGTTTC
AGATCAAGCAATCTTAAAAAGTGCTCGGCTTGTCATGTTGTGTGGTACTGTGGGAGCACA
TGCCAGAAGTCAGACTGGAAGTTGCACCGTCTTGAATGCAATGCATTGTCAAGGCTTGAG
AAGGAAAGGCAAAAATCTCTTACACCTTCTATACGCCTGATGGTAAAGCTCTACATGCGG
AGAAAATTGCAAAGTGAGAAGATCATGCCAACTACTGCTAGAGACAACTACAACTTGGTG
GAGGCTTTGGTGTCCCACATAACTGACATTGATGAGAAGCAATTGGTGCTCTATGCACAA
ATGGCTAACCTTGTCAACCTGATACTTCAGTGGCCTGATATTAACGTAAAAGAAATTGCA
GAAAACTTTTCTAAGCTTGCATGCAATGCTCATACCATTTGTGATGGTGAACTAAGACCG
CTTGGTACTGGACTATATCCTGTCATTTCAATTATTAACCACAGCTGCTTGCCCAACTCT
GTTTTGGTATTTGAGGAAAGGTTAGCAGTGGTCCGTGCTGTGCAACATATTCCCAAAGGT
ACTGAGGTATTAATAAGCTACATAGAAACTGCTGGAAGCACTATAACCCGACAAAAGGCT
CTTAAAGAACAATACCTTTTCACTTGCACGTGTCCTCGCTGTAGAAGAATGGGCCAGTAT
GATGATATCCAAGAAAGTGCAATTCTGGAAGGGTACAGATGCAAGGATGATAGATGTGAT
GGTTTTTTGCTTCGTGATTCTGATGACATAGGCTTTATATGTCAACAATGTGGTCTTGTT
AGGAACAAAGAGGAGATAAAAAGGCTTGCAAGCGAACTAAAACCACTGTCAGATAAGGCT
ACTATGTCTTCATCTTCCCATTATGTAGAAGCTACTTCAATCTATAAGATGATTGAGAAG
CTTCAAACAAAATTGTTTCATCCTTTTTCGATCAATTTGATGCGAACCCGTGAAGCTATT
TTGAAGATTTTGATGGAGATGAAAGATTGGAGAGCAGCATTAACATATTGCAAATTAACC
ATTCCAGTGTATCAAAGAGTTTATCCAGGATTCCACCCTTTGCTTGGGCTGCAATATTAT
ACGTGCGGGAAACTTGAATGGTTACTTGGGGAAACAGAGGATGCTGTCAAATCGCTCACT
AAGGCAGCAGATATACTGCAAATTACTCATGGTACAAATACACCCTTTATGAAGGAGCTC
CTGTTCAAGTTGGAGGAAGCACGTGCTGAAGCATCTCACAAACGATCATCTAAAGACAAG
TAG

Peptide Sequence

PEP ID

VIT_18s0001g03730.t01
PEP Infomation

pep chromosome:12X:18:3445960:3490992:-1 gene:VIT_18s0001g03730 transcript:VIT_18s0001g03730.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDLQADLSANGLTVSTTPEKGRCLLSIKDFSPGEVIISQEPYVSVPNNSAVHSRCEGCF
RSSNLKKCSACHVVWYCGSTCQKSDWKLHRLECNALSRLEKERQKSLTPSIRLMVKLYMR
RKLQSEKIMPTTARDNYNLVEALVSHITDIDEKQLVLYAQMANLVNLILQWPDINVKEIA
ENFSKLACNAHTICDGELRPLGTGLYPVISIINHSCLPNSVLVFEERLAVVRAVQHIPKG
TEVLISYIETAGSTITRQKALKEQYLFTCTCPRCRRMGQYDDIQESAILEGYRCKDDRCD
GFLLRDSDDIGFICQQCGLVRNKEEIKRLASELKPLSDKATMSSSSHYVEATSIYKMIEK
LQTKLFHPFSINLMRTREAILKILMEMKDWRAALTYCKLTIPVYQRVYPGFHPLLGLQYY
TCGKLEWLLGETEDAVKSLTKAADILQITHGTNTPFMKELLFKLEEARAEASHKRSSKDK

Transcript Sequence

Transcript ID

VIT_18s0001g03730.t01
Transcript Infomation

cdna chromosome:12X:18:3445960:3490992:-1 gene:VIT_18s0001g03730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATTACAGTAGAGGTTACTAGCGGAAGGGCGACTCTTCTCTACGATGGAGGATTTGCAA
GCTGATCTCTCAGCTAATGGTTTAACCGTTTCCACCACCCCAGAGAAAGGTCGATGTCTC
TTATCGATCAAAGATTTCTCTCCAGGAGAGGTGATCATAAGCCAAGAGCCTTATGTCTCT
GTGCCAAACAACTCTGCAGTTCACTCAAGATGTGAGGGATGTTTCAGATCAAGCAATCTT
AAAAAGTGCTCGGCTTGTCATGTTGTGTGGTACTGTGGGAGCACATGCCAGAAGTCAGAC
TGGAAGTTGCACCGTCTTGAATGCAATGCATTGTCAAGGCTTGAGAAGGAAAGGCAAAAA
TCTCTTACACCTTCTATACGCCTGATGGTAAAGCTCTACATGCGGAGAAAATTGCAAAGT
GAGAAGATCATGCCAACTACTGCTAGAGACAACTACAACTTGGTGGAGGCTTTGGTGTCC
CACATAACTGACATTGATGAGAAGCAATTGGTGCTCTATGCACAAATGGCTAACCTTGTC
AACCTGATACTTCAGTGGCCTGATATTAACGTAAAAGAAATTGCAGAAAACTTTTCTAAG
CTTGCATGCAATGCTCATACCATTTGTGATGGTGAACTAAGACCGCTTGGTACTGGACTA
TATCCTGTCATTTCAATTATTAACCACAGCTGCTTGCCCAACTCTGTTTTGGTATTTGAG
GAAAGGTTAGCAGTGGTCCGTGCTGTGCAACATATTCCCAAAGGTACTGAGGTATTAATA
AGCTACATAGAAACTGCTGGAAGCACTATAACCCGACAAAAGGCTCTTAAAGAACAATAC
CTTTTCACTTGCACGTGTCCTCGCTGTAGAAGAATGGGCCAGTATGATGATATCCAAGAA
AGTGCAATTCTGGAAGGGTACAGATGCAAGGATGATAGATGTGATGGTTTTTTGCTTCGT
GATTCTGATGACATAGGCTTTATATGTCAACAATGTGGTCTTGTTAGGAACAAAGAGGAG
ATAAAAAGGCTTGCAAGCGAACTAAAACCACTGTCAGATAAGGCTACTATGTCTTCATCT
TCCCATTATGTAGAAGCTACTTCAATCTATAAGATGATTGAGAAGCTTCAAACAAAATTG
TTTCATCCTTTTTCGATCAATTTGATGCGAACCCGTGAAGCTATTTTGAAGATTTTGATG
GAGATGAAAGATTGGAGAGCAGCATTAACATATTGCAAATTAACCATTCCAGTGTATCAA
AGAGTTTATCCAGGATTCCACCCTTTGCTTGGGCTGCAATATTATACGTGCGGGAAACTT
GAATGGTTACTTGGGGAAACAGAGGATGCTGTCAAATCGCTCACTAAGGCAGCAGATATA
CTGCAAATTACTCATGGTACAAATACACCCTTTATGAAGGAGCTCCTGTTCAAGTTGGAG
GAAGCACGTGCTGAAGCATCTCACAAACGATCATCTAAAGACAAGTAGAAAAATCCACCT
CCCAATCATATCTATACATGAGTAACTGCTATCAATGGTCCTGTACCTTTTTCCATCAAT
GACCCACACCATGGAGAAGACAAGAAGTAGCCTGCATACTGTTGCTGTTTGCTCATCACA
ACGATATCAATTATCTGTCATGCACACCATGCAGTTCATATCTGAAATTTATTTCAGAAT
GTAAATGGCCTCTCAATATGTTACTCTCAAAGACCTACCTCACCTAATGTCTAAAGAATG
CCTGTATCCGTTTCTAACATCAATTGTTGGATGAAAAATGGTTGCAGAGAACTGGTATTT
T