Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03680.t01
CDS Infomation

cds chromosome:12X:18:3433101:3445210:1 gene:VIT_18s0001g03680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGGGGAGGCTAACCTTCCGGCCCCATCTGCGTCTGCCAATAATCTCAGCCGTCCG
ATCCTGCCTGACTCCTATCAGAACCGTTCGATCACCTCGTCGTCATCGTCATCATCATCG
TCATCATCGTTCTATTCATCTTCTCCGCCGGACTTTCTCCGGCATGTCCAGGCTGCCTTC
AAGCGCCACCGTCCACTCGGTACAATGCAGTCTAATAGTATTATGCCAAGGCGTATATTG
GTTCCCCGGCGAGAAACCTCAAAGATCACTGCATCAAATGTGGTTCCCACAATAGATGCC
AAAAAATCTCAGGATGTGCGTCCTTCAATGCATCAGGGTAACACAGGGAAAGAGTTGGTT
GTGGAGATAAGGAACAAGGTATCTGTTGTTGGGGAAACTGAAGAAGATGCACCAATTACT
CCACCTTCAATTTCAGGCAGTATCACTAATGAAGATCTATATGATGTGCAACGAGTGCAA
TGCAAACCCGTTGCTGGATGCAAAAATACTGATGGGGTTTCATTTTCACATGTAGAATCT
CAGCATGTTCCAGTTGTTGATGGTCAGAAGAAGGTCCAGTTTTTGTTGGGGAAAAATGCT
AGCTCACAGGGGGCCGATGATCGAATGGCCACTGGAACAGACGACCTATCATCTCATATG
AGTTCACTTGCATTGACAGAAATGGAATGGGATGTGAGCAATCAAGTAGAGGCACCAACT
GATGTCAATCATGACTTGAAGCATGGGTATTTTCAGAACCTGGAATCAGATGTTACTTCG
AGGTCTGATGGTGGGATTTCTTCTTTATTGGCAAAGAAACCTGTACTTGCTCAGGATCAG
CTGCACCGATTCAGAAACTTCTTGCAGAGTGACATAAACCACCCCATGACTCAAGCTTCA
GTGGCTGGATCATCATGTGCTACTACAATATCTGTTCATGCAACTTCTGCACCAGTGATC
AATTCAACAACCTACTGCTCCTCTTCACATCAAGATATTAGTCCTCACCTGGCAGTAGAA
ACTCTGGGAGATGTTAATCTTAATTCTCAACCTATAAGTAAAGGAGATGTTATGCAGCCA
TCGCATCCTCCATCTAAGTCCACCAGTGGAGTCATAGTTGACCGCACAGCAATTGCAGCC
CAAGCTTCATCTTCTTCCATAGATACCCAGTCGAAAGTTAAGGAATATGGCTTTAGTGAG
CAACAAGACAGAGTGCCAAATGAAAGGGACATTCCAAAGAATCCTTCTCCTCTTGATGAT
AATTCAACTAAAGGAAAAGGATTCACTGGTGATGTTACTGATTTACAATCTCAGGTGCCC
TTATCCAAAAGTTCATCATCAGATGTGAAATTGGAGACCTCTAAATCTGAAAAACAAGAA
AAGGTTGTAAGTGGTAAAGGGTCATCAGTGCCTCGCAAAAAGAATTATGATCCTGACATG
TTTTTGAAAGTTAATGGTAAGCTCTATCAAAGGCTTGGTAAGATAGGTAGTGGAGGAAGC
AGTGAAGTCCACAAAGTTATATCATCAGATTGTTCTATCTATGCCCTTAAAAAAATCAGG
CTTAAAGGTCGTGATTATGCTACTGCATATGGGTTCTGTCAAGAGATTCAATATTTAAAC
AAGTTGAAAGGGAAGAGCAACATCATACAACTTATTGACTATGAGGTGACAGATAAGACA
TTGCTCCAAGAAGTCATGAATGGCTCCATGAGTAATAAAGATAGCAGAGTCAAGGATGAT
GGATGCATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTAACATGCTGTCCCAG
AAATGGAAGGAAATGGATAGCTCTGATCGGACCATAGATGAGAATTGGCTTCGATTTTAC
TGGCAGCAAATACTTCAAGCTGTCAATACCATACATGAAGAGCGTATAGTGCATTCAGAC
TTGAAGCCAGCGAATTTTCTTCTTGTCAAAGGTTCCTTGAAGCTGATCGATTTTGGAATT
GCTAAAGCTATAATGAGTGATACAACCAACATTCAAAGGGATTCACAGGTGGGTACACTG
AGCTACATGTCTCCTGAAGCATTCATGTGCAATGAGAGTGATGCCAATGGAAACACTATA
AAGTGTGGTCGGCCATCAGATATCTGGTCACTTGGTTGCATCCTTTACCAAATGGTGTAT
GGAAGAACCCCCTTTTCAGAATTCAAGACATTCTGGGCCAAGTTCAAAGTCATTACAGAT
CGTAACCATGAAATAAAGTATGAGCCAGTCTCAAACCCATGGCTTCTTGATATTATGAAG
AAGTGTCTTGCATGGGACCGTAATGAGAGGTGGAGGATTCCTGAGCTACTTCAACACCCT
TTTCTTGTTCCCCCAGTCCCAGTCCTAGCCCAGTTATCATCCTCTCAAGACCAAAGCTGT
AAACTGCTTCAACTGATTACTGAAGCTTGTGCCAATGACCCGAAGGCTTTGATTTTATGT
CGTCAACTTCAACAACTACTAAGGGACCCAGTCACGGTGCCAACATCTCAAGTACTAACA
TCACGAGACCAACAGTGTAAGTTGCTCTCCTATGTGTCAAAGCTTTGCTGTCAACTTCAG
GAATATTTATCAGACCCCGATACGTAA

Peptide Sequence

PEP ID

VIT_18s0001g03680.t01
PEP Infomation

pep chromosome:12X:18:3433101:3445210:1 gene:VIT_18s0001g03680 transcript:VIT_18s0001g03680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGEANLPAPSASANNLSRPILPDSYQNRSITSSSSSSSSSSSFYSSSPPDFLRHVQAAF
KRHRPLGTMQSNSIMPRRILVPRRETSKITASNVVPTIDAKKSQDVRPSMHQGNTGKELV
VEIRNKVSVVGETEEDAPITPPSISGSITNEDLYDVQRVQCKPVAGCKNTDGVSFSHVES
QHVPVVDGQKKVQFLLGKNASSQGADDRMATGTDDLSSHMSSLALTEMEWDVSNQVEAPT
DVNHDLKHGYFQNLESDVTSRSDGGISSLLAKKPVLAQDQLHRFRNFLQSDINHPMTQAS
VAGSSCATTISVHATSAPVINSTTYCSSSHQDISPHLAVETLGDVNLNSQPISKGDVMQP
SHPPSKSTSGVIVDRTAIAAQASSSSIDTQSKVKEYGFSEQQDRVPNERDIPKNPSPLDD
NSTKGKGFTGDVTDLQSQVPLSKSSSSDVKLETSKSEKQEKVVSGKGSSVPRKKNYDPDM
FLKVNGKLYQRLGKIGSGGSSEVHKVISSDCSIYALKKIRLKGRDYATAYGFCQEIQYLN
KLKGKSNIIQLIDYEVTDKTLLQEVMNGSMSNKDSRVKDDGCIYMVLEYGEIDLANMLSQ
KWKEMDSSDRTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGI
AKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNTIKCGRPSDIWSLGCILYQMVY
GRTPFSEFKTFWAKFKVITDRNHEIKYEPVSNPWLLDIMKKCLAWDRNERWRIPELLQHP
FLVPPVPVLAQLSSSQDQSCKLLQLITEACANDPKALILCRQLQQLLRDPVTVPTSQVLT
SRDQQCKLLSYVSKLCCQLQEYLSDPDT

Transcript Sequence

Transcript ID

VIT_18s0001g03680.t01
Transcript Infomation

cdna chromosome:12X:18:3433101:3445210:1 gene:VIT_18s0001g03680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGGGGAGGCTAACCTTCCGGCCCCATCTGCGTCTGCCAATAATCTCAGCCGTCCG
ATCCTGCCTGACTCCTATCAGAACCGTTCGATCACCTCGTCGTCATCGTCATCATCATCG
TCATCATCGTTCTATTCATCTTCTCCGCCGGACTTTCTCCGGCATGTCCAGGCTGCCTTC
AAGCGCCACCGTCCACTCGGTACAATGCAGTCTAATAGTATTATGCCAAGGCGTATATTG
GTTCCCCGGCGAGAAACCTCAAAGATCACTGCATCAAATGTGGTTCCCACAATAGATGCC
AAAAAATCTCAGGATGTGCGTCCTTCAATGCATCAGGGTAACACAGGGAAAGAGTTGGTT
GTGGAGATAAGGAACAAGGTATCTGTTGTTGGGGAAACTGAAGAAGATGCACCAATTACT
CCACCTTCAATTTCAGGCAGTATCACTAATGAAGATCTATATGATGTGCAACGAGTGCAA
TGCAAACCCGTTGCTGGATGCAAAAATACTGATGGGGTTTCATTTTCACATGTAGAATCT
CAGCATGTTCCAGTTGTTGATGGTCAGAAGAAGGTCCAGTTTTTGTTGGGGAAAAATGCT
AGCTCACAGGGGGCCGATGATCGAATGGCCACTGGAACAGACGACCTATCATCTCATATG
AGTTCACTTGCATTGACAGAAATGGAATGGGATGTGAGCAATCAAGTAGAGGCACCAACT
GATGTCAATCATGACTTGAAGCATGGGTATTTTCAGAACCTGGAATCAGATGTTACTTCG
AGGTCTGATGGTGGGATTTCTTCTTTATTGGCAAAGAAACCTGTACTTGCTCAGGATCAG
CTGCACCGATTCAGAAACTTCTTGCAGAGTGACATAAACCACCCCATGACTCAAGCTTCA
GTGGCTGGATCATCATGTGCTACTACAATATCTGTTCATGCAACTTCTGCACCAGTGATC
AATTCAACAACCTACTGCTCCTCTTCACATCAAGATATTAGTCCTCACCTGGCAGTAGAA
ACTCTGGGAGATGTTAATCTTAATTCTCAACCTATAAGTAAAGGAGATGTTATGCAGCCA
TCGCATCCTCCATCTAAGTCCACCAGTGGAGTCATAGTTGACCGCACAGCAATTGCAGCC
CAAGCTTCATCTTCTTCCATAGATACCCAGTCGAAAGTTAAGGAATATGGCTTTAGTGAG
CAACAAGACAGAGTGCCAAATGAAAGGGACATTCCAAAGAATCCTTCTCCTCTTGATGAT
AATTCAACTAAAGGAAAAGGATTCACTGGTGATGTTACTGATTTACAATCTCAGGTGCCC
TTATCCAAAAGTTCATCATCAGATGTGAAATTGGAGACCTCTAAATCTGAAAAACAAGAA
AAGGTTGTAAGTGGTAAAGGGTCATCAGTGCCTCGCAAAAAGAATTATGATCCTGACATG
TTTTTGAAAGTTAATGGTAAGCTCTATCAAAGGCTTGGTAAGATAGGTAGTGGAGGAAGC
AGTGAAGTCCACAAAGTTATATCATCAGATTGTTCTATCTATGCCCTTAAAAAAATCAGG
CTTAAAGGTCGTGATTATGCTACTGCATATGGGTTCTGTCAAGAGATTCAATATTTAAAC
AAGTTGAAAGGGAAGAGCAACATCATACAACTTATTGACTATGAGGTGACAGATAAGACA
TTGCTCCAAGAAGTCATGAATGGCTCCATGAGTAATAAAGATAGCAGAGTCAAGGATGAT
GGATGCATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTAACATGCTGTCCCAG
AAATGGAAGGAAATGGATAGCTCTGATCGGACCATAGATGAGAATTGGCTTCGATTTTAC
TGGCAGCAAATACTTCAAGCTGTCAATACCATACATGAAGAGCGTATAGTGCATTCAGAC
TTGAAGCCAGCGAATTTTCTTCTTGTCAAAGGTTCCTTGAAGCTGATCGATTTTGGAATT
GCTAAAGCTATAATGAGTGATACAACCAACATTCAAAGGGATTCACAGGTGGGTACACTG
AGCTACATGTCTCCTGAAGCATTCATGTGCAATGAGAGTGATGCCAATGGAAACACTATA
AAGTGTGGTCGGCCATCAGATATCTGGTCACTTGGTTGCATCCTTTACCAAATGGTGTAT
GGAAGAACCCCCTTTTCAGAATTCAAGACATTCTGGGCCAAGTTCAAAGTCATTACAGAT
CGTAACCATGAAATAAAGTATGAGCCAGTCTCAAACCCATGGCTTCTTGATATTATGAAG
AAGTGTCTTGCATGGGACCGTAATGAGAGGTGGAGGATTCCTGAGCTACTTCAACACCCT
TTTCTTGTTCCCCCAGTCCCAGTCCTAGCCCAGTTATCATCCTCTCAAGACCAAAGCTGT
AAACTGCTTCAACTGATTACTGAAGCTTGTGCCAATGACCCGAAGGCTTTGATTTTATGT
CGTCAACTTCAACAACTACTAAGGGACCCAGTCACGGTGCCAACATCTCAAGTACTAACA
TCACGAGACCAACAGTGTAAGTTGCTCTCCTATGTGTCAAAGCTTTGCTGTCAACTTCAG
GAATATTTATCAGACCCCGATACGTAAATCACTAATTTTGAGGGTAAAAACATTGGAGAA
TACCTTTTTAAGGTCTGAAAAGCAGTTGTGATTCCCTGTGCCTATTCTCTTCCATTCCTT
TTGTTGTAATAACTTGTAACGGTCAATGCTTGTCG