Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03610.t01
CDS Infomation

cds chromosome:12X:18:3401893:3411144:1 gene:VIT_18s0001g03610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATCCAAGAACCATCATCAGCCAACCCCCGTCTGCAATGGCAACACTAGCGAAAGC
AGCTCACCGAGTCCGCCACCCTCGCCTCGCCGGCACTCTGCTGTGCCCCATTGCCGCCGG
CTGCTCCGCTCCAAGACTTTTTCTCAGTCCCGCCGTGAGAGCTCCGTCGCCGGCATTATT
ATTCGGCGTGGTCTTCGGTACTTCCTGCTTCTGCCTCTGTTCTACATCTCTGGACTGCTC
ATGTGCGTGGGTCCCTTCTCTGGTCTTGTGTGGCAGGCTCCTCTCCCTGGTTCAGTCTAC
CGTAGCCACGAGATCTTTGAGAAGCTTTGGCACGAAATTGAATCCGATAATTCCTCAGCT
ATTGAGTTGTCTTCTGTATGGAGATACAATAGGAGGCTGAAAGAGCAGAAACCTTGTCCA
AACACAAGCTATAGACACCATTTTGCTACAAAACGTGAGTCGCCTGACCCTAGTGGCTAC
TTGATTGTTGAGGCTAATGGCGGCCTTAATCAACAGCGCTCATCGATCTGCAATGCAGTG
GCTGTAGCTGGGCTTTTGAATGCAATACTAGTCATTCCTCACCTTGATTTTCACAGTGTT
TGGGTGGATCCAAGGCAATTTGGGGATATTTATGATGAGGACCATTTCATAACCACCCTC
AAAGGGTTTGTAGAAGTGGTCCAGGAGCTACCGGAGGTAGTGATGGAAAGATATGATTAC
AACATTACTAATATACCAAACATTCGAATTGAAGCTTGGGCTCCTGTAAGTTATTACTTG
GAAGAAGTTTATCCAGTCTTACGCAAGCAAGGAGTTATTCGCATAGCCCCATTTGCTAAT
AGATTGGCAATGAATGTTCCTCCTCGTGTTCAATTCCTGAGATGCTTAGCCAACAACGTA
GCATTGAGGTTCTCTTTTCCTGTTTCAACTCTTGCTAGGAAATTAGTTAAACGAATGATT
GAGAAGAGCTCAAGAACTGGTGGAAAGTATGTTTCTGTCCACCTTCGTTTTGAGGAGGAC
ATGGTGGCCTTCTCATGCTGTCTATATGATGGAGGAAAAGCTGAAAATTTTGAAATGGAC
TTAGTTCGAGAAAAAGGGTGGAGGGGAAAGTTTAGGCGTAAAGACCGTTTAATTCAACCT
GGTCTCAATCGAATTAATGGAAAATGCCCTCTAACTCCTTTGGAGGTAGGAATGATGCTA
CGGGGTATGGGATTTGATAACAACACTTCAATTTATTTGGCCTCTGGGAAAATATACCAG
GCGGAGCGACATTTGGATCCTCTACTAAAGATGTTTCCCCTTCTCTATACCAAGGAGTCC
CTTGCAACCTCAGATGAGCTTGCACCTTTTAAGGGCTATTCTTCAAGGTTGGCTGCATTG
GACTACACAGTATGTCTGTTTAGTGAAGTTTTTGTGACAACTCAGGGTGGAAACTTCCCC
CATTTCCTGATGGGTCACAGGAGATTCCTCTTTGGTGGACATGCTAAGACCATTCAACCT
GACAAGCGGAAGCTCGTTATTCTGCTGCAGGACATGGATATTAGTTGGAAAGCTTTCAAG
AATGAGATGGAATCAATGCTTATCGAGAGTGATCGGAAGGGGATGAATGTACCCAGAATT
AAAAAGTCCAGAAGAAAGTCTTCCATCTATACCTACCCTTTGCCAGAATGCAGGTGTCTC
CTGGAATCACAAAACTCAACAATCAAATTTACTCATACTACCCACATGCTTGATGATGAG
GCTGAATCCGTGGTATAA

Peptide Sequence

PEP ID

VIT_18s0001g03610.t01
PEP Infomation

pep chromosome:12X:18:3401893:3411144:1 gene:VIT_18s0001g03610 transcript:VIT_18s0001g03610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSKNHHQPTPVCNGNTSESSSPSPPPSPRRHSAVPHCRRLLRSKTFSQSRRESSVAGII
IRRGLRYFLLLPLFYISGLLMCVGPFSGLVWQAPLPGSVYRSHEIFEKLWHEIESDNSSA
IELSSVWRYNRRLKEQKPCPNTSYRHHFATKRESPDPSGYLIVEANGGLNQQRSSICNAV
AVAGLLNAILVIPHLDFHSVWVDPRQFGDIYDEDHFITTLKGFVEVVQELPEVVMERYDY
NITNIPNIRIEAWAPVSYYLEEVYPVLRKQGVIRIAPFANRLAMNVPPRVQFLRCLANNV
ALRFSFPVSTLARKLVKRMIEKSSRTGGKYVSVHLRFEEDMVAFSCCLYDGGKAENFEMD
LVREKGWRGKFRRKDRLIQPGLNRINGKCPLTPLEVGMMLRGMGFDNNTSIYLASGKIYQ
AERHLDPLLKMFPLLYTKESLATSDELAPFKGYSSRLAALDYTVCLFSEVFVTTQGGNFP
HFLMGHRRFLFGGHAKTIQPDKRKLVILLQDMDISWKAFKNEMESMLIESDRKGMNVPRI
KKSRRKSSIYTYPLPECRCLLESQNSTIKFTHTTHMLDDEAESVV

Transcript Sequence

Transcript ID

VIT_18s0001g03610.t01
Transcript Infomation

cdna chromosome:12X:18:3401893:3411144:1 gene:VIT_18s0001g03610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATCCAAGAACCATCATCAGCCAACCCCCGTCTGCAATGGCAACACTAGCGAAAGC
AGCTCACCGAGTCCGCCACCCTCGCCTCGCCGGCACTCTGCTGTGCCCCATTGCCGCCGG
CTGCTCCGCTCCAAGACTTTTTCTCAGTCCCGCCGTGAGAGCTCCGTCGCCGGCATTATT
ATTCGGCGTGGTCTTCGGTACTTCCTGCTTCTGCCTCTGTTCTACATCTCTGGACTGCTC
ATGTGCGTGGGTCCCTTCTCTGGTCTTGTGTGGCAGGCTCCTCTCCCTGGTTCAGTCTAC
CGTAGCCACGAGATCTTTGAGAAGCTTTGGCACGAAATTGAATCCGATAATTCCTCAGCT
ATTGAGTTGTCTTCTGTATGGAGATACAATAGGAGGCTGAAAGAGCAGAAACCTTGTCCA
AACACAAGCTATAGACACCATTTTGCTACAAAACGTGAGTCGCCTGACCCTAGTGGCTAC
TTGATTGTTGAGGCTAATGGCGGCCTTAATCAACAGCGCTCATCGATCTGCAATGCAGTG
GCTGTAGCTGGGCTTTTGAATGCAATACTAGTCATTCCTCACCTTGATTTTCACAGTGTT
TGGGTGGATCCAAGGCAATTTGGGGATATTTATGATGAGGACCATTTCATAACCACCCTC
AAAGGGTTTGTAGAAGTGGTCCAGGAGCTACCGGAGGTAGTGATGGAAAGATATGATTAC
AACATTACTAATATACCAAACATTCGAATTGAAGCTTGGGCTCCTGTAAGTTATTACTTG
GAAGAAGTTTATCCAGTCTTACGCAAGCAAGGAGTTATTCGCATAGCCCCATTTGCTAAT
AGATTGGCAATGAATGTTCCTCCTCGTGTTCAATTCCTGAGATGCTTAGCCAACAACGTA
GCATTGAGGTTCTCTTTTCCTGTTTCAACTCTTGCTAGGAAATTAGTTAAACGAATGATT
GAGAAGAGCTCAAGAACTGGTGGAAAGTATGTTTCTGTCCACCTTCGTTTTGAGGAGGAC
ATGGTGGCCTTCTCATGCTGTCTATATGATGGAGGAAAAGCTGAAAATTTTGAAATGGAC
TTAGTTCGAGAAAAAGGGTGGAGGGGAAAGTTTAGGCGTAAAGACCGTTTAATTCAACCT
GGTCTCAATCGAATTAATGGAAAATGCCCTCTAACTCCTTTGGAGGTAGGAATGATGCTA
CGGGGTATGGGATTTGATAACAACACTTCAATTTATTTGGCCTCTGGGAAAATATACCAG
GCGGAGCGACATTTGGATCCTCTACTAAAGATGTTTCCCCTTCTCTATACCAAGGAGTCC
CTTGCAACCTCAGATGAGCTTGCACCTTTTAAGGGCTATTCTTCAAGGTTGGCTGCATTG
GACTACACAGTATGTCTGTTTAGTGAAGTTTTTGTGACAACTCAGGGTGGAAACTTCCCC
CATTTCCTGATGGGTCACAGGAGATTCCTCTTTGGTGGACATGCTAAGACCATTCAACCT
GACAAGCGGAAGCTCGTTATTCTGCTGCAGGACATGGATATTAGTTGGAAAGCTTTCAAG
AATGAGATGGAATCAATGCTTATCGAGAGTGATCGGAAGGGGATGAATGTACCCAGAATT
AAAAAGTCCAGAAGAAAGTCTTCCATCTATACCTACCCTTTGCCAGAATGCAGGTGTCTC
CTGGAATCACAAAACTCAACAATCAAATTTACTCATACTACCCACATGCTTGATGATGAG
GCTGAATCCGTGGTATAAAGAACACACAGCATGCTTCAGCAGCTTTCTTCTGTGCAGAAC
CATAGACATTGTACTTTATCTGGCCTTGATCCCTCTTTGATTTTTCTTAAGCCCCTGTTA
AGTGTGGAACCTGTGATGCAAAGGCAGGTAAGTCATTGCAGTTGTACAGGTGAGAGATGC
GGGTTTCCAATTTTGGCCTAATGGGGAATTCTTGGGTTGCTGCCCTTGTGAAGGTTATGA
AACTATTTTTCTACACCTACATATATGTATATATAAATGGTTTAAGTCATTAA