Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03540.t01
CDS Infomation

cds chromosome:12X:18:3380455:3383288:-1 gene:VIT_18s0001g03540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCCGAGAAGGTTGAGACCATTGTTGCCGGCAACTACTTGGAGATGGAAAGGGAA
GAAGGCGATTCCAAGTCGACTAAGAGCAGATTATCGGCCTTGTTTTGGCACGGCGGCTCG
GTCTATGATGCCTGGTTCAGCTGTGCTTCTAATCAGGTTGCCCAAGTGCTTCTCACACTG
CCTTACTCGTTTTCACAACTGGGGATGTTATCTGGAATTCTCTTTCAACTGTTTTATGGG
TTGATGGGGAGTTGGACTGCTTATCTCATAAGCGTACTTTATGTTGAGTACAGAACTAGA
AAGGAGAGAGAAAAGGTTGATTTTAGAAATCATGTAATTCAGTGGTTTGAAGTCCTTGAT
GGGCTTTTGGGGAAGCACTGGAGGAATGTAGGCCTACTTTTCAACTGCACTTTCCTTCTC
TTTGGCTCCGTGATACAGCTGATTGCCTGTGCAAGCAACATCTACTACATAAATGACAAT
TTCGACAAGAGAACTTGGACGTACATCTTCGGCGCCTGCTGTGCTACGACCGTTTTCATT
CCTTCATTCCATAATTACAGAATTTGGTCATTCTTAGGCCTTATGATGACCACCTACACT
TCTTGGTATCTAACCATTGCTTCCTTTATCCATGGGCAGGTTGAGGGGGTGAAGCACTCT
GGCCCAACCAAAATGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTACACCTTTGGT
GGTCATGCTGTCACAGTGGAGATAATGCATGCGATGTGGAAGCCCCAAAGGTTCAAGCTA
ATATACTTGACAGCAACTCTCTATGTGCTGACCCTAACACTGCCGTCAGCTTCCGCTGTT
TATTGGGCTTTTGGGGATATGCTCCTTAACCATTCCAATGCTTTCTCTTTGCTGCCAAGG
TCTGGATACAGAGACACTGCTGTCATCCTCATGCTCATTCATCAGTTCATAACATTCGGA
TTTGCATGCACTCCTCTGTACTTTGTTTGGGAAAAGTTCGTCGGTGTGCACGACACAAAG
AGTGTGTGCAAGCGAGCCCTAGCCCGACTACCCGTGGTGATCCCCATATGGTTCCTGGCC
ATCATTTTCCCTTTCTTCGGTCCCATCAACTCCACAGTTGGATCACTTCTTGTCAGCTTC
ACCGTCTACATAATCCCAGCCTTAGCTCACATGATAACATTTTCTTCGCCATCTTCTAGA
GAGAATGCAGTGGAGAGACCACCGTCATTCTTAGGAGGTTGGGCCGGCGTATACTCAATG
AACGCCTTTGTGGTGGGATGGATTTTGGTGGTGGGATTCGGGTTTGGAGGGTGGGCAAGC
ATGCTCAACTTCATTCAACAAATTAATACATTTGGACTCTTCACAAAATGCTACCAGTGC
CCTCGCAAGGCTTGA

Peptide Sequence

PEP ID

VIT_18s0001g03540.t01
PEP Infomation

pep chromosome:12X:18:3380455:3383288:-1 gene:VIT_18s0001g03540 transcript:VIT_18s0001g03540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASEKVETIVAGNYLEMEREEGDSKSTKSRLSALFWHGGSVYDAWFSCASNQVAQVLLTL
PYSFSQLGMLSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLD
GLLGKHWRNVGLLFNCTFLLFGSVIQLIACASNIYYINDNFDKRTWTYIFGACCATTVFI
PSFHNYRIWSFLGLMMTTYTSWYLTIASFIHGQVEGVKHSGPTKMVLYFTGATNILYTFG
GHAVTVEIMHAMWKPQRFKLIYLTATLYVLTLTLPSASAVYWAFGDMLLNHSNAFSLLPR
SGYRDTAVILMLIHQFITFGFACTPLYFVWEKFVGVHDTKSVCKRALARLPVVIPIWFLA
IIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFSSPSSRENAVERPPSFLGGWAGVYSM
NAFVVGWILVVGFGFGGWASMLNFIQQINTFGLFTKCYQCPRKA

Transcript Sequence

Transcript ID

VIT_18s0001g03540.t01
Transcript Infomation

cdna chromosome:12X:18:3380455:3383288:-1 gene:VIT_18s0001g03540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGGTGACTCAATCATTGTGTGTGAAAATTTTATAGAGGAAAAGGGGGTGAATGGGGCTT
ATCACTAGCAGAAAGTGAGAAAGGAGGCACTTGCTCTATTTCTATTTATAAACTCCTGCT
ATATGCCTTCATAACTACTAATCCAACATATCAATAAGTCTCCGCAGCAATGGCTTCCGA
GAAGGTTGAGACCATTGTTGCCGGCAACTACTTGGAGATGGAAAGGGAAGAAGGCGATTC
CAAGTCGACTAAGAGCAGATTATCGGCCTTGTTTTGGCACGGCGGCTCGGTCTATGATGC
CTGGTTCAGCTGTGCTTCTAATCAGGTTGCCCAAGTGCTTCTCACACTGCCTTACTCGTT
TTCACAACTGGGGATGTTATCTGGAATTCTCTTTCAACTGTTTTATGGGTTGATGGGGAG
TTGGACTGCTTATCTCATAAGCGTACTTTATGTTGAGTACAGAACTAGAAAGGAGAGAGA
AAAGGTTGATTTTAGAAATCATGTAATTCAGTGGTTTGAAGTCCTTGATGGGCTTTTGGG
GAAGCACTGGAGGAATGTAGGCCTACTTTTCAACTGCACTTTCCTTCTCTTTGGCTCCGT
GATACAGCTGATTGCCTGTGCAAGCAACATCTACTACATAAATGACAATTTCGACAAGAG
AACTTGGACGTACATCTTCGGCGCCTGCTGTGCTACGACCGTTTTCATTCCTTCATTCCA
TAATTACAGAATTTGGTCATTCTTAGGCCTTATGATGACCACCTACACTTCTTGGTATCT
AACCATTGCTTCCTTTATCCATGGGCAGGTTGAGGGGGTGAAGCACTCTGGCCCAACCAA
AATGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTACACCTTTGGTGGTCATGCTGT
CACAGTGGAGATAATGCATGCGATGTGGAAGCCCCAAAGGTTCAAGCTAATATACTTGAC
AGCAACTCTCTATGTGCTGACCCTAACACTGCCGTCAGCTTCCGCTGTTTATTGGGCTTT
TGGGGATATGCTCCTTAACCATTCCAATGCTTTCTCTTTGCTGCCAAGGTCTGGATACAG
AGACACTGCTGTCATCCTCATGCTCATTCATCAGTTCATAACATTCGGATTTGCATGCAC
TCCTCTGTACTTTGTTTGGGAAAAGTTCGTCGGTGTGCACGACACAAAGAGTGTGTGCAA
GCGAGCCCTAGCCCGACTACCCGTGGTGATCCCCATATGGTTCCTGGCCATCATTTTCCC
TTTCTTCGGTCCCATCAACTCCACAGTTGGATCACTTCTTGTCAGCTTCACCGTCTACAT
AATCCCAGCCTTAGCTCACATGATAACATTTTCTTCGCCATCTTCTAGAGAGAATGCAGT
GGAGAGACCACCGTCATTCTTAGGAGGTTGGGCCGGCGTATACTCAATGAACGCCTTTGT
GGTGGGATGGATTTTGGTGGTGGGATTCGGGTTTGGAGGGTGGGCAAGCATGCTCAACTT
CATTCAACAAATTAATACATTTGGACTCTTCACAAAATGCTACCAGTGCCCTCGCAAGGC
TTGAGTTGAGTTGCTTCCCTACTTTCAAAAGGAAATTAAATCAAGAAATTAAGATACATA
TATAAGTGTGTAAAGAGATTGGGCATTTGTAATTTTTTTTCTCTCCCTTTTGTTTTTTTT
TTTTTTTTTGTTTTTTCTCTTCTAAGAGATCTTGTAACTCGTGTGTTGATCAGCCCTACT
ACGAAATGTAACTCCCCTGGTTTTTCTGGGCACCCAGCTCTAAGTATGAACAATCCTCCA
TTTC