Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g03080.t01
CDS Infomation

cds chromosome:12X:18:3098022:3101041:1 gene:VIT_18s0001g03080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTAACCAAAGCACACTGTCTGGGCTCTTCGTTCTCTTCTTCTTGGTCTTGAGCAAT
GTGGACGTCGTGAGATCCAAATCCACCATCGAGCCATGCTCGAACTCCGACTCATGCAAC
GCCATGGTGGGTTACACGCTCTACACCGACCTTAAGGTCTCGGAAGTGGCGACCCTATTC
CAAGTCGACCCCATTGCTATTCTCACCGCCAACGCCATTGACATTTCGTATCCGGATGTT
GAGAATCACATCCTTCCCTCCCAGCTCTTCCTCAAAATCCCCATTTACTGCTCCTGCGTC
GACGGAATCAGAAAATCAGTCACCACACGGTACAAGACTCGCCCCTCCGATACTCTCTCA
TCGATTGCCGATTCGATTTACGCGGGTCTTGTGTCCGCGGATCAGCTCAGGGAGGCGAAT
TCGATATCGGATCCTTCGGTTCTGGATGTGGGGCAGACCCTTGTGGTTCCGCTTCCTTGT
ACTTGCTTCAATGGGACTGATAATTTGTTGCCGGCCACTTATTTATCGTATGTGGTGAAA
GTTGATGACACATTGACAGGCATTGCTTCCAGGTATTCGACTACTATTTCTGATCTAATG
ACTGTGAATGCAATGGGGAGTCCAGCAATTAAGGCTGGTGATATACTTGCTGTTCCTTTG
CCAGCTTGTGCATCTAATTTTCCAAAATATGCTTCGGACTATGGGCTAGCTGTGCCAAAT
GGGAGTTATGCTATCACTGCAAGTCACTGTGTACAATGCAGTTGTGGGCCAGGAAGTCTC
AATTTATACTGCATGCCAGCATCTTTGGCAGTCTCTTGTTCAAGTATGCAATGCAGGAAT
ACTAACCTTATGCTCGGGAATGTTACAATGCAAAAGAGTAGTGCTGGCTGCAATGTTACA
TCTTGTAGCTATGGTGGTTTTGTCAATGGCACCATTATTGCTACGCTGACCACATCCCTT
CAACCTCGATGTCCAGGGATCCAGCAATTTCCTCCACTTATAGCACCACCATCTTCAGTA
ATCAGGGATTCATTCTATGCCCCATCACCTTCTCCATCTCAGTCAGATGGTGCTGGAACA
ACAATTCCTAGTCCTTCGGTGGTGCCTTCAACAGGGTCAATTCCAGGTTTTGCTCCCGCC
AATGGCCCAACTGGAAGTGCCTCTGATGCTAGCTCTTTGGTGAACCCCTTAGCCAGTTTC
CCTGTTGTGATTGCCTTATGTTTGTTTTTCAAGTTAATGGTCTCGTCCTTTTTATAA

Peptide Sequence

PEP ID

VIT_18s0001g03080.t01
PEP Infomation

pep chromosome:12X:18:3098022:3101041:1 gene:VIT_18s0001g03080 transcript:VIT_18s0001g03080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFNQSTLSGLFVLFFLVLSNVDVVRSKSTIEPCSNSDSCNAMVGYTLYTDLKVSEVATLF
QVDPIAILTANAIDISYPDVENHILPSQLFLKIPIYCSCVDGIRKSVTTRYKTRPSDTLS
SIADSIYAGLVSADQLREANSISDPSVLDVGQTLVVPLPCTCFNGTDNLLPATYLSYVVK
VDDTLTGIASRYSTTISDLMTVNAMGSPAIKAGDILAVPLPACASNFPKYASDYGLAVPN
GSYAITASHCVQCSCGPGSLNLYCMPASLAVSCSSMQCRNTNLMLGNVTMQKSSAGCNVT
SCSYGGFVNGTIIATLTTSLQPRCPGIQQFPPLIAPPSSVIRDSFYAPSPSPSQSDGAGT
TIPSPSVVPSTGSIPGFAPANGPTGSASDASSLVNPLASFPVVIALCLFFKLMVSSFL

Transcript Sequence

Transcript ID

VIT_18s0001g03080.t01
Transcript Infomation

cdna chromosome:12X:18:3098022:3101041:1 gene:VIT_18s0001g03080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCTCTTTCAAAAGCTTTTGTTTTCCAGCTCTTCTTCTCACTCTTTCCCACTCTTTCTAT
TCTTCTTGGTGGAAAAAAACATCGGAAGAAGAAGAAATCCAAAGCCCAAAACCCTAATGC
GGAGCCATAAACCCTTCTCTTTTTGTTGCCGAGCTTAGCTCACCATTTTTGCTCTGTAAA
ACCCTGAAAGGGCTACAGATGCCCTATCCAATAACCAACGCAAAAACCCTATTTTTTTTT
CGTACTTAGCACTCTTCCGTTGTTCTGTTTCTCCCTTCTGTAGAACTAGGAAGAACATTA
AGCTCAAACCCCCAAAATGTTTAACCAAAGCACACTGTCTGGGCTCTTCGTTCTCTTCTT
CTTGGTCTTGAGCAATGTGGACGTCGTGAGATCCAAATCCACCATCGAGCCATGCTCGAA
CTCCGACTCATGCAACGCCATGGTGGGTTACACGCTCTACACCGACCTTAAGGTCTCGGA
AGTGGCGACCCTATTCCAAGTCGACCCCATTGCTATTCTCACCGCCAACGCCATTGACAT
TTCGTATCCGGATGTTGAGAATCACATCCTTCCCTCCCAGCTCTTCCTCAAAATCCCCAT
TTACTGCTCCTGCGTCGACGGAATCAGAAAATCAGTCACCACACGGTACAAGACTCGCCC
CTCCGATACTCTCTCATCGATTGCCGATTCGATTTACGCGGGTCTTGTGTCCGCGGATCA
GCTCAGGGAGGCGAATTCGATATCGGATCCTTCGGTTCTGGATGTGGGGCAGACCCTTGT
GGTTCCGCTTCCTTGTACTTGCTTCAATGGGACTGATAATTTGTTGCCGGCCACTTATTT
ATCGTATGTGGTGAAAGTTGATGACACATTGACAGGCATTGCTTCCAGGTATTCGACTAC
TATTTCTGATCTAATGACTGTGAATGCAATGGGGAGTCCAGCAATTAAGGCTGGTGATAT
ACTTGCTGTTCCTTTGCCAGCTTGTGCATCTAATTTTCCAAAATATGCTTCGGACTATGG
GCTAGCTGTGCCAAATGGGAGTTATGCTATCACTGCAAGTCACTGTGTACAATGCAGTTG
TGGGCCAGGAAGTCTCAATTTATACTGCATGCCAGCATCTTTGGCAGTCTCTTGTTCAAG
TATGCAATGCAGGAATACTAACCTTATGCTCGGGAATGTTACAATGCAAAAGAGTAGTGC
TGGCTGCAATGTTACATCTTGTAGCTATGGTGGTTTTGTCAATGGCACCATTATTGCTAC
GCTGACCACATCCCTTCAACCTCGATGTCCAGGGATCCAGCAATTTCCTCCACTTATAGC
ACCACCATCTTCAGTAATCAGGGATTCATTCTATGCCCCATCACCTTCTCCATCTCAGTC
AGATGGTGCTGGAACAACAATTCCTAGTCCTTCGGTGGTGCCTTCAACAGGGTCAATTCC
AGGTTTTGCTCCCGCCAATGGCCCAACTGGAAGTGCCTCTGATGCTAGCTCTTTGGTGAA
CCCCTTAGCCAGTTTCCCTGTTGTGATTGCCTTATGTTTGTTTTTCAAGTTAATGGTCTC
GTCCTTTTTATAATTTTGCTTGTCAAATGCGTGCCTAGTCCATGGGATTTTGTTCTGCAT
GGTTTCTGCCTTTCTGTCAGGTTCCCCCTTGTTGTGTTCGACTTCTTTTATTTATTCTCA
TCAGTAGATTGATTTGTGGATGCGGGAAGCCAGAGAATTTTATTCTGCTTAGCATTTTGT
TCCACTCATTTGCCTTACCTAGCTACTCTGTACTCTGCGACATAGGCGGTTCCCCTCACT
GTATTTTATCATTGTGAACATTATTATCCAGAGCTTTAAGAAACTGCTTGAGTGACTGCT
TTGCTTTTTGTAA