Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g02700.t01
CDS Infomation

cds chromosome:12X:18:2881700:2884919:-1 gene:VIT_18s0001g02700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGGTGCGAGGTTTCAGGGTGAAAGACGAGGGCTTCGGGTGTTTGCTGTATTTGGA
GATGAAAGTGGGTCAGTGGAGAGGAAGAGCACATGGGGCACAATCTTTGATGTGGAGGAT
CCAAGGTCTAAATTCCCACAATCCAAAGGGAAGTTCTTGGATGTAAATCAAGCTCTTGAA
GTAGCTAGATTTGATATTCAGTACTGTGATTGGCGGGCTCGGCAAGATCTGCTTACAATC
ATGCTCCTCCATGAAAAGGTTGTGGAAGTTCTAAATCCTTTGGCCCGTGAATACAAGTCC
ATTGGCACATTGAAGAAGGACCTTGCAGGGCTGCAAGAAGAGCTAGCACAAGCTCACAGA
CAGGTTCATATATCTGAAGCAAGGGTTGGCACTGCTTTAGATAAGTTGGCTTACATGGAA
GAATTGGTTAATGATAGGCTATTACAAGACAGAAATACAGCAGATTCAAATCAAACTTCA
ACTTCAACTTCTCCTAGTACTTCCACAGCATCTCTTGATATGGTAAAGAGAAAGCTTCCC
CAGAAAAGTTTGAATGTTTCAGGTCCTGTTCAGCCTTACCATCCTCGTCTGAAGAATTTC
TGGTACCCTGTTGCTTTCTCCACAGACCTGAAGGATGATACCATGATTCCAATTGATTGC
TTTGAGGAACCGTGGGTTGTCTTTCGTGGGCAAGATGGGAAACCTGGATGTGTCCGTAAC
ACCTGCGCCCATAGAGCATGCCCTCTTCATCTTGGATCAGTAAACGAGGGTCGTATCCAA
TGTCCTTACCATGGGTGGGAGTACTCAACAGATGGGAAATGCGAGAAAATGCCGTCAACA
CGATTGCTTAATGTAAAAATAAAATCATTGCCGTGTTTAGAGCAAGAGGGAATGATCTGG
ATTTGGCCTGGCAGTGATCCTCCAACAGCCACCCTTCCTTCTTTACAACCTCCACCAGGA
TTTAAAATCCATGCTGAGATTGTCATGGAACTTCCAGTGGAACATGGGCTTCTTCTGGAT
AACCTTTTGGATCTTGCACATGCCCCTTTCACTCATACATCCACCTTTGCCAAAGGATGG
AGCGTGCCTAGCTTGGTAAAATTCTTGACACCTGCATCTGGACTCCAAGGATACTGGGAT
CCCTACCCCATAGATATGGAATTTCGACCACCTTGTATGGTGCTGTCAACCATTGGTATC
TCAAAACCCGGGAAATTGGAGGGACAGAGCACCAAGCAGTGTGCGACACATCTTCATCAG
CTCCATGTCTGCTTACCTTCATCAAGAGACAAGACAAGGTTACTGTACAGAATGTCACTG
GACTTTGCTCCTGTGCTTCAGCACATCCCTTTCATGCAATATCTCTGGAGATATTTTGCA
GAAAAGGTGTTGAATGAGGATCTACGGCTTGTACTTGGACAACAAGACCGGATGCTGATG
GGGGCAAATGTGTGGAACTGCCCAGTATCATATGACAAGCTTGGAGTGAGGTACAGGCTA
TGGAGAGACGCTGTGGAACGAGGAGCTAAGCGATTACCCTTCACTGAATCAACATAA

Peptide Sequence

PEP ID

VIT_18s0001g02700.t01
PEP Infomation

pep chromosome:12X:18:2881700:2884919:-1 gene:VIT_18s0001g02700 transcript:VIT_18s0001g02700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGARFQGERRGLRVFAVFGDESGSVERKSTWGTIFDVEDPRSKFPQSKGKFLDVNQALE
VARFDIQYCDWRARQDLLTIMLLHEKVVEVLNPLAREYKSIGTLKKDLAGLQEELAQAHR
QVHISEARVGTALDKLAYMEELVNDRLLQDRNTADSNQTSTSTSPSTSTASLDMVKRKLP
QKSLNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMIPIDCFEEPWVVFRGQDGKPGCVRN
TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCLEQEGMIW
IWPGSDPPTATLPSLQPPPGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGW
SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKQCATHLHQ
LHVCLPSSRDKTRLLYRMSLDFAPVLQHIPFMQYLWRYFAEKVLNEDLRLVLGQQDRMLM
GANVWNCPVSYDKLGVRYRLWRDAVERGAKRLPFTEST

Transcript Sequence

Transcript ID

VIT_18s0001g02700.t01
Transcript Infomation

cdna chromosome:12X:18:2881700:2884919:-1 gene:VIT_18s0001g02700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCAATGAGGACCCAAAAGCTATGTTTTCTTGTTTGTTTGATAAATTATATGGGCAGTTG
AATTTTCGGGTGGATTGTGGAATTTAACCCCAGATGATATGAACTTTGATTTGTTATCCT
GATAACTTTGCTTTGGCGCATGATAAATCTGGAAGAAAATTGAGTTAGGGTTATCAGATT
TGTTGCTTATATCATGATGGGTGGTGCGAGGTTTCAGGGTGAAAGACGAGGGCTTCGGGT
GTTTGCTGTATTTGGAGATGAAAGTGGGTCAGTGGAGAGGAAGAGCACATGGGGCACAAT
CTTTGATGTGGAGGATCCAAGGTCTAAATTCCCACAATCCAAAGGGAAGTTCTTGGATGT
AAATCAAGCTCTTGAAGTAGCTAGATTTGATATTCAGTACTGTGATTGGCGGGCTCGGCA
AGATCTGCTTACAATCATGCTCCTCCATGAAAAGGTTGTGGAAGTTCTAAATCCTTTGGC
CCGTGAATACAAGTCCATTGGCACATTGAAGAAGGACCTTGCAGGGCTGCAAGAAGAGCT
AGCACAAGCTCACAGACAGGTTCATATATCTGAAGCAAGGGTTGGCACTGCTTTAGATAA
GTTGGCTTACATGGAAGAATTGGTTAATGATAGGCTATTACAAGACAGAAATACAGCAGA
TTCAAATCAAACTTCAACTTCAACTTCTCCTAGTACTTCCACAGCATCTCTTGATATGGT
AAAGAGAAAGCTTCCCCAGAAAAGTTTGAATGTTTCAGGTCCTGTTCAGCCTTACCATCC
TCGTCTGAAGAATTTCTGGTACCCTGTTGCTTTCTCCACAGACCTGAAGGATGATACCAT
GATTCCAATTGATTGCTTTGAGGAACCGTGGGTTGTCTTTCGTGGGCAAGATGGGAAACC
TGGATGTGTCCGTAACACCTGCGCCCATAGAGCATGCCCTCTTCATCTTGGATCAGTAAA
CGAGGGTCGTATCCAATGTCCTTACCATGGGTGGGAGTACTCAACAGATGGGAAATGCGA
GAAAATGCCGTCAACACGATTGCTTAATGTAAAAATAAAATCATTGCCGTGTTTAGAGCA
AGAGGGAATGATCTGGATTTGGCCTGGCAGTGATCCTCCAACAGCCACCCTTCCTTCTTT
ACAACCTCCACCAGGATTTAAAATCCATGCTGAGATTGTCATGGAACTTCCAGTGGAACA
TGGGCTTCTTCTGGATAACCTTTTGGATCTTGCACATGCCCCTTTCACTCATACATCCAC
CTTTGCCAAAGGATGGAGCGTGCCTAGCTTGGTAAAATTCTTGACACCTGCATCTGGACT
CCAAGGATACTGGGATCCCTACCCCATAGATATGGAATTTCGACCACCTTGTATGGTGCT
GTCAACCATTGGTATCTCAAAACCCGGGAAATTGGAGGGACAGAGCACCAAGCAGTGTGC
GACACATCTTCATCAGCTCCATGTCTGCTTACCTTCATCAAGAGACAAGACAAGGTTACT
GTACAGAATGTCACTGGACTTTGCTCCTGTGCTTCAGCACATCCCTTTCATGCAATATCT
CTGGAGATATTTTGCAGAAAAGGTGTTGAATGAGGATCTACGGCTTGTACTTGGACAACA
AGACCGGATGCTGATGGGGGCAAATGTGTGGAACTGCCCAGTATCATATGACAAGCTTGG
AGTGAGGTACAGGCTATGGAGAGACGCTGTGGAACGAGGAGCTAAGCGATTACCCTTCAC
TGAATCAACATAAATGCAGCTTCAGCTACATATTCTAACTTCGATTACCGCTCCTTCAGA
ACCAACCCCCAAGTACCCAACTCTGCAGACCATCAACTATAACTCCTTTGAATATATTCT
GCAGTTAGGTGCCCACCAAGAAGATCCTTCCAGTGCGACCCCCAACGGCAACTGTGAATT
AATATGAGGCAGAAAAGAGATGGTTCCTACAAGACAAAGCCCCTGTAAAATAAATTGATA
CTGTACACTACCTTCATTTTTGTTTCGTGTACAGTGTCAAATCCATTTTATTTTATTTTT
TCATCTTTTGGTACTTGTTTTGGAGAACAATGGAATCATAAAGATTGCTTTCCAGCCAAA
ATAAGTATCATTGATCTCTGATCCAGTGTCACTGTATAATAGCATCACTCTGTCCTCATT
TTATAAATGAAAATTC