Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g02370.t01
CDS Infomation

cds chromosome:12X:18:2677244:2684335:-1 gene:VIT_18s0001g02370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAGGCAGTCACAGTAATGGACATCGACGAGGAAGACAACCATTTGCTGAAAGCA
AACAAGGGCAAGTCTGTCGTTGTCGGAGGTCCGCCGGATCGCAAAGCAACTCCGTGGGTA
GAGAAGTACCGGCCACAGTCCCTTGCCGACGTTGCCGCTCATCGCGACATTGTCGATACC
ATCGATAGGCTCACGAGTGAGAATAGATTGCCCCATCTACTACTGTATGGACCTCCCGGT
ACGGGTAAAACCTCAACTATTCTCGCAGTCGCTCGCAAGCTGTACGGAGAACAGTTCCAT
AATATGATTCTCGAGTTGAATGCTTCCGATGATCGTGGGATAGATGTGGTGCGGCAGCAG
ATCCAAGATTTTGCTAGCACTCAGAGCTTCTCCTTTGGTGCAAAGTCGTCCGTGAAGTTG
GTTCTATTGGATGAGGCAGATGCGATGACAAAGGATGCACAGTTTGCCTTGCGCCGGGTG
ATTGAGAAGTACACAAAGAACACTAGGTTTGCACTAATTTGTAATCACGTCAACAAGATT
ATTCCAGCGCTACAGTCAAGGTGTACTCGATTTCGGTTTGCCCCTCTTGATGCAGTTCAT
GTTACTGAGCGACTTAAACATGTTATAAATGCTGAAAAACTTGATGTATCTGAGAGTGGC
TTAGCAGCACTTGTACGGCTGAGCAGTGGTGACATGAGAAAGGCTTTGAACATTTTGCAG
TCAACACATATGGCTTCTCAGCAGATAACGGAGGAAGCTGTCTATCTGTGCACTGGAAAT
CCATTGCCTAAAGACATTGAGCAAATTTCTTACTGGCTGCTGAATGAATCATTTGCAGCT
AGTTTTGATCGAATATCTGAAGTCAAGATGAGGAAAGGATTAGCCTTAGTAGATGTTGTA
AGGGAGGTGACAATGTTTGTTTTCAAGATCAAAATGCCATCAGATGTTCGAGTTCAATTA
ATCAATGATTTAGCTGACATTGAGTACAGGTTGAGTTTTGGTTGCAATGATAAGTTGCAG
CTTGGATCACTTATTGCTTCATTTACACGTGCTCGAGCAGCGTTGGTTGCTGCTGCAAAG
TAG

Peptide Sequence

PEP ID

VIT_18s0001g02370.t01
PEP Infomation

pep chromosome:12X:18:2677244:2684335:-1 gene:VIT_18s0001g02370 transcript:VIT_18s0001g02370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDT
IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQ
IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI
IPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQ
STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVV
REVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAAAK

Transcript Sequence

Transcript ID

VIT_18s0001g02370.t01
Transcript Infomation

cdna chromosome:12X:18:2677244:2684335:-1 gene:VIT_18s0001g02370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTATTTGGCGCCTTCACAGAACCTCGGGAGAGAGACCCTAAGAGAATGGCGGAGGCAGTC
ACAGTAATGGACATCGACGAGGAAGACAACCATTTGCTGAAAGCAAACAAGGGCAAGTCT
GTCGTTGTCGGAGGTCCGCCGGATCGCAAAGCAACTCCGTGGGTAGAGAAGTACCGGCCA
CAGTCCCTTGCCGACGTTGCCGCTCATCGCGACATTGTCGATACCATCGATAGGCTCACG
AGTGAGAATAGATTGCCCCATCTACTACTGTATGGACCTCCCGGTACGGGTAAAACCTCA
ACTATTCTCGCAGTCGCTCGCAAGCTGTACGGAGAACAGTTCCATAATATGATTCTCGAG
TTGAATGCTTCCGATGATCGTGGGATAGATGTGGTGCGGCAGCAGATCCAAGATTTTGCT
AGCACTCAGAGCTTCTCCTTTGGTGCAAAGTCGTCCGTGAAGTTGGTTCTATTGGATGAG
GCAGATGCGATGACAAAGGATGCACAGTTTGCCTTGCGCCGGGTGATTGAGAAGTACACA
AAGAACACTAGGTTTGCACTAATTTGTAATCACGTCAACAAGATTATTCCAGCGCTACAG
TCAAGGTGTACTCGATTTCGGTTTGCCCCTCTTGATGCAGTTCATGTTACTGAGCGACTT
AAACATGTTATAAATGCTGAAAAACTTGATGTATCTGAGAGTGGCTTAGCAGCACTTGTA
CGGCTGAGCAGTGGTGACATGAGAAAGGCTTTGAACATTTTGCAGTCAACACATATGGCT
TCTCAGCAGATAACGGAGGAAGCTGTCTATCTGTGCACTGGAAATCCATTGCCTAAAGAC
ATTGAGCAAATTTCTTACTGGCTGCTGAATGAATCATTTGCAGCTAGTTTTGATCGAATA
TCTGAAGTCAAGATGAGGAAAGGATTAGCCTTAGTAGATGTTGTAAGGGAGGTGACAATG
TTTGTTTTCAAGATCAAAATGCCATCAGATGTTCGAGTTCAATTAATCAATGATTTAGCT
GACATTGAGTACAGGTTGAGTTTTGGTTGCAATGATAAGTTGCAGCTTGGATCACTTATT
GCTTCATTTACACGTGCTCGAGCAGCGTTGGTTGCTGCTGCAAAGTAGTTATGTTCTTGT
TTGTGGACATGTTAAGCTCTCATATCCTCTCACTATTTATGCATGTGGGTTGTTTTGTTA
AACAACACCACAAAAGTAAATAGTCTTAATGTTTTTGTCGGCTTGGAGTTAAAAAA