Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g02260.t01
CDS Infomation

cds chromosome:12X:18:2618439:2626112:1 gene:VIT_18s0001g02260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:E0CR38]
Sequence

ATGTCGATCTTCGAGTACAATGGCAGTGCGCTAATCGCCATGGTTGGCAAGAACTGCTTT
GCAATCGCCAGCGATCGCCGATTCGGCGTTCAGCTCCAGACCGTCGCTACCGATTTTCAG
AAAATTTACAGGATCCACGATCGGGTTTTTCTCGGTCTGTCCGGACTGGCTACCGATGCT
CAGACTCTATATCAACGGCTTGTTTTTCGGCACAAACTGTATCAGCTTCGAGAGGAGAGG
GATATGAAGCCCGAAACCTTTGCAAGCCTTGTATCTGCTCTTCTTTATGAGAAAAGGTTT
GGTCCATACTTCTGCCAGCCTGTGATTGCTGGATTGGGAGATGAAGACAAGCCATTCATT
TGCACAATGGATTCAATTGGAGCCAAGGAGCTTGCTAAAGATTTTGTTGTTGCTGGTACT
GCCTCTGAGTCTCTTTATGGTGCCTGCGAGGCCATGTTCAAGCCCGACATGGAACCTGAG
GAATTATTTGAGATCATCTCTCAAGCACTGCTCTCATCAGTAGATCGTGACTGCTTGAGT
GGTTGGGGAGGACATGTCTATGTTGTCACACCAACTGAAGTGAAGGAGAGGATCTTAAAA
GGAAGGATGGATTGA

Peptide Sequence

PEP ID

VIT_18s0001g02260.t01
PEP Infomation

pep chromosome:12X:18:2618439:2626112:1 gene:VIT_18s0001g02260 transcript:VIT_18s0001g02260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:E0CR38]
Sequence

MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI
CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCLS
GWGGHVYVVTPTEVKERILKGRMD

Transcript Sequence

Transcript ID

VIT_18s0001g02260.t01
Transcript Infomation

cdna chromosome:12X:18:2618439:2626112:1 gene:VIT_18s0001g02260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:E0CR38]
Sequence

AGGGAAGACGCTCCCACAGCATTTTAGTTTGGCTCTCGGAACTCAGTCGCATATTCATCG
TCACCGATGTCGATCTTCGAGTACAATGGCAGTGCGCTAATCGCCATGGTTGGCAAGAAC
TGCTTTGCAATCGCCAGCGATCGCCGATTCGGCGTTCAGCTCCAGACCGTCGCTACCGAT
TTTCAGAAAATTTACAGGATCCACGATCGGGTTTTTCTCGGTCTGTCCGGACTGGCTACC
GATGCTCAGACTCTATATCAACGGCTTGTTTTTCGGCACAAACTGTATCAGCTTCGAGAG
GAGAGGGATATGAAGCCCGAAACCTTTGCAAGCCTTGTATCTGCTCTTCTTTATGAGAAA
AGGTTTGGTCCATACTTCTGCCAGCCTGTGATTGCTGGATTGGGAGATGAAGACAAGCCA
TTCATTTGCACAATGGATTCAATTGGAGCCAAGGAGCTTGCTAAAGATTTTGTTGTTGCT
GGTACTGCCTCTGAGTCTCTTTATGGTGCCTGCGAGGCCATGTTCAAGCCCGACATGGAA
CCTGAGGAATTATTTGAGATCATCTCTCAAGCACTGCTCTCATCAGTAGATCGTGACTGC
TTGAGTGGTTGGGGAGGACATGTCTATGTTGTCACACCAACTGAAGTGAAGGAGAGGATC
TTAAAAGGAAGGATGGATTGACCTTTCTCCACAGAGCTGATAGTTGATCCCCTTCTATAT
CTGCATTTGGTTACCTGTTTTCTTCCTTCCCATCTGTGGCCTGCATTTGAAGTGGAAACC
TGTTATCATGTCTTTAGTGATTTGTGCTGACTTTTTCTGCAGTGCTCTAATTGATGTAAA
CTGATAAATTTTAAAGTTACATCTCCCCAGCAATTCCAGTGGAAGGATAGGTCCTTTTGA
TTTATAAAATTTGTATGCTATTGAATATTTCTTCCAAGAAAGACGCGTTACTACATGGAT
TTAGCCATTGTTTTA