Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g02170.t01
CDS Infomation

cds chromosome:12X:18_random:2543256:2556035:-1 gene:VIT_18s0001g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTTGGAGGGAACGTGAAAGAGAGAGTGAAGAGCGTAGTGGCGGTGGACCGCCCTTT
GGGCAGGTTCGGGTGCTTGTTGTGGGAGACTCTGGTGTGGGAAAAACTTCACTTGTCCAT
TTGATCATTAAAGGTTCTTCAATTTCCCGGCCTCCTCAAACAATTGGGTGTATGGTTGGT
ATAAAGCATCTCACATATGGAAGTTCTAGTAGCTCTTCCAACAGCAATAAAGGCAATACA
GAGAGGGATTTCTTTGTTGAACTTTGGGATGTTTCAGGACATGAGCGATACAAAGATTGT
CGGTCTCTTTTCTATTCACAAATCAATGGTATCATTTTTGTCCATGATCTCTCCCAAAAA
AGGACAAAAACAAGCTTGCAAAAGTGGGCTTCTGAAATTGCAGGAAATGGTACATTCTCA
GCTCCTCTAGGATCTGCTGGTCCTTGTGGCCTTCCTGTCCCATTCATTGTTATTGGTAAC
AAAGTAGATATTGCGACAAAGGAGGGCCAAAGAGGAAGCAGTGGCAATCTTGTTGATGTT
GCTCGTCAGTGGGTTGAGAAGCAGGGTTTGCTTCCATCTAGTGAGGAACTACCTCTGACA
GAGAGTTTTCCAGGAAGTGGGGGCCTTATTGCTGCTGCCAAAGAAGCAAGATTTGACAAG
GAAGCTGTGAAGAAGTTCTTTTTAATGTTGATCAGGAGAAGATATTTTTCAAATGAATTA
CCTGCACCAAACCCCTGGTCTAGTTCACCATTTGAAGGACCTGCCCCCCACTCAAGTAAT
AATTTGAGTGATGATGATGTCTTCCACATGAATACAAGTTTAAGCGGCGACCCTTACAAG
TACAACATTCTTCCCCCACTCCCAGCTCGGAATTATATGCCTCCATCCGCTCAACGTCCT
CAGCAGCCAGTCTCCATTTCTGACAACTACAACCTCCCAAGATTCACACGAACTGAATCT
CCAAATAGCAGCAACTCAAGATCAAAGCGGGCAGATATTAATATCTGA

Peptide Sequence

PEP ID

VIT_18s0001g02170.t01
PEP Infomation

pep chromosome:12X:18_random:2543256:2556035:-1 gene:VIT_18s0001g02170 transcript:VIT_18s0001g02170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFWRERERESEERSGGGPPFGQVRVLVVGDSGVGKTSLVHLIIKGSSISRPPQTIGCMVG
IKHLTYGSSSSSSNSNKGNTERDFFVELWDVSGHERYKDCRSLFYSQINGIIFVHDLSQK
RTKTSLQKWASEIAGNGTFSAPLGSAGPCGLPVPFIVIGNKVDIATKEGQRGSSGNLVDV
ARQWVEKQGLLPSSEELPLTESFPGSGGLIAAAKEARFDKEAVKKFFLMLIRRRYFSNEL
PAPNPWSSSPFEGPAPHSSNNLSDDDVFHMNTSLSGDPYKYNILPPLPARNYMPPSAQRP
QQPVSISDNYNLPRFTRTESPNSSNSRSKRADINI

Transcript Sequence

Transcript ID

VIT_18s0001g02170.t01
Transcript Infomation

cdna chromosome:12X:18_random:2543256:2556035:-1 gene:VIT_18s0001g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGAGAAGGAGAACCGAAATTTACCTGAGAATTTGGAATGGGAGGAAAAACCAGAGATT
TCAAAAACTGGGTTCAGCTATGAAGAGGATCGATGGTCTTCCTCATTGATTTCTTGAATT
GGGTTGTCGATTTTTTCTCAAATCTTAGCCTTTTTTGTGCATTATAAACTGGAATTGGCA
ATAGCCATCTGGACCTTTTGCTGTTCTTCATTGAAACAGTGGTTTTTTTGGGCGCCCAAT
TGATCTAGAATCGTCCAAAACTCGTGGGTCTTTTTTATTTTGATCAGAAGGCAAATTGGG
GTTAGGGTTTTGGGAGAAAGATGTTTTGGAGGGAACGTGAAAGAGAGAGTGAAGAGCGTA
GTGGCGGTGGACCGCCCTTTGGGCAGGTTCGGGTGCTTGTTGTGGGAGACTCTGGTGTGG
GAAAAACTTCACTTGTCCATTTGATCATTAAAGGTTCTTCAATTTCCCGGCCTCCTCAAA
CAATTGGGTGTATGGTTGGTATAAAGCATCTCACATATGGAAGTTCTAGTAGCTCTTCCA
ACAGCAATAAAGGCAATACAGAGAGGGATTTCTTTGTTGAACTTTGGGATGTTTCAGGAC
ATGAGCGATACAAAGATTGTCGGTCTCTTTTCTATTCACAAATCAATGGTATCATTTTTG
TCCATGATCTCTCCCAAAAAAGGACAAAAACAAGCTTGCAAAAGTGGGCTTCTGAAATTG
CAGGAAATGGTACATTCTCAGCTCCTCTAGGATCTGCTGGTCCTTGTGGCCTTCCTGTCC
CATTCATTGTTATTGGTAACAAAGTAGATATTGCGACAAAGGAGGGCCAAAGAGGAAGCA
GTGGCAATCTTGTTGATGTTGCTCGTCAGTGGGTTGAGAAGCAGGGTTTGCTTCCATCTA
GTGAGGAACTACCTCTGACAGAGAGTTTTCCAGGAAGTGGGGGCCTTATTGCTGCTGCCA
AAGAAGCAAGATTTGACAAGGAAGCTGTGAAGAAGTTCTTTTTAATGTTGATCAGGAGAA
GATATTTTTCAAATGAATTACCTGCACCAAACCCCTGGTCTAGTTCACCATTTGAAGGAC
CTGCCCCCCACTCAAGTAATAATTTGAGTGATGATGATGTCTTCCACATGAATACAAGTT
TAAGCGGCGACCCTTACAAGTACAACATTCTTCCCCCACTCCCAGCTCGGAATTATATGC
CTCCATCCGCTCAACGTCCTCAGCAGCCAGTCTCCATTTCTGACAACTACAACCTCCCAA
GATTCACACGAACTGAATCTCCAAATAGCAGCAACTCAAGATCAAAGCGGGCAGATATTA
ATATCTGAATAGGCAAGGCTTTTCTGCAAACTAGATTCAAGGCTCAAGGAAAAAGATTTG
CTTGTTGGATCAGAAAGGAGCAACTAGATTGTCTTTTTGTTGATTCATATTTGGGTTCCC
AGAGGGGTTTCCCTCTGAGTAAAGCTGATTTCTTCTCATTCTGTTGGTTGCTTGATCTCT
GTATGCATCCCATTTTTGTGCCCCTCTAGTTTGTGATGTGGGTGACTGTATAATGATTGA
TTACCTCATTTGAAATTAATGGCAATTAATTTTTACCCA