Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g02060.t01
CDS Infomation

cds chromosome:12X:18:2479868:2484109:-1 gene:VIT_18s0001g02060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGACCCAGAATCGCCGTTCCTCAGTTTCTTCGTCGTCGTCGTCGTCGTCCTTGATG
AAGCGGTCGTCGTCGGATAATCATGGTAAGGTTACGACGGTGCCGTCGCATTTGGCCAAG
AAGCGGCCGCCTCTCAGTAACATTACCAACCAAAAGAATGCTTCTCTGAGTGGGTTAAAA
AGCTCGGCTGCGGTCGGGACTATGGTACCATGTGCGGAAAAAATTTCTAAAGCAAAGAGG
GGATCTTCTAAAATTTCCCGAAGTGTAGGCATCACTGGAAATACATCATCTGCTTCCTTG
AATGTGAAACCAACTGCAGTTATTCCCTGTAAGGACACATCTCTTCCCAAAAGTGATGGA
ACTGCCTCTACTGTTACCGCCCTTCCAGATCCTTGCAGCTTGGATGTTTCACCGAATCGA
TCCGATGGTATTTCAGCTTCCATGGATGAGACGATGTCTACTTGTGATTCTTTCAAGAGC
CCAGAAGTTGAATATATGGACGTTGATGATTTAGCGGTTAATTCTATTGAGAGGAAGACA
TGTAGCAAGCTCTACATTTCAGAGCATGTGGAAGCAGAAGGAAATATTTGCAGTGAAGAT
ATACATGTGGAGACAGAAACAAATGGTAAAATTGCTGATATCGATGACAATTTCGGGGAT
CCACAGTTCTGCGCAACCATGGCTTGTGACATCTACAAGCACCTGCGTGCATCTGAGGCA
AGGAAGAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAAGACGTTAATGCAAGCATG
AGGTCAATTCTCATTGATTGGCTTGTGGAGGTTGCTGAAGAGTACAGGCTTGTGCCTGAT
ACATTATACTTGACAGTGAACTTCATAGATCGGTATCTTTCTGGGAATGTGATGAACAGG
CAACAGCTACAATTGCTTGGTGTTGCATGCATGATGATTGCTGCCAAGTATGAAGAGATT
TGTGCACCCCAGGTGGAAGAATTCTGTTACATAACTGATAACACCTATTTCAAGGAGGAG
GTTTTGCAAATGGAATCTTCTGTCCTAAATTACTTAAAATTTGAAATGACAGCTCCAACA
GCTAAATGTTTTTTGAGGCGATTTGTTCGAGCTGCTCAAGGAATGAACGAGGTTCCATCG
TTGCAGCTCGAGTGCTTGGCGAACTATATAGCCGAGCTATCCCTTCTGGAGTACAGTATG
CTCTGTTATGCTCCATCACTTATAGCGGCTTCAGCAATTTTCTTGGCCAACTATATTCTT
CTCCCTTCAAAGAGACCTTGGAATTCTACCTTGAGGCACTACACACTCTACCAGCCCTCT
GATTTGTGTGATTGTGTTAAGGCTCTTCATCGCCTATGCTGTAACAACCACAATTCTAGT
TTACCTGCAATCAGGGAGAAATACAGTCAGCACAAGTACAAATTTGTGGCGAAGAAGTAC
TGCCCTCCTTCCATACCTTCAGAGCTTTTCCACAACCTAAGCAACTAA

Peptide Sequence

PEP ID

VIT_18s0001g02060.t01
PEP Infomation

pep chromosome:12X:18:2479868:2484109:-1 gene:VIT_18s0001g02060 transcript:VIT_18s0001g02060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSTQNRRSSVSSSSSSSSLMKRSSSDNHGKVTTVPSHLAKKRPPLSNITNQKNASLSGLK
SSAAVGTMVPCAEKISKAKRGSSKISRSVGITGNTSSASLNVKPTAVIPCKDTSLPKSDG
TASTVTALPDPCSLDVSPNRSDGISASMDETMSTCDSFKSPEVEYMDVDDLAVNSIERKT
CSKLYISEHVEAEGNICSEDIHVETETNGKIADIDDNFGDPQFCATMACDIYKHLRASEA
RKRPSTDFMERIQKDVNASMRSILIDWLVEVAEEYRLVPDTLYLTVNFIDRYLSGNVMNR
QQLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPT
AKCFLRRFVRAAQGMNEVPSLQLECLANYIAELSLLEYSMLCYAPSLIAASAIFLANYIL
LPSKRPWNSTLRHYTLYQPSDLCDCVKALHRLCCNNHNSSLPAIREKYSQHKYKFVAKKY
CPPSIPSELFHNLSN

Transcript Sequence

Transcript ID

VIT_18s0001g02060.t01
Transcript Infomation

cdna chromosome:12X:18:2479868:2484109:-1 gene:VIT_18s0001g02060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAAACATTTTCAAAAATTCATGACTTAAACCCTAGTTGCTTCAAAAGATTCAAAGATT
TGAATCCCCTTCTTTTTCTCCTTTATCTGGTTTGCTTTGTTCATTTTGAACCAGATAGAG
AGAGGGGCTCTTCAGCTATGTCGACCCAGAATCGCCGTTCCTCAGTTTCTTCGTCGTCGT
CGTCGTCGTCCTTGATGAAGCGGTCGTCGTCGGATAATCATGGTAAGGTTACGACGGTGC
CGTCGCATTTGGCCAAGAAGCGGCCGCCTCTCAGTAACATTACCAACCAAAAGAATGCTT
CTCTGAGTGGGTTAAAAAGCTCGGCTGCGGTCGGGACTATGGTACCATGTGCGGAAAAAA
TTTCTAAAGCAAAGAGGGGATCTTCTAAAATTTCCCGAAGTGTAGGCATCACTGGAAATA
CATCATCTGCTTCCTTGAATGTGAAACCAACTGCAGTTATTCCCTGTAAGGACACATCTC
TTCCCAAAAGTGATGGAACTGCCTCTACTGTTACCGCCCTTCCAGATCCTTGCAGCTTGG
ATGTTTCACCGAATCGATCCGATGGTATTTCAGCTTCCATGGATGAGACGATGTCTACTT
GTGATTCTTTCAAGAGCCCAGAAGTTGAATATATGGACGTTGATGATTTAGCGGTTAATT
CTATTGAGAGGAAGACATGTAGCAAGCTCTACATTTCAGAGCATGTGGAAGCAGAAGGAA
ATATTTGCAGTGAAGATATACATGTGGAGACAGAAACAAATGGTAAAATTGCTGATATCG
ATGACAATTTCGGGGATCCACAGTTCTGCGCAACCATGGCTTGTGACATCTACAAGCACC
TGCGTGCATCTGAGGCAAGGAAGAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAAG
ACGTTAATGCAAGCATGAGGTCAATTCTCATTGATTGGCTTGTGGAGGTTGCTGAAGAGT
ACAGGCTTGTGCCTGATACATTATACTTGACAGTGAACTTCATAGATCGGTATCTTTCTG
GGAATGTGATGAACAGGCAACAGCTACAATTGCTTGGTGTTGCATGCATGATGATTGCTG
CCAAGTATGAAGAGATTTGTGCACCCCAGGTGGAAGAATTCTGTTACATAACTGATAACA
CCTATTTCAAGGAGGAGGTTTTGCAAATGGAATCTTCTGTCCTAAATTACTTAAAATTTG
AAATGACAGCTCCAACAGCTAAATGTTTTTTGAGGCGATTTGTTCGAGCTGCTCAAGGAA
TGAACGAGGTTCCATCGTTGCAGCTCGAGTGCTTGGCGAACTATATAGCCGAGCTATCCC
TTCTGGAGTACAGTATGCTCTGTTATGCTCCATCACTTATAGCGGCTTCAGCAATTTTCT
TGGCCAACTATATTCTTCTCCCTTCAAAGAGACCTTGGAATTCTACCTTGAGGCACTACA
CACTCTACCAGCCCTCTGATTTGTGTGATTGTGTTAAGGCTCTTCATCGCCTATGCTGTA
ACAACCACAATTCTAGTTTACCTGCAATCAGGGAGAAATACAGTCAGCACAAGTACAAAT
TTGTGGCGAAGAAGTACTGCCCTCCTTCCATACCTTCAGAGCTTTTCCACAACCTAAGCA
ACTAAGCACTATGGCGTAATTTTTCCAATGTTCTGTTGGATTAGCTTCTGTGTGTATGGT
GTAGGCTGCTTGTTCTAGTTCCAACTGCTGTAATCCCCTTTCTGATAACAACACCTGTTT
TTGGAATTTTGACTCCGACGTTAGGGTGGTGTCCTCCCCTAGATCATAATCTTGTACAAT
TGAGTTTTCTTATTTAGCTTTTGTAGCTCATTTCAATGTCCAACTTCTGTACAGATTTAT
CTTTTATGTCATTCATCTCCTTGTTCCCTTTAA