Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_18s0001g01990.t01
CDS Infomation	cds chromosome:12X:18_random:2423747:2464543:-1 gene:VIT_18s0001g01990 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F6HJC9]
Sequence	ATGAGGAGTGGCACCGCTGATCCTCAATCAGAGGGCGATCTTGCTCTTGATCTAATTTCC ACCCTTCAATCTCAACTGCTCTCTCTCCGCAACAGAGTACAGGAATTAGAGGCTGAGAAT GCAAAGCTATCATCTCAAATTTCAAGTTGCCACTGTCATAAGATAAGGGAGAAACTTGAT TCTATCAGCCTGGTCCAGCAAAGTGATGAATTAAAGCCAGGTGGTGATGAGACCAGAAAG AAAAAATTGAAGGGGAAAATACCAGGCACTAACATGAGGACAATGAATCACATTTCCAAG AGATATGTGGCTCTAAAAGTCATGTATTTTGGTCCAAGGTTTTATGGTTTTGCTTCGGAA GCACACATGGATCCAACTGTTGAGTCTGAAATTTTCAAGGCTCTTGAGAAGACATGGCTT GCAGTTGGGGACAAGAAGGAATTACAGTATTCAAGATGTGGTAGAACAGACAAGGGAGTA TCCTCTGTTGGGCAAGTGATTGCTCTATTTTTACGATCAAACCTTAAGGAAATTGGTGCA AGGGAAGAAAATTCTAAGGAAGTTGTTCCAGAAGAACAATATGAAGGAGAAATTGATTAT ATGAGGGTACTCAATAGAGTCCTTCCTAAAGATATTCGAGTTATGGGCTGGTGTCCTGTT CCAATTGGTTTCCATGCAAGGTTTAGCTGTTTGAGCAGAGAATATAAGTACTTTTTCTGG AGAGGAAATCTGAATATATTGGCAATGGAGAGTGCTGGTAAGAAATTTGTTGGGGAACAT GACTTCCGAAATTTCTGTAAGATGGATGCAGTGAATGTTCACAACTACAGACGACATATC ATTTCATTTGAAATTGCTCCTACCAATAATAGATATGATGGAAATCAACTTTGGGCAATA AAAATTAAAGGCAGTGCTTTCCTATGGCACCAGGTCCGGTGCATGGTTGCTGTACTATTT ATGATTGGCCAAGGTCTTGAATCCCCTGATGTGGTAGATGCATTATTGGATACAGAAAGG ACATCAAGAAAACCTCAATACGCCATGGCCCCTGAGATTCCATTGGTTCTTGAATCCTGT GAATTTGAAGGTCTCAAGTTTATTTGTTCATCAGATGCTGGCCAAGCTTTACGCATGCAC TTGGAAAATGAGTGCCGAACTTACCAGCTCCAAGCTGCAATCTTTCATGAGGCTCTGCTA TCCTGTTTGCCTTCAGCAAATAGTGCCGAAAAACAGAATTCACTAAATAATGGAACCATC AAGAAGGAGGCTGCTCATATTGATCTAATGTCACGGCCAACTGAGCCATCATATGAAGAG CGACGTGCCAAATTTAACTCAAGCACATGA

Peptide Sequence

PEP ID	VIT_18s0001g01990.t01
PEP Infomation	pep chromosome:12X:18_random:2423747:2464543:-1 gene:VIT_18s0001g01990 transcript:VIT_18s0001g01990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F6HJC9]
Sequence	MRSGTADPQSEGDLALDLISTLQSQLLSLRNRVQELEAENAKLSSQISSCHCHKIREKLD SISLVQQSDELKPGGDETRKKKLKGKIPGTNMRTMNHISKRYVALKVMYFGPRFYGFASE AHMDPTVESEIFKALEKTWLAVGDKKELQYSRCGRTDKGVSSVGQVIALFLRSNLKEIGA REENSKEVVPEEQYEGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFW RGNLNILAMESAGKKFVGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAI KIKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESC EFEGLKFICSSDAGQALRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQNSLNNGTI KKEAAHIDLMSRPTEPSYEERRAKFNSST

Transcript Sequence

Transcript ID	VIT_18s0001g01990.t01
Transcript Infomation	cdna chromosome:12X:18_random:2423747:2464543:-1 gene:VIT_18s0001g01990 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F6HJC9]
Sequence	TCTTTTTTTCTTTTGGTTTTGAGTACTTTCAAAATTCTTACTACTGTCCTTTAATTTTGT TTTATACGGCTAAAAAAAAGGAATATTTTGGGGAAAAAATTATATAAAATATTAAAATTT GGAACGAATTAGTCGTTCAGTTATTTTCTTCCCCAAAACTCGTCGTTTTGTTCGGAAGTG TTTGGCTCTCGAGGCATCGTCGCAGTTACGGGAGCGACCACCATGAGGAGTGGCACCGCT GATCCTCAATCAGAGGGCGATCTTGCTCTTGATCTAATTTCCACCCTTCAATCTCAACTG CTCTCTCTCCGCAACAGAGTACAGGAATTAGAGGCTGAGAATGCAAAGCTATCATCTCAA ATTTCAAGTTGCCACTGTCATAAGATAAGGGAGAAACTTGATTCTATCAGCCTGGTCCAG CAAAGTGATGAATTAAAGCCAGGTGGTGATGAGACCAGAAAGAAAAAATTGAAGGGGAAA ATACCAGGCACTAACATGAGGACAATGAATCACATTTCCAAGAGATATGTGGCTCTAAAA GTCATGTATTTTGGTCCAAGGTTTTATGGTTTTGCTTCGGAAGCACACATGGATCCAACT GTTGAGTCTGAAATTTTCAAGGCTCTTGAGAAGACATGGCTTGCAGTTGGGGACAAGAAG GAATTACAGTATTCAAGATGTGGTAGAACAGACAAGGGAGTATCCTCTGTTGGGCAAGTG ATTGCTCTATTTTTACGATCAAACCTTAAGGAAATTGGTGCAAGGGAAGAAAATTCTAAG GAAGTTGTTCCAGAAGAACAATATGAAGGAGAAATTGATTATATGAGGGTACTCAATAGA GTCCTTCCTAAAGATATTCGAGTTATGGGCTGGTGTCCTGTTCCAATTGGTTTCCATGCA AGGTTTAGCTGTTTGAGCAGAGAATATAAGTACTTTTTCTGGAGAGGAAATCTGAATATA TTGGCAATGGAGAGTGCTGGTAAGAAATTTGTTGGGGAACATGACTTCCGAAATTTCTGT AAGATGGATGCAGTGAATGTTCACAACTACAGACGACATATCATTTCATTTGAAATTGCT CCTACCAATAATAGATATGATGGAAATCAACTTTGGGCAATAAAAATTAAAGGCAGTGCT TTCCTATGGCACCAGGTCCGGTGCATGGTTGCTGTACTATTTATGATTGGCCAAGGTCTT GAATCCCCTGATGTGGTAGATGCATTATTGGATACAGAAAGGACATCAAGAAAACCTCAA TACGCCATGGCCCCTGAGATTCCATTGGTTCTTGAATCCTGTGAATTTGAAGGTCTCAAG TTTATTTGTTCATCAGATGCTGGCCAAGCTTTACGCATGCACTTGGAAAATGAGTGCCGA ACTTACCAGCTCCAAGCTGCAATCTTTCATGAGGCTCTGCTATCCTGTTTGCCTTCAGCA AATAGTGCCGAAAAACAGAATTCACTAAATAATGGAACCATCAAGAAGGAGGCTGCTCAT ATTGATCTAATGTCACGGCCAACTGAGCCATCATATGAAGAGCGACGTGCCAAATTTAAC TCAAGCACATGA