Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01820.t01
CDS Infomation

cds chromosome:12X:18_random:2336910:2342380:-1 gene:VIT_18s0001g01820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGTGACAGTGGGTGATTCGTCGCCGTGCTTTGACGGAGACGAAAAGTCTGCGTGG
CCACCCGGGTTCCGATTCCATCCCACCGATGAAGAGCTGGTTCTGTATTATCTGAAGAAG
AAGATCTGCCGGCGACGGCTGAAGCTCGATATCATCGCCGAGGTCGATGTCTACAAGTGG
GACCCCGAGGATTTGCCTGGACTATCTAAATTGAAGACAGGAGATAGGCAATGGTTCTTT
TTTAGCCCCAGAGACAGGAAGTACCCTAATGGAGCTAGGTCTAATAGGGCAACCAGGCAT
GGATACTGGAAAGCAACAGGAAAGGATCGAACTATTAGCTGTAATATTCGGTCAGTTGGT
GTGAAGAAGACCTTGGTTTTCTATAAAGGCCGTGCTCCAAGTAAAGAGCGCACAGACTGG
GTGATGCATGAGTATACAATGGATGAAGAGGAGCTCAAGAGATGCCCGAATGTGCAGGAT
TATTATGCACTTTATAAGGTCTTCAAGAAGAGTGGACCTGGTCCCAAAAATGGTGAGCAA
TACGGGGCTCCATTTAAAGAAGAGGAATGGGCTGACGAAGATGACCTAGATGTTAGTAAC
TACTCTGTTGAAGAGACTCCTCCAGAGCAGTTGAATGGCGTTATTTCTGTCAATAATTCC
AAACCTAATGGGCAAGACTGTCAAGCAGATGCTTGGGATGACATCTGGAAAGGACTTGCA
GAAGCACCTCCAGTTGTTCCTCTGCGTGTTGATGATTATGTTAATCTACTAGCTCAGGTT
ATTGGTGAAGAAGAAGCTCAAACTCCTTTGGTGGATTCATCACTCAATGGAGCTTTCGTT
GCTGATCCAATAAGCACAGTATTAACCCCTACCTCTCAGCAGTATGCTGTGCCAGAGAAC
GTTGAGTTTACACAATCAGCCTCCTCTCAGTTGCAATTGCACGAGGCACCTGAGGTCACA
TCTGCTCCTAACATTAGTGAGCAGGAACGTGGATTAAGTGAGGAGGACTTTCTAGAAATG
GATGATCTCCTTGGTCCAGAACCCATTCCTCAAAACTATGAAAAAACTGAGGAGAACTTG
CAGTTTGAAGGCGATGGATTGAGCATACTTGACCTGTACCATGATGCAGCCATGTTTCTT
CGTGACATTGGCCCTATTGATCAAGGAACGGTTCCGCATCCATATTTGAATACCATTGAG
AATGAGATGGTGAACCAGTTGAATTACCAGCTGCAGCCCCATTCTGTTGGTGCAGATCAG
ATTAGTGGTCAGCTGTGGACACTCGATCAAAGTGTCTGTACCTCAGCAGAATCTATTCAG
GGGATCATTGGGCAGCCAACCTCAGGTGTTGTATATGCCAGCAGTTCTACAAATGTTCCC
ACCGAAGGAAATCAAAACATGAATGGCGAAGGGGGTAACGGTGCAGGGAACCGATTCACT
TCTGCTCTATGGTCCTTTGTGGAGTCAATACCTACCACACCTGCATCAGCTTCAGAAAAT
GCGTTGGTAAATCGGGCATTGGTGAGAATGTCTAGCTTTAGTAGGATGAGAATGAATGCA
TTGAACACAAATGCAGGTAATGGAGGTGCAGCCACATGGAAGGGAGGTATAAATAAGGGG
GGATTCATCATTCTTTCAGTTATTGGAGCACTGATAGCTATATTCTGGGTCCTAATGCTA
GGACCTGTGAAGATGTTAGGAAGATGCCTCCCCTCATGA

Peptide Sequence

PEP ID

VIT_18s0001g01820.t01
PEP Infomation

pep chromosome:12X:18_random:2336910:2342380:-1 gene:VIT_18s0001g01820 transcript:VIT_18s0001g01820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKVTVGDSSPCFDGDEKSAWPPGFRFHPTDEELVLYYLKKKICRRRLKLDIIAEVDVYKW
DPEDLPGLSKLKTGDRQWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRTISCNIRSVG
VKKTLVFYKGRAPSKERTDWVMHEYTMDEEELKRCPNVQDYYALYKVFKKSGPGPKNGEQ
YGAPFKEEEWADEDDLDVSNYSVEETPPEQLNGVISVNNSKPNGQDCQADAWDDIWKGLA
EAPPVVPLRVDDYVNLLAQVIGEEEAQTPLVDSSLNGAFVADPISTVLTPTSQQYAVPEN
VEFTQSASSQLQLHEAPEVTSAPNISEQERGLSEEDFLEMDDLLGPEPIPQNYEKTEENL
QFEGDGLSILDLYHDAAMFLRDIGPIDQGTVPHPYLNTIENEMVNQLNYQLQPHSVGADQ
ISGQLWTLDQSVCTSAESIQGIIGQPTSGVVYASSSTNVPTEGNQNMNGEGGNGAGNRFT
SALWSFVESIPTTPASASENALVNRALVRMSSFSRMRMNALNTNAGNGGAATWKGGINKG
GFIILSVIGALIAIFWVLMLGPVKMLGRCLPS

Transcript Sequence

Transcript ID

VIT_18s0001g01820.t01
Transcript Infomation

cdna chromosome:12X:18_random:2336910:2342380:-1 gene:VIT_18s0001g01820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATAGGAAGTTTCCCTTCGCCCACCACCTCGCTCTCTATCCTATTACTTCTTTGACTATG
CCCTCTCTTCTTCCAAAACTCGCTCTCTTTTAGGGTTTTCTCATTCCCGATTCTCCCCAT
TTCCATCTTCTATTCTCACTCTGTTTCAGTAGAATCTGACCCGAATCGATGAAGGTGACA
GTGGGTGATTCGTCGCCGTGCTTTGACGGAGACGAAAAGTCTGCGTGGCCACCCGGGTTC
CGATTCCATCCCACCGATGAAGAGCTGGTTCTGTATTATCTGAAGAAGAAGATCTGCCGG
CGACGGCTGAAGCTCGATATCATCGCCGAGGTCGATGTCTACAAGTGGGACCCCGAGGAT
TTGCCTGGACTATCTAAATTGAAGACAGGAGATAGGCAATGGTTCTTTTTTAGCCCCAGA
GACAGGAAGTACCCTAATGGAGCTAGGTCTAATAGGGCAACCAGGCATGGATACTGGAAA
GCAACAGGAAAGGATCGAACTATTAGCTGTAATATTCGGTCAGTTGGTGTGAAGAAGACC
TTGGTTTTCTATAAAGGCCGTGCTCCAAGTAAAGAGCGCACAGACTGGGTGATGCATGAG
TATACAATGGATGAAGAGGAGCTCAAGAGATGCCCGAATGTGCAGGATTATTATGCACTT
TATAAGGTCTTCAAGAAGAGTGGACCTGGTCCCAAAAATGGTGAGCAATACGGGGCTCCA
TTTAAAGAAGAGGAATGGGCTGACGAAGATGACCTAGATGTTAGTAACTACTCTGTTGAA
GAGACTCCTCCAGAGCAGTTGAATGGCGTTATTTCTGTCAATAATTCCAAACCTAATGGG
CAAGACTGTCAAGCAGATGCTTGGGATGACATCTGGAAAGGACTTGCAGAAGCACCTCCA
GTTGTTCCTCTGCGTGTTGATGATTATGTTAATCTACTAGCTCAGGTTATTGGTGAAGAA
GAAGCTCAAACTCCTTTGGTGGATTCATCACTCAATGGAGCTTTCGTTGCTGATCCAATA
AGCACAGTATTAACCCCTACCTCTCAGCAGTATGCTGTGCCAGAGAACGTTGAGTTTACA
CAATCAGCCTCCTCTCAGTTGCAATTGCACGAGGCACCTGAGGTCACATCTGCTCCTAAC
ATTAGTGAGCAGGAACGTGGATTAAGTGAGGAGGACTTTCTAGAAATGGATGATCTCCTT
GGTCCAGAACCCATTCCTCAAAACTATGAAAAAACTGAGGAGAACTTGCAGTTTGAAGGC
GATGGATTGAGCATACTTGACCTGTACCATGATGCAGCCATGTTTCTTCGTGACATTGGC
CCTATTGATCAAGGAACGGTTCCGCATCCATATTTGAATACCATTGAGAATGAGATGGTG
AACCAGTTGAATTACCAGCTGCAGCCCCATTCTGTTGGTGCAGATCAGATTAGTGGTCAG
CTGTGGACACTCGATCAAAGTGTCTGTACCTCAGCAGAATCTATTCAGGGGATCATTGGG
CAGCCAACCTCAGGTGTTGTATATGCCAGCAGTTCTACAAATGTTCCCACCGAAGGAAAT
CAAAACATGAATGGCGAAGGGGGTAACGGTGCAGGGAACCGATTCACTTCTGCTCTATGG
TCCTTTGTGGAGTCAATACCTACCACACCTGCATCAGCTTCAGAAAATGCGTTGGTAAAT
CGGGCATTGGTGAGAATGTCTAGCTTTAGTAGGATGAGAATGAATGCATTGAACACAAAT
GCAGGTAATGGAGGTGCAGCCACATGGAAGGGAGGTATAAATAAGGGGGGATTCATCATT
CTTTCAGTTATTGGAGCACTGATAGCTATATTCTGGGTCCTAATGCTAGGACCTGTGAAG
ATGTTAGGAAGATGCCTCCCCTCATGAGTCATGGGTAATGAATAAAACTAAGTATTTTAT
GTAAATGAAAAGATGAAGACGAAAGATGAAGATGGGTGTTTCTTGTTATGAGACTCCTTA
GCCAGATTCAAATTTTAAAGCTCTCAGACGCAATGGGAGAAATTTTATTTGGCAGTATAT