Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01800.t01
CDS Infomation

cds chromosome:12X:18_random:2318221:2332606:-1 gene:VIT_18s0001g01800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCTTCTCAACACCGCTGCGTTTTTGTTGGGAACATACCCTATGACGCTACTGAA
GAACAGCTTATTCAAATCTGCGAGGAGGTCGGTCCAGTCGTGTCCTTCAGATTGGTTATT
GATCGAGAAACAGGGAAGCCAAAAGGTTATGGATTCTGTGAGTATAAGGATGAAGAGACA
GCATTAAGTGCTCGTCGTAATCTTCAGGGCTATGAGATCAATGGCCGGCAATTACGAGTC
GATTTTGCTGAAAATGATAAAGGTGCTGACCGAAATAGAGAACAGGGTCGTGGTGGGCCT
GGGATGGTTGCTAATGTTGAACCTCAAAAACAAGTGGGTGGACCAGCAATCCTTGGGGAT
GCTGCTCTGCATCAGCCAGTTGGTCTTCCATTGGCTATGGCTGCTTCATCTGTCATGGCA
GGAGCTCTGGGAGGTGCTCAGGCTGGTAGCAAGTCCAATCAAAATGGTTTTCAGAGTCAG
GCAATGTTGGGAAGTGATCCTTTAACTCTTCATCTAGCAAAAATGTCTAGAAACCAGCTG
AATGAGGTCATTTCTGACCTGAAGGTAATGGCTACAAAAAACAAGGAATTAGCAAGACAG
CTACTGCTCACAAGCCCACAGTTGCCAAAAGCTCTTTTTCAGGCGCAGATAATGCTAGGA
ATGGTGACTCCTCAAGTGTTGCAGATGCCTAATATTCGGCAGGCTTCAGTTCCACCCACA
CAGCCTGTGTTACAAGATGGTCAACAGGGTCAGCAGCTAGCAGTTCAAACTCTTAGTGGG
CTACCCCCTCTTGCACAGAGCAAGATGCAGCTTGGGTTGATGCCCAAAGGACAAGAAGGC
CAAGTGTCTGCCATGCCTCATAATTCTTTGGTTCATAGCCAGTTTTCTGCACTTCCACAA
CAGCCGGCACAGCCTCAAATTCAGCTTCCACCCCAAGGCCACAACCAAGCTCTACAACAA
GCCACATTTGCTGGACAGTCAGGAGTTACGGCGCTTCCATCTGTACGCCCACAGCCGCCA
GCCAAATTGCCTGTTAGGCCACAAATTCAGGTGGCATCTTCCTCTTCTTTGAAGCATCAA
ATGCAACCCCCTTTGTTACAACAACCAGGACAGTTTGGATCTGCAAAATCAGGGAATAAT
AGTCAGCTGGTTATTCCAAATGCAACTCTTCGACCTACACTTATGACTCGTCCTTCATTC
CCAGATTCAGGCTTTCAGCCTGGTTCCTCAACATTTTCGAGCATTCCGGAGACAACTAAT
AACAATGCTGATAGATCTTCTCAAGTTACTAATAACACCTATTCAAACATGCCTTCGGGG
TTATCTATGAAAAAAAGCATGGCCCGTGATACTTCTGAACCAATGAATCACCCTTCAAAA
ATGGTGAAATTGGATGATGGACGGAGGGCCCCTTTTTCTACTGTGGGTTTGAATTTATCT
ACCAGTTCTGCATCTGCATCTGCATCTGGACCATCCCAAGTTCTTGGAATTGGCTCAGTC
TCTGCAAACCAAATAAGTAAAGCAGAAGAAGTGCAACACATGGATAAGAAGGCCCCTCAG
GAAATGACAAAGGGATATATTGATAGAAAAAAGGAGTACAAGAGAAGGATGAAGAATCCT
CCCACCAAAGAAAACTAA

Peptide Sequence

PEP ID

VIT_18s0001g01800.t01
PEP Infomation

pep chromosome:12X:18_random:2318221:2332606:-1 gene:VIT_18s0001g01800 transcript:VIT_18s0001g01800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGMVANVEPQKQVGGPAILGD
AALHQPVGLPLAMAASSVMAGALGGAQAGSKSNQNGFQSQAMLGSDPLTLHLAKMSRNQL
NEVISDLKVMATKNKELARQLLLTSPQLPKALFQAQIMLGMVTPQVLQMPNIRQASVPPT
QPVLQDGQQGQQLAVQTLSGLPPLAQSKMQLGLMPKGQEGQVSAMPHNSLVHSQFSALPQ
QPAQPQIQLPPQGHNQALQQATFAGQSGVTALPSVRPQPPAKLPVRPQIQVASSSSLKHQ
MQPPLLQQPGQFGSAKSGNNSQLVIPNATLRPTLMTRPSFPDSGFQPGSSTFSSIPETTN
NNADRSSQVTNNTYSNMPSGLSMKKSMARDTSEPMNHPSKMVKLDDGRRAPFSTVGLNLS
TSSASASASGPSQVLGIGSVSANQISKAEEVQHMDKKAPQEMTKGYIDRKKEYKRRMKNP
PTKEN

Transcript Sequence

Transcript ID

VIT_18s0001g01800.t01
Transcript Infomation

cdna chromosome:12X:18_random:2318221:2332606:-1 gene:VIT_18s0001g01800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGAGAGGAGGAGGAGGAAGAAGAAGAAGCTGAAGCTCTGCTTCACCTTCTTCTTATGAC
GACGTATTCATTCTTCAGTCATGGCCTCTTCTCAACACCGCTGCGTTTTTGTTGGGAACA
TACCCTATGACGCTACTGAAGAACAGCTTATTCAAATCTGCGAGGAGGTCGGTCCAGTCG
TGTCCTTCAGATTGGTTATTGATCGAGAAACAGGGAAGCCAAAAGGTTATGGATTCTGTG
AGTATAAGGATGAAGAGACAGCATTAAGTGCTCGTCGTAATCTTCAGGGCTATGAGATCA
ATGGCCGGCAATTACGAGTCGATTTTGCTGAAAATGATAAAGGTGCTGACCGAAATAGAG
AACAGGGTCGTGGTGGGCCTGGGATGGTTGCTAATGTTGAACCTCAAAAACAAGTGGGTG
GACCAGCAATCCTTGGGGATGCTGCTCTGCATCAGCCAGTTGGTCTTCCATTGGCTATGG
CTGCTTCATCTGTCATGGCAGGAGCTCTGGGAGGTGCTCAGGCTGGTAGCAAGTCCAATC
AAAATGGTTTTCAGAGTCAGGCAATGTTGGGAAGTGATCCTTTAACTCTTCATCTAGCAA
AAATGTCTAGAAACCAGCTGAATGAGGTCATTTCTGACCTGAAGGTAATGGCTACAAAAA
ACAAGGAATTAGCAAGACAGCTACTGCTCACAAGCCCACAGTTGCCAAAAGCTCTTTTTC
AGGCGCAGATAATGCTAGGAATGGTGACTCCTCAAGTGTTGCAGATGCCTAATATTCGGC
AGGCTTCAGTTCCACCCACACAGCCTGTGTTACAAGATGGTCAACAGGGTCAGCAGCTAG
CAGTTCAAACTCTTAGTGGGCTACCCCCTCTTGCACAGAGCAAGATGCAGCTTGGGTTGA
TGCCCAAAGGACAAGAAGGCCAAGTGTCTGCCATGCCTCATAATTCTTTGGTTCATAGCC
AGTTTTCTGCACTTCCACAACAGCCGGCACAGCCTCAAATTCAGCTTCCACCCCAAGGCC
ACAACCAAGCTCTACAACAAGCCACATTTGCTGGACAGTCAGGAGTTACGGCGCTTCCAT
CTGTACGCCCACAGCCGCCAGCCAAATTGCCTGTTAGGCCACAAATTCAGGTGGCATCTT
CCTCTTCTTTGAAGCATCAAATGCAACCCCCTTTGTTACAACAACCAGGACAGTTTGGAT
CTGCAAAATCAGGGAATAATAGTCAGCTGGTTATTCCAAATGCAACTCTTCGACCTACAC
TTATGACTCGTCCTTCATTCCCAGATTCAGGCTTTCAGCCTGGTTCCTCAACATTTTCGA
GCATTCCGGAGACAACTAATAACAATGCTGATAGATCTTCTCAAGTTACTAATAACACCT
ATTCAAACATGCCTTCGGGGTTATCTATGAAAAAAAGCATGGCCCGTGATACTTCTGAAC
CAATGAATCACCCTTCAAAAATGGTGAAATTGGATGATGGACGGAGGGCCCCTTTTTCTA
CTGTGGGTTTGAATTTATCTACCAGTTCTGCATCTGCATCTGCATCTGGACCATCCCAAG
TTCTTGGAATTGGCTCAGTCTCTGCAAACCAAATAAGTAAAGCAGAAGAAGTGCAACACA
TGGATAAGAAGGCCCCTCAGGAAATGACAAAGGGATATATTGATAGAAAAAAGGAGTACA
AGAGAAGGATGAAGAATCCTCCCACCAAAGAAAACTAA