Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01620.t01
CDS Infomation

cds chromosome:12X:18_random:2184680:2256721:1 gene:VIT_18s0001g01620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTCTCCTCCCGGCGGCGCCACCGGCACCGCCGCTTTCGGCCTCCAAATTGTCGAAG
GGAAAGCCTTACGCCATCCAGCTCAATGGCTTCAATCGCAAGGTTCCTCTGCCGGTGCGT
CTCAGGAGGACGGTGGTTTGCGGCATTTCCGGCGACGTTGACACATTTACCCAGTACTCC
GGCTACCTTTTTAACCTCAGCTCTTCGGAGGCGGATTCGCTGACAGAGTACGACGTGTCT
AGGATCGGAGCCATTTATCGGAACAGACCCTTGGTTCTGATTCGCCGCCTGTTCCAGATT
GCTACTACGCTTGGGAAGTGGCTAGGGCTTCGCTACATCGATGGTCTCATGGAGCGCTCC
GACCAGATGTTCGAGGTTAGAGCTGCAGAGCTTCGGAAGATATTGGTAGAACTAGGCCCT
GCATATATCAAAATTGCTCAAGCTATCTCATCTCGTCCTGATCTGATTCCACCTTCATAT
CTAGATCAGCTTTCACTTTTGCAAGATCGAATAACACCATTTTCCAATGAAGTTGCTTTC
AATACCATAGAACGAGAACTTGGACTGCCAATTGATAAGCTGTTCTCAGAGATCTCTCCA
GAGCCAGTGGCTGCAGCATCTCTTGGGCAGGTTTATCAAGCTAGGCTTTGTCCTAGTGGT
CAGGTTGTTGCTGTCAAAGTGCAGAGGCCTGGGGTTCAAGCTGCTATTTCCTTGGACATA
TTAATCTTGCGTTTTCTTGCAGGATTGGTTAGGAGAGCAGGCAAATTGAACACTGATCTT
CAGGCAGTTCTTGATGAATGGGCATCAAGTCTTTTCCGGGAGATGGACTATAGAAAAGAA
GCGAAGAATGGGATCAAGTTTAGGCAGCTATATGGTGGCATAAAAGATGTTTTTGTTCCA
GAAATGTACCTGGAGCGAACAACTCGTAGGGTTCTCATTATGGAATGGGTGGAGGGGCAA
AAGTTGACAGAAGTGAAGGATCTTTACCTGATTGAGGTAGGAGTTTACAGCTCATTTAAT
CAACTTCTGGAATATGGGTTCTATCATGCGGATCCACACCCAGGAAACCTTCTTCGTACA
AATGATGGAAAACTAGCTTATTTAGATTTTGGTATGATGGGTGAATTTGAACCAGAACTC
CGAGATGGATTTATTGAAGCCTGTCTCCATCTTGTAAACCGTGATTATGATGCATTGGCT
AAGGACTTCGTCACTCTTGGGCTTCTTCCGCCAACTGCAGACAAGGATGCTGTAACAGAT
GCATTAACTGGTGTCTTTCAAATGGCTGTTGCCAAAGGATTTCGCAATATAAGTTTTGGA
GATCTTTTAGGGAACTTAGGAAGCACCATGTACAAGTTTAAATTCCGGATACCTTCATAT
TTTTCTCTTGTTATTCGAAGCCTTGCTGTTTTGGAGGGAATTGCAATCGGTTTTAACCGA
GATTACAAAGTTTTAGGTAGTACATACCCATGGATTGCTAGAAAAGTTCTAACTGACAGC
TCACCCAAACTGAAGTCTTCTTTGCAGGCTCTTCTTTATAAGGAAGGCGTGTTCAGAATT
GATCGTCTAGAGTCTTTGCTATCAGAGTCTCTTCGTGCCAGAACAGAGAGGGCCTTGGTT
ACAAAACAGATGGAAGGCACTGATTCCCGGTTGGTTGTTAAACAGATTCTTTCTTTTACA
TTAACTGAAAAGGGGACATTTGTGAGAGAAATGCTTCTTGAAGAATTTGCTAAGGGTTTG
GATGCACTTGGCCTAGCAACCCTGGATTCTATTACTTCTGTTACTGCTACAACTCTACCT
TTTTCTGCTTCCCGTCCATTCTCCTCAATGACTGATGATGACATTAACAACTTGAGGACC
TTGCGCCGCCTTCTGCTACTGTTATCAGGACCTCAAAAGACGGAAAGCTCTAGCAAGGGA
GTTAAAGACTCGGAGGAAGTGTCACTGGCTTTTTATCAACTTGCTTCTGTTCAGGAAATT
CTCCCCATCCTTTCTATTATTCCTGAGCTTCCACCAGAATTGCAACAGCAGCTACTCCTA
CTGCCATCAAATCTGGCTGGAAGGTTAATGTCTCGAGTTGCAGCAAGGACGATTCGGAGG
ATATTTTTGTGA

Peptide Sequence

PEP ID

VIT_18s0001g01620.t01
PEP Infomation

pep chromosome:12X:18_random:2184680:2256721:1 gene:VIT_18s0001g01620 transcript:VIT_18s0001g01620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLLLPAAPPAPPLSASKLSKGKPYAIQLNGFNRKVPLPVRLRRTVVCGISGDVDTFTQYS
GYLFNLSSSEADSLTEYDVSRIGAIYRNRPLVLIRRLFQIATTLGKWLGLRYIDGLMERS
DQMFEVRAAELRKILVELGPAYIKIAQAISSRPDLIPPSYLDQLSLLQDRITPFSNEVAF
NTIERELGLPIDKLFSEISPEPVAAASLGQVYQARLCPSGQVVAVKVQRPGVQAAISLDI
LILRFLAGLVRRAGKLNTDLQAVLDEWASSLFREMDYRKEAKNGIKFRQLYGGIKDVFVP
EMYLERTTRRVLIMEWVEGQKLTEVKDLYLIEVGVYSSFNQLLEYGFYHADPHPGNLLRT
NDGKLAYLDFGMMGEFEPELRDGFIEACLHLVNRDYDALAKDFVTLGLLPPTADKDAVTD
ALTGVFQMAVAKGFRNISFGDLLGNLGSTMYKFKFRIPSYFSLVIRSLAVLEGIAIGFNR
DYKVLGSTYPWIARKVLTDSSPKLKSSLQALLYKEGVFRIDRLESLLSESLRARTERALV
TKQMEGTDSRLVVKQILSFTLTEKGTFVREMLLEEFAKGLDALGLATLDSITSVTATTLP
FSASRPFSSMTDDDINNLRTLRRLLLLLSGPQKTESSSKGVKDSEEVSLAFYQLASVQEI
LPILSIIPELPPELQQQLLLLPSNLAGRLMSRVAARTIRRIFL

Transcript Sequence

Transcript ID

VIT_18s0001g01620.t01
Transcript Infomation

cdna chromosome:12X:18_random:2184680:2256721:1 gene:VIT_18s0001g01620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACAAAAGATAGCCGCTAATTCACGCTGTTCGCCAGCAAGCTCAGGAATGCTTCTCCTCC
CGGCGGCGCCACCGGCACCGCCGCTTTCGGCCTCCAAATTGTCGAAGGGAAAGCCTTACG
CCATCCAGCTCAATGGCTTCAATCGCAAGGTTCCTCTGCCGGTGCGTCTCAGGAGGACGG
TGGTTTGCGGCATTTCCGGCGACGTTGACACATTTACCCAGTACTCCGGCTACCTTTTTA
ACCTCAGCTCTTCGGAGGCGGATTCGCTGACAGAGTACGACGTGTCTAGGATCGGAGCCA
TTTATCGGAACAGACCCTTGGTTCTGATTCGCCGCCTGTTCCAGATTGCTACTACGCTTG
GGAAGTGGCTAGGGCTTCGCTACATCGATGGTCTCATGGAGCGCTCCGACCAGATGTTCG
AGGTTAGAGCTGCAGAGCTTCGGAAGATATTGGTAGAACTAGGCCCTGCATATATCAAAA
TTGCTCAAGCTATCTCATCTCGTCCTGATCTGATTCCACCTTCATATCTAGATCAGCTTT
CACTTTTGCAAGATCGAATAACACCATTTTCCAATGAAGTTGCTTTCAATACCATAGAAC
GAGAACTTGGACTGCCAATTGATAAGCTGTTCTCAGAGATCTCTCCAGAGCCAGTGGCTG
CAGCATCTCTTGGGCAGGTTTATCAAGCTAGGCTTTGTCCTAGTGGTCAGGTTGTTGCTG
TCAAAGTGCAGAGGCCTGGGGTTCAAGCTGCTATTTCCTTGGACATATTAATCTTGCGTT
TTCTTGCAGGATTGGTTAGGAGAGCAGGCAAATTGAACACTGATCTTCAGGCAGTTCTTG
ATGAATGGGCATCAAGTCTTTTCCGGGAGATGGACTATAGAAAAGAAGCGAAGAATGGGA
TCAAGTTTAGGCAGCTATATGGTGGCATAAAAGATGTTTTTGTTCCAGAAATGTACCTGG
AGCGAACAACTCGTAGGGTTCTCATTATGGAATGGGTGGAGGGGCAAAAGTTGACAGAAG
TGAAGGATCTTTACCTGATTGAGGTAGGAGTTTACAGCTCATTTAATCAACTTCTGGAAT
ATGGGTTCTATCATGCGGATCCACACCCAGGAAACCTTCTTCGTACAAATGATGGAAAAC
TAGCTTATTTAGATTTTGGTATGATGGGTGAATTTGAACCAGAACTCCGAGATGGATTTA
TTGAAGCCTGTCTCCATCTTGTAAACCGTGATTATGATGCATTGGCTAAGGACTTCGTCA
CTCTTGGGCTTCTTCCGCCAACTGCAGACAAGGATGCTGTAACAGATGCATTAACTGGTG
TCTTTCAAATGGCTGTTGCCAAAGGATTTCGCAATATAAGTTTTGGAGATCTTTTAGGGA
ACTTAGGAAGCACCATGTACAAGTTTAAATTCCGGATACCTTCATATTTTTCTCTTGTTA
TTCGAAGCCTTGCTGTTTTGGAGGGAATTGCAATCGGTTTTAACCGAGATTACAAAGTTT
TAGGTAGTACATACCCATGGATTGCTAGAAAAGTTCTAACTGACAGCTCACCCAAACTGA
AGTCTTCTTTGCAGGCTCTTCTTTATAAGGAAGGCGTGTTCAGAATTGATCGTCTAGAGT
CTTTGCTATCAGAGTCTCTTCGTGCCAGAACAGAGAGGGCCTTGGTTACAAAACAGATGG
AAGGCACTGATTCCCGGTTGGTTGTTAAACAGATTCTTTCTTTTACATTAACTGAAAAGG
GGACATTTGTGAGAGAAATGCTTCTTGAAGAATTTGCTAAGGGTTTGGATGCACTTGGCC
TAGCAACCCTGGATTCTATTACTTCTGTTACTGCTACAACTCTACCTTTTTCTGCTTCCC
GTCCATTCTCCTCAATGACTGATGATGACATTAACAACTTGAGGACCTTGCGCCGCCTTC
TGCTACTGTTATCAGGACCTCAAAAGACGGAAAGCTCTAGCAAGGGAGTTAAAGACTCGG
AGGAAGTGTCACTGGCTTTTTATCAACTTGCTTCTGTTCAGGAAATTCTCCCCATCCTTT
CTATTATTCCTGAGCTTCCACCAGAATTGCAACAGCAGCTACTCCTACTGCCATCAAATC
TGGCTGGAAGGTTAATGTCTCGAGTTGCAGCAAGGACGATTCGGAGGATATTTTTGTGAC
AGCCATCCAATTCTAAAATGTTG