Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01490.t01
CDS Infomation

cds chromosome:12X:18_random:2054520:2056601:-1 gene:VIT_18s0001g01490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGAATCGCCGATCCAATTCGGGATTTTGGGCTGCGCCGACATAGCACGCAAGGTA
TCGAGAGCGATAACGCTCGCCCCCAACGCCACGCTGTACGCCGTCGGCAGCCGTTCGCTG
GAGAAGGCTACGAGATTCGCCGCCGCCAACGGATTCCCTCCCTCGGCTAAGATTTACGGC
AGCTACGAGGCGGTGCTGGACGACCCCGACGTGGATGCCGTGTACGTGCCGCTGCCGACG
AGCTTGCACTTGAAGTGGGCGGTGCTGGCGGCGGAGAAGAAGAAGCATGTGCTTCTGGAG
AAGCCTGTGGCTCTGAATGTGGCGGAGTTGGATCAGATTTTGGAGGCGTGCGAATCCAAT
GGAGTGCAGTTTATGGACGGCACGATGTGGATGCACCACCCTCGGACGGCTAAGATGAAG
GAGTTTCTCTCCGATCCACAGCGTTTCGGACAACTCAAATCGGTGCAATCCTGCTTTACA
TTTTTGGCTGCTTCTGATTTTCATGAGAATAACATTCGTGTTAAGCCAGACCTTGATGCC
CTTGGTGTTCTTGGTGATACTGGGTGGTACTGCATCAGGGCAATCCTGTTTGTTGCTGAC
TATGAACTGCCTAAATCAGTGAGAGCTTTGCCTGGTCCTGTTCTTAATAAAACAGGGGTA
CTCAAATCATGCGGGGCTTCTCTAATATGGGAAGATGGGAAAGTAGCAACCTTCACTTGC
TCCTTCGAAGCCAATTTGACAATGAGTTTAACTGCTGTTGGAACAAAGGGAACTTTGCAG
GTTCAGGACTTCGTTATTCCTTTTAAAGAGGACAGGGCTGCTTTTTCCGCTGGTATAGAG
TCGTGGTTCAATGAACTCGTGACAGGGTGGAGAACAATGCCAAGCGAGCATGTCGTCACA
ACAGATCTCCCTCAGGAAGCTCTCATGGTGAGGGAATTTTCCGGTTTGGTTGCAGACATT
AAAAGAAATGGTTCAAAACCTGAACAAAAGTGGCCAACTCTCAGTAGGAAGACGCAGCTG
GTGCTGGATGCTGTGAAGGCCTCAATCGAGAGGGGGCTTGAGCCTGTTGAGGTGTAG

Peptide Sequence

PEP ID

VIT_18s0001g01490.t01
PEP Infomation

pep chromosome:12X:18_random:2054520:2056601:-1 gene:VIT_18s0001g01490 transcript:VIT_18s0001g01490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAESPIQFGILGCADIARKVSRAITLAPNATLYAVGSRSLEKATRFAAANGFPPSAKIYG
SYEAVLDDPDVDAVYVPLPTSLHLKWAVLAAEKKKHVLLEKPVALNVAELDQILEACESN
GVQFMDGTMWMHHPRTAKMKEFLSDPQRFGQLKSVQSCFTFLAASDFHENNIRVKPDLDA
LGVLGDTGWYCIRAILFVADYELPKSVRALPGPVLNKTGVLKSCGASLIWEDGKVATFTC
SFEANLTMSLTAVGTKGTLQVQDFVIPFKEDRAAFSAGIESWFNELVTGWRTMPSEHVVT
TDLPQEALMVREFSGLVADIKRNGSKPEQKWPTLSRKTQLVLDAVKASIERGLEPVEV

Transcript Sequence

Transcript ID

VIT_18s0001g01490.t01
Transcript Infomation

cdna chromosome:12X:18_random:2054520:2056601:-1 gene:VIT_18s0001g01490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCTTCATCGATACGCTCTCTCTAATTCCCAAACGACATGGCCGAATCGCCGATCCAATT
CGGGATTTTGGGCTGCGCCGACATAGCACGCAAGGTATCGAGAGCGATAACGCTCGCCCC
CAACGCCACGCTGTACGCCGTCGGCAGCCGTTCGCTGGAGAAGGCTACGAGATTCGCCGC
CGCCAACGGATTCCCTCCCTCGGCTAAGATTTACGGCAGCTACGAGGCGGTGCTGGACGA
CCCCGACGTGGATGCCGTGTACGTGCCGCTGCCGACGAGCTTGCACTTGAAGTGGGCGGT
GCTGGCGGCGGAGAAGAAGAAGCATGTGCTTCTGGAGAAGCCTGTGGCTCTGAATGTGGC
GGAGTTGGATCAGATTTTGGAGGCGTGCGAATCCAATGGAGTGCAGTTTATGGACGGCAC
GATGTGGATGCACCACCCTCGGACGGCTAAGATGAAGGAGTTTCTCTCCGATCCACAGCG
TTTCGGACAACTCAAATCGGTGCAATCCTGCTTTACATTTTTGGCTGCTTCTGATTTTCA
TGAGAATAACATTCGTGTTAAGCCAGACCTTGATGCCCTTGGTGTTCTTGGTGATACTGG
GTGGTACTGCATCAGGGCAATCCTGTTTGTTGCTGACTATGAACTGCCTAAATCAGTGAG
AGCTTTGCCTGGTCCTGTTCTTAATAAAACAGGGGTACTCAAATCATGCGGGGCTTCTCT
AATATGGGAAGATGGGAAAGTAGCAACCTTCACTTGCTCCTTCGAAGCCAATTTGACAAT
GAGTTTAACTGCTGTTGGAACAAAGGGAACTTTGCAGGTTCAGGACTTCGTTATTCCTTT
TAAAGAGGACAGGGCTGCTTTTTCCGCTGGTATAGAGTCGTGGTTCAATGAACTCGTGAC
AGGGTGGAGAACAATGCCAAGCGAGCATGTCGTCACAACAGATCTCCCTCAGGAAGCTCT
CATGGTGAGGGAATTTTCCGGTTTGGTTGCAGACATTAAAAGAAATGGTTCAAAACCTGA
ACAAAAGTGGCCAACTCTCAGTAGGAAGACGCAGCTGGTGCTGGATGCTGTGAAGGCCTC
AATCGAGAGGGGGCTTGAGCCTGTTGAGGTGTAGTGGGTTGATAAAACTTTCCCATCCAG
TGCTCTGTTTGCTTGGTTTTTAGTGTCTTGGGTTTGATTAGTGCTGCTTTTGAATGAACC
TTGCTGAACGCTGCCTAATTAATAAATAAAGAAGGCTTGGAACGCTTGCCATTCTACTCT
TTTTCTGCCTGCATAATCAATGGGACAAGTCTTCCTCTTCCTCAACGTGAAGTTATAGAC
AACTCCAGTAGTGGCCATGTTGAACTGGTTCTACGATTCAAGTCATCTAA