Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01390.t01
CDS Infomation

cds chromosome:12X:18:1982983:1985445:-1 gene:VIT_18s0001g01390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGGGTGCTTCTACGCTCCTGTGCCCTCCATTGGAGCTCACAGATAAGAAAGAA
CATGGGGTTTCTCCATCTGACTCATCTTTTTTTAAAAAACAACCCAACATTCCTATGGAA
TTCATTTGGGCAAAAGGGGAAGTGGGTCATGCTCATGAAGAGCTCAGAGAGCCGGTGGTG
GATCTTGAGGGGTTCTTTTCAGGTGATGAGGTGGCTACACAGCATGCTGCCATGCTTGTT
AGGTCAGCTTGCTTGAACCACGGCTTCTTCCAAGTGATCAACCATCGGGTCGATCCACAC
CTCATTACTGTTGCACATGACCATATGGAGGCATTTTTTAAGCTGCCATGGTCCAAGAAA
CTGAGGGCTCAGAGGAAACCTGGTAGTCTATGGGGTTATTCGGGTGCCCACGCTGATCGT
TTTTCATTGAAATTGCCATGGAAGGAAACCTTATCTTTTGGTTTCCATGAGAATGGCTCT
GAATCTGTTGTGGAAGATTTCTTCAAGTCCACCTTAGGGGAAGAATTTGAGCAGACAGGA
TTAGTCTATCAAAAATATTGTCAAGCGATGAAGGACTTATCCCTCGTCCTGATGGAACTT
TTAGCCATCAGCTTGGGAGTAGATCGCTTACATTATAGAAAATTCTTCGAAGATGGTAGT
TCTATAATGAGATGCAACTACTATCCACCTTGCCAAGAGCCAGGCCTCGCCTTTGGCACA
GGACCACATTGTGATCCAACCTCCCTGACCATTCTCCATCAGGATCAAGTTGGAGGCCTT
GAAGTCTATGTGAACAACAAATGGAGGACCATCCGCCCTCGATGCGATGCCCTAGTTATC
AATCTTGGTGACACATTTAAGGCACTATCTAATGGAAGATACAAGAGTTGCCTTCACAGG
GCTGTGGTGAACAGGTACAAGGAGAGGAGATCACTGGTGTTCTTCGTGTGCCCTAGAGAG
AACAAGGTGGTGACTCCCCCACAGGATCTTGTTTGCAGAGAAGGGACAAGGAAGTACCCG
GATTTCAAATGGTCAGATTTGCTTGAATTCACACAAAAGTACTACAGAGCTGACGATGCT
ACCCTCCAAAACTTTACCAAATGGCTTCTATCCTCCAATCCTCCTAACCACCACTAG

Peptide Sequence

PEP ID

VIT_18s0001g01390.t01
PEP Infomation

pep chromosome:12X:18:1982983:1985445:-1 gene:VIT_18s0001g01390 transcript:VIT_18s0001g01390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLGASTLLCPPLELTDKKEHGVSPSDSSFFKKQPNIPMEFIWAKGEVGHAHEELREPVV
DLEGFFSGDEVATQHAAMLVRSACLNHGFFQVINHRVDPHLITVAHDHMEAFFKLPWSKK
LRAQRKPGSLWGYSGAHADRFSLKLPWKETLSFGFHENGSESVVEDFFKSTLGEEFEQTG
LVYQKYCQAMKDLSLVLMELLAISLGVDRLHYRKFFEDGSSIMRCNYYPPCQEPGLAFGT
GPHCDPTSLTILHQDQVGGLEVYVNNKWRTIRPRCDALVINLGDTFKALSNGRYKSCLHR
AVVNRYKERRSLVFFVCPRENKVVTPPQDLVCREGTRKYPDFKWSDLLEFTQKYYRADDA
TLQNFTKWLLSSNPPNHH

Transcript Sequence

Transcript ID

VIT_18s0001g01390.t01
Transcript Infomation

cdna chromosome:12X:18:1982983:1985445:-1 gene:VIT_18s0001g01390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGGGTGCTTCTACGCTCCTGTGCCCTCCATTGGAGCTCACAGATAAGAAAGAA
CATGGGGTTTCTCCATCTGACTCATCTTTTTTTAAAAAACAACCCAACATTCCTATGGAA
TTCATTTGGGCAAAAGGGGAAGTGGGTCATGCTCATGAAGAGCTCAGAGAGCCGGTGGTG
GATCTTGAGGGGTTCTTTTCAGGTGATGAGGTGGCTACACAGCATGCTGCCATGCTTGTT
AGGTCAGCTTGCTTGAACCACGGCTTCTTCCAAGTGATCAACCATCGGGTCGATCCACAC
CTCATTACTGTTGCACATGACCATATGGAGGCATTTTTTAAGCTGCCATGGTCCAAGAAA
CTGAGGGCTCAGAGGAAACCTGGTAGTCTATGGGGTTATTCGGGTGCCCACGCTGATCGT
TTTTCATTGAAATTGCCATGGAAGGAAACCTTATCTTTTGGTTTCCATGAGAATGGCTCT
GAATCTGTTGTGGAAGATTTCTTCAAGTCCACCTTAGGGGAAGAATTTGAGCAGACAGGA
TTAGTCTATCAAAAATATTGTCAAGCGATGAAGGACTTATCCCTCGTCCTGATGGAACTT
TTAGCCATCAGCTTGGGAGTAGATCGCTTACATTATAGAAAATTCTTCGAAGATGGTAGT
TCTATAATGAGATGCAACTACTATCCACCTTGCCAAGAGCCAGGCCTCGCCTTTGGCACA
GGACCACATTGTGATCCAACCTCCCTGACCATTCTCCATCAGGATCAAGTTGGAGGCCTT
GAAGTCTATGTGAACAACAAATGGAGGACCATCCGCCCTCGATGCGATGCCCTAGTTATC
AATCTTGGTGACACATTTAAGGCACTATCTAATGGAAGATACAAGAGTTGCCTTCACAGG
GCTGTGGTGAACAGGTACAAGGAGAGGAGATCACTGGTGTTCTTCGTGTGCCCTAGAGAG
AACAAGGTGGTGACTCCCCCACAGGATCTTGTTTGCAGAGAAGGGACAAGGAAGTACCCG
GATTTCAAATGGTCAGATTTGCTTGAATTCACACAAAAGTACTACAGAGCTGACGATGCT
ACCCTCCAAAACTTTACCAAATGGCTTCTATCCTCCAATCCTCCTAACCACCACTAGTCT
ACCTCATTTTCTATCCTCCTTATCTACCTAATCTCTATCTTTGTTGTTATTGGTTCGCAT
CTTATCTTCTTTTGAGGGGTTTATTATAAACAATTCCCCAAATTAATCAAAAGTGGCTGC
TCAT