Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_18s0001g01380.t01
CDS Infomation

cds chromosome:12X:18_random:1977137:1983379:-1 gene:VIT_18s0001g01380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGAAACGCCGATCCAATTCGGGATTTTGGGCTGCGCCGAAATAGCACGCAAGGTA
TCGAGAGCGATAACGCTCGCCCCCAACGCCACGCTGTACGCCGTCGGCAGCCGTTCGCTG
GAGAAGGCCAGGAGGTTCGCCGCCGCAAACGGATTCCCTCCCTCGGCTAAGATTTACGGC
AGCTACGAGGCGGTGCTGGACGACCCCGGCGTGGACGCCGTGTACGTGCCGCTGCCCACG
AGCTTGCACTTGAAGTGGGCTGTGCTGGCGGCGGAGAAGAAGAAGCATGTGCTTCTGGAG
AAGCCTGTGGCTCTGAATGTGGCGGAGTTGGATCAGATCTTGGAGGCGTGCGAATCCAAT
GGAGTGCAGTTTATGGACGGTACGATGTGGATGCACCACCCTCGGACGGCTAAGATGAAG
GAGCTCCTCTCCGATCCGCAGCGTTTTGGTCAACTCAAATCGGTGCAATCCTGCTTCACA
TATTTGGCTACTTCTGATTTTCATGAGAATAACATTCGTGTTAAGCCAGACCTTGATGCC
CTTGGTGCTCTTGGTGATGTTGGGTGGTACTGCATTAGGGCAATCCTGTTTGCTGTTGAC
TATGAACTGCCTAAATCAGTGAAAGCTTTGCCTGGGACTGTTTTCAATGAAGCAGGGGTA
CTTACATCATGCGGGGCTTCTCTACTATGGGAAGATGGCAAAGTAGCAACCTTCAATTGC
TCCTTCCAAGCCAATTTGACAATGAATATAACTGCTATTGGAACAAAGGGAACTTTGCAG
GTTCAGGACTTCGTTATTCCTGTTAAAGAGGACAGTGCCGCTTTTTCTGCTGGTATAGAG
TCTTGGTTCAATGACCTCGTGACAGGGTGGAAAACAATGCCAAGCGAGCATGTCGTCACA
ACAGATCTTCCTCAGGAGGCTCTCATGGTGAAAGAATTTTCCGGTTTGGTTGCAGACATT
AAAAGAAATGGTTCAAAACTTGAGCAAAAGTGGCCAACTCTCAGTCGGAAGACACAGCTG
GTGCTGGATGCTGTGAAGGTCTCAATCGAGAGGGGGCTTGAGCCCGTTGAGCTTTAG

Peptide Sequence

PEP ID

VIT_18s0001g01380.t01
PEP Infomation

pep chromosome:12X:18_random:1977137:1983379:-1 gene:VIT_18s0001g01380 transcript:VIT_18s0001g01380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAETPIQFGILGCAEIARKVSRAITLAPNATLYAVGSRSLEKARRFAAANGFPPSAKIYG
SYEAVLDDPGVDAVYVPLPTSLHLKWAVLAAEKKKHVLLEKPVALNVAELDQILEACESN
GVQFMDGTMWMHHPRTAKMKELLSDPQRFGQLKSVQSCFTYLATSDFHENNIRVKPDLDA
LGALGDVGWYCIRAILFAVDYELPKSVKALPGTVFNEAGVLTSCGASLLWEDGKVATFNC
SFQANLTMNITAIGTKGTLQVQDFVIPVKEDSAAFSAGIESWFNDLVTGWKTMPSEHVVT
TDLPQEALMVKEFSGLVADIKRNGSKLEQKWPTLSRKTQLVLDAVKVSIERGLEPVEL

Transcript Sequence

Transcript ID

VIT_18s0001g01380.t01
Transcript Infomation

cdna chromosome:12X:18_random:1977137:1983379:-1 gene:VIT_18s0001g01380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTCCGATTCCCAAACGACATGGCCGAAACGCCGATCCAATTCGGGATTTTGGGCTG
CGCCGAAATAGCACGCAAGGTATCGAGAGCGATAACGCTCGCCCCCAACGCCACGCTGTA
CGCCGTCGGCAGCCGTTCGCTGGAGAAGGCCAGGAGGTTCGCCGCCGCAAACGGATTCCC
TCCCTCGGCTAAGATTTACGGCAGCTACGAGGCGGTGCTGGACGACCCCGGCGTGGACGC
CGTGTACGTGCCGCTGCCCACGAGCTTGCACTTGAAGTGGGCTGTGCTGGCGGCGGAGAA
GAAGAAGCATGTGCTTCTGGAGAAGCCTGTGGCTCTGAATGTGGCGGAGTTGGATCAGAT
CTTGGAGGCGTGCGAATCCAATGGAGTGCAGTTTATGGACGGTACGATGTGGATGCACCA
CCCTCGGACGGCTAAGATGAAGGAGCTCCTCTCCGATCCGCAGCGTTTTGGTCAACTCAA
ATCGGTGCAATCCTGCTTCACATATTTGGCTACTTCTGATTTTCATGAGAATAACATTCG
TGTTAAGCCAGACCTTGATGCCCTTGGTGCTCTTGGTGATGTTGGGTGGTACTGCATTAG
GGCAATCCTGTTTGCTGTTGACTATGAACTGCCTAAATCAGTGAAAGCTTTGCCTGGGAC
TGTTTTCAATGAAGCAGGGGTACTTACATCATGCGGGGCTTCTCTACTATGGGAAGATGG
CAAAGTAGCAACCTTCAATTGCTCCTTCCAAGCCAATTTGACAATGAATATAACTGCTAT
TGGAACAAAGGGAACTTTGCAGGTTCAGGACTTCGTTATTCCTGTTAAAGAGGACAGTGC
CGCTTTTTCTGCTGGTATAGAGTCTTGGTTCAATGACCTCGTGACAGGGTGGAAAACAAT
GCCAAGCGAGCATGTCGTCACAACAGATCTTCCTCAGGAGGCTCTCATGGTGAAAGAATT
TTCCGGTTTGGTTGCAGACATTAAAAGAAATGGTTCAAAACTTGAGCAAAAGTGGCCAAC
TCTCAGTCGGAAGACACAGCTGGTGCTGGATGCTGTGAAGGTCTCAATCGAGAGGGGGCT
TGAGCCCGTTGAGCTTTAGTGGTTTGATAAAACTTTCCCATCCTATGTTTGGTTTTTAGT
GCCTTGGACTTGATGAGTGCTTCTTTTGAATGAACTTTGCTGGACGTTGCTAAATTAGTA
AGTAAAGAAGGCTTGTTTCTATGTTATATACA